RNA–Protein interactions for RNA: ENST00000434316.6

TMCO3-202, Transcript of transmembrane and coiled-coil domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMCO3, Length 3,050 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO3-202ENST00000434316 RAPGEF3O95398 923 aa18.6■□□□□ 0.57
TMCO3-202ENST00000434316 CDK19Q9BWU1 502 aa18.6■□□□□ 0.57
TMCO3-202ENST00000434316 POLKQ9UBT6 870 aa18.6■□□□□ 0.57
TMCO3-202ENST00000434316 NFE2L2Q16236 605 aa18.59■□□□□ 0.57
TMCO3-202ENST00000434316 PTCH1Q13635 1447 aa18.59■□□□□ 0.57
TMCO3-202ENST00000434316 MYO5BQ9ULV0 1848 aa18.59■□□□□ 0.57
TMCO3-202ENST00000434316 PIK3R4Q99570 1358 aa18.58■□□□□ 0.56
TMCO3-202ENST00000434316 GSPT1P15170 499 aaKnown RBP18.58■□□□□ 0.56
TMCO3-202ENST00000434316 SKOR2Q2VWA4 1001 aaPredicted RBP18.58■□□□□ 0.56
TMCO3-202ENST00000434316 ZNF428Q96B54 188 aa18.58■□□□□ 0.56
TMCO3-202ENST00000434316 TRIM44Q96DX7 344 aaPredicted RBP18.58■□□□□ 0.56
TMCO3-202ENST00000434316 MBIPQ9NS73 344 aa18.58■□□□□ 0.56
TMCO3-202ENST00000434316 YTHDC2Q9H6S0 1430 aaKnown RBP18.57■□□□□ 0.56
TMCO3-202ENST00000434316 ZFYVE9O95405 1425 aa18.57■□□□□ 0.56
TMCO3-202ENST00000434316 ARHGAP45Q92619 1136 aa18.57■□□□□ 0.56
TMCO3-202ENST00000434316 ABCC4O15439 1325 aa18.56■□□□□ 0.56
TMCO3-202ENST00000434316 AK9Q5TCS8 1911 aa18.56■□□□□ 0.56
TMCO3-202ENST00000434316 CDC42BPGQ6DT37 1551 aa18.56■□□□□ 0.56
TMCO3-202ENST00000434316 CDC45O75419 566 aa18.55■□□□□ 0.56
TMCO3-202ENST00000434316 KIF20BQ96Q89 1820 aa18.55■□□□□ 0.56
TMCO3-202ENST00000434316 C8orf58Q8NAV2 365 aa18.55■□□□□ 0.56
TMCO3-202ENST00000434316 EMILIN1Q9Y6C2 1016 aa18.55■□□□□ 0.56
TMCO3-202ENST00000434316 CLTCQ00610 1675 aaKnown RBP18.55■□□□□ 0.56
TMCO3-202ENST00000434316 TWISTNBQ3B726 338 aaPredicted RBP18.54■□□□□ 0.56
TMCO3-202ENST00000434316 CHMP4BQ9H444 224 aaKnown RBP18.54■□□□□ 0.56
TMCO3-202ENST00000434316 BAG4O95429 457 aaKnown RBP18.53■□□□□ 0.56
TMCO3-202ENST00000434316 GNAI1P63096 354 aa18.53■□□□□ 0.56
TMCO3-202ENST00000434316 IFT57Q9NWB7 429 aa18.53■□□□□ 0.56
TMCO3-202ENST00000434316 NPM1P06748 294 aaKnown RBP eCLIP18.53■□□□□ 0.56
TMCO3-202ENST00000434316 PLEKHM2Q8IWE5 1019 aa18.53■□□□□ 0.56
TMCO3-202ENST00000434316 C16orf71Q8IYS4 520 aaPredicted RBP18.53■□□□□ 0.56
TMCO3-202ENST00000434316 ZNF853P0CG23 659 aa18.53■□□□□ 0.56
TMCO3-202ENST00000434316 SLC52A1Q9NWF4 448 aa18.53■□□□□ 0.56
TMCO3-202ENST00000434316 ARHGEF40Q8TER5 1519 aa18.52■□□□□ 0.56
TMCO3-202ENST00000434316 FAM83GA6ND36 823 aa18.52■□□□□ 0.56
TMCO3-202ENST00000434316 PTMSP20962 102 aa18.52■□□□□ 0.55
TMCO3-202ENST00000434316 DDX49Q9Y6V7 483 aaKnown RBP18.52■□□□□ 0.55
TMCO3-202ENST00000434316 ZRANB1Q9UGI0 708 aa18.51■□□□□ 0.55
TMCO3-202ENST00000434316 MAP2P11137 1827 aaKnown RBP18.51■□□□□ 0.55
TMCO3-202ENST00000434316 DCTN1Q14203 1278 aa18.51■□□□□ 0.55
TMCO3-202ENST00000434316 WAPLQ7Z5K2 1190 aa18.51■□□□□ 0.55
TMCO3-202ENST00000434316 KNDC1Q76NI1 1749 aa18.5■□□□□ 0.55
TMCO3-202ENST00000434316 ARHGAP31Q2M1Z3 1444 aa18.5■□□□□ 0.55
TMCO3-202ENST00000434316 GOLGA6L22H0YM25 854 aa18.5■□□□□ 0.55
TMCO3-202ENST00000434316 CALD1Q05682 793 aaKnown RBP18.5■□□□□ 0.55
TMCO3-202ENST00000434316 OTUD7AQ8TE49 926 aaPredicted RBP18.5■□□□□ 0.55
TMCO3-202ENST00000434316 IL13P35225 146 aa18.5■□□□□ 0.55
TMCO3-202ENST00000434316 NASPP49321 788 aaPredicted RBP18.5■□□□□ 0.55
TMCO3-202ENST00000434316 TMEM131LA2VDJ0 1609 aa18.49■□□□□ 0.55
TMCO3-202