RNA–Protein interactions for RNA: ENST00000434424.5

PTPRK-212, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 3

Gene PTPRK, Length 555 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-212ENST00000434424 RFX1P22670 979 aa12.09□□□□□ -0.47
PTPRK-212ENST00000434424 EHBP1Q8NDI1 1231 aa12.09□□□□□ -0.47
PTPRK-212ENST00000434424 USTQ9Y2C2 406 aa12.09□□□□□ -0.47
PTPRK-212ENST00000434424 BRD1O95696 1058 aa12.07□□□□□ -0.48
PTPRK-212ENST00000434424 KCNA1Q09470 495 aa12.07□□□□□ -0.48
PTPRK-212ENST00000434424 EVA1BQ9NVM1 165 aa12.07□□□□□ -0.48
PTPRK-212ENST00000434424 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP12.06□□□□□ -0.48
PTPRK-212ENST00000434424 PTPRNQ16849 979 aa12.06□□□□□ -0.48
PTPRK-212ENST00000434424 ADAMTS19Q8TE59 1207 aa12.06□□□□□ -0.48
PTPRK-212ENST00000434424 KIFC2Q96AC6 838 aa12.06□□□□□ -0.48
PTPRK-212ENST00000434424 UNC93B1Q9H1C4 597 aa12.06□□□□□ -0.48
PTPRK-212ENST00000434424 CFAP70Q5T0N1 1121 aa12.05□□□□□ -0.48
PTPRK-212ENST00000434424 TRIM46Q7Z4K8 759 aa12.05□□□□□ -0.48
PTPRK-212ENST00000434424 PRR7Q8TB68 274 aa12.05□□□□□ -0.48
PTPRK-212ENST00000434424 BMP1P13497 986 aa12.04□□□□□ -0.48
PTPRK-212ENST00000434424 BAP1Q92560 729 aa12.04□□□□□ -0.48
PTPRK-212ENST00000434424 LINC01559Q495D7 138 aa12.03□□□□□ -0.48
PTPRK-212ENST00000434424 PPP1R12CQ9BZL4 782 aa12.03□□□□□ -0.48
PTPRK-212ENST00000434424 CTDSPL2Q05D32 466 aa12.02□□□□□ -0.49
PTPRK-212ENST00000434424 KCNH2Q12809 1159 aa12.02□□□□□ -0.49
PTPRK-212ENST00000434424 TLL2Q9Y6L7 1015 aa12.02□□□□□ -0.49
PTPRK-212ENST00000434424 WASF2Q9Y6W5 498 aa12.02□□□□□ -0.49
PTPRK-212ENST00000434424 CAPN5O15484 640 aaPredicted RBP12.01□□□□□ -0.49
PTPRK-212ENST00000434424 VAC14Q08AM6 782 aa12.01□□□□□ -0.49
PTPRK-212ENST00000434424 MTMR2Q13614 643 aa12.01□□□□□ -0.49
PTPRK-212ENST00000434424 HELBQ8NG08 1087 aaPredicted RBP12.01□□□□□ -0.49
PTPRK-212ENST00000434424 HMX1Q9NP08 348 aaPredicted RBP12.01□□□□□ -0.49
PTPRK-212ENST00000434424 SRPK2P78362 688 aaKnown RBP12□□□□□ -0.49
PTPRK-212ENST00000434424 FOXD4L5Q5VV16 416 aaPredicted RBP12□□□□□ -0.49
PTPRK-212ENST00000434424 DESI1Q6ICB0 168 aa12□□□□□ -0.49
PTPRK-212ENST00000434424 FOXD4L4Q8WXT5 416 aaPredicted RBP12□□□□□ -0.49
PTPRK-212ENST00000434424 TRIM34Q9BYJ4 488 aa12□□□□□ -0.49
PTPRK-212ENST00000434424 ZNF511Q8NB15 262 aa11.99□□□□□ -0.49
PTPRK-212ENST00000434424 TSC1Q92574 1164 aa11.98□□□□□ -0.49
PTPRK-212ENST00000434424 ALG2Q9H553 416 aa11.98□□□□□ -0.49
PTPRK-212ENST00000434424 STK17AQ9UEE5 414 aa11.98□□□□□ -0.49
PTPRK-212ENST00000434424 PALM3A6NDB9 673 aaPredicted RBP11.97□□□□□ -0.49
PTPRK-212ENST00000434424 RBM25P49756 843 aaKnown RBP11.97□□□□□ -0.49
PTPRK-212ENST00000434424 INSM1Q01101 510 aaPredicted RBP11.97□□□□□ -0.49
PTPRK-212ENST00000434424 GPR37L1O60883 481 aa11.96□□□□□ -0.49
PTPRK-212ENST00000434424 LMOD1P29536 600 aaPredicted RBP11.96□□□□□ -0.49
PTPRK-212ENST00000434424 CFAP99D6REC4 459 aa11.95□□□□□ -0.5
PTPRK-212ENST00000434424 SOX11P35716 441 aa11.95□□□□□ -0.5
PTPRK-212ENST00000434424 VARSP26640 1264 aaKnown RBP11.94□□□□□ -0.5
PTPRK-212ENST00000434424 LYPD8Q6UX82 237 aa11.94□□□□□ -0.5
PTPRK-212ENST00000434424 MPNDQ8N594 471 aa11.94□□□□□ -0.5
PTPRK-212ENST00000434424 LRRN4Q8WUT4 740 aa11.94□□□□□ -0.5
PTPRK-212ENST00000434424 NXF1Q9UBU9 619 aaKnown RBP11.94□□□□□ -0.5
PTPRK-212ENST00000434424 TFIP11Q9UBB9 837 aaKnown RBP11.93□□□□□ -0.5
PTPRK-212ENST00000434424 NNTQ13423 1086 aa11.92□□□□□ -0.5
PTPRK-212ENST00000434424 ZFP42Q96MM3 310 aa11.92□□□□□ -0.5
PTPRK-212ENST00000434424 CARNS1A5YM72 827 aa11.91□□□□□ -0.5
PTPRK-212ENST00000434424 VRTNQ9H8Y1 702 aa11.91□□□□□ -0.5
PTPRK-212ENST00000434424 ATG7O95352 703 aa11.9□□□□□ -0.5
PTPRK-212ENST00000434424 F12P00748 615 aaPredicted RBP11.9□□□□□ -0.5
PTPRK-212ENST00000434424 VEGFBP49765 207 aa11.9□□□□□ -0.5
PTPRK-212ENST00000434424 SEMA3FQ13275 785 aa11.9□□□□□ -0.5
PTPRK-212ENST00000434424 KLF16Q9BXK1 252 aaPredicted RBP11.9□□□□□ -0.5
PTPRK-212ENST00000434424 MAP10Q9P2G4 905 aa11.9□□□□□ -0.5
PTPRK-212ENST00000434424 IVNS1ABPQ9Y6Y0 642 aa11.9□□□□□ -0.5
PTPRK-212ENST00000434424 TIMP2P16035 220 aa11.89□□□□□ -0.51
PTPRK-212ENST00000434424 LORP23490 312 aaPredicted RBP11.89□□□□□ -0.51
PTPRK-212ENST00000434424 CTHP32929 405 aa11.89□□□□□ -0.51
PTPRK-212ENST00000434424 PNMA1Q8ND90 353 aa11.89□□□□□ -0.51
PTPRK-212ENST00000434424 UCN2Q96RP3 112 aa11.89□□□□□ -0.51
PTPRK-212ENST00000434424 GMPRP36959 345 aa11.88□□□□□ -0.51
PTPRK-212ENST00000434424 CCDC27Q2M243 656 aa11.88□□□□□ -0.51
PTPRK-212ENST00000434424 CDCA8Q53HL2 280 aa11.88□□□□□ -0.51
PTPRK-212ENST00000434424 EPS8L1Q8TE68 723 aa11.88□□□□□ -0.51
PTPRK-212ENST00000434424 SLC16A10Q8TF71 515 aa11.88□□□□□ -0.51
PTPRK-212ENST00000434424 FOXJ1Q92949 421 aa11.88□□□□□ -0.51
PTPRK-212ENST00000434424 ZNF428Q96B54 188 aa11.88□□□□□ -0.51
PTPRK-212ENST00000434424 H3BM21 787 aa11.86□□□□□ -0.51
PTPRK-212ENST00000434424 NPAS3Q8IXF0 933 aa11.86□□□□□ -0.51
PTPRK-212ENST00000434424 MAFBQ9Y5Q3 323 aaPredicted RBP11.86□□□□□ -0.51
PTPRK-212ENST00000434424 ERBB4Q15303 1308 aa11.86□□□□□ -0.51
PTPRK-212ENST00000434424 E9PSI1 815 aa11.85□□□□□ -0.51
PTPRK-212ENST00000434424 PER1O15534 1290 aaPredicted RBP11.85□□□□□ -0.51
PTPRK-212ENST00000434424 ADH1CP00326 375 aa11.85□□□□□ -0.51
PTPRK-212ENST00000434424 WDR4P57081 412 aaKnown RBP11.85□□□□□ -0.51
PTPRK-212ENST00000434424 C4orf48Q5BLP8 95 aa11.85□□□□□ -0.51
PTPRK-212ENST00000434424 MRPL14Q6P1L8 145 aaKnown RBP11.85□□□□□ -0.51
PTPRK-212ENST00000434424 CDK15Q96Q40 435 aa11.85□□□□□ -0.51
PTPRK-212ENST00000434424 TMEM88BA6NKF7 163 aa11.84□□□□□ -0.51
PTPRK-212ENST00000434424 NR6A1Q15406 480 aa11.84□□□□□ -0.51
PTPRK-212ENST00000434424 SND1Q7KZF4 910 aaKnown RBP eCLIP11.84□□□□□ -0.51
PTPRK-212ENST00000434424 FAM174AQ8TBP5 190 aa11.84□□□□□ -0.51
PTPRK-212ENST00000434424 EIF4G2P78344 907 aaKnown RBP eCLIP11.83□□□□□ -0.52
PTPRK-212ENST00000434424 PURBQ96QR8 312 aaKnown RBP11.83□□□□□ -0.52
PTPRK-212ENST00000434424 B4GALNT3Q6L9W6 998 aa11.82□□□□□ -0.52
PTPRK-212ENST00000434424 TBC1D9Q6ZT07 1266 aa11.82□□□□□ -0.52
PTPRK-212ENST00000434424 IRF7Q92985 503 aa11.82□□□□□ -0.52
PTPRK-212ENST00000434424 AMOTL2Q9Y2J4 779 aa11.82□□□□□ -0.52
PTPRK-212ENST00000434424 SOBPA7XYQ1 873 aa11.81□□□□□ -0.52
PTPRK-212ENST00000434424 NR3C2P08235 984 aa11.81□□□□□ -0.52
PTPRK-212ENST00000434424 ATP9BO43861 1147 aa11.8□□□□□ -0.52
PTPRK-212ENST00000434424 ZFAND3Q9H8U3 227 aa11.8□□□□□ -0.52
PTPRK-212ENST00000434424 GRM5P41594 1212 aa11.79□□□□□ -0.52
PTPRK-212ENST00000434424 ARID5BQ14865 1188 aa11.79□□□□□ -0.52
PTPRK-212ENST00000434424 ITPKCQ96DU7 683 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms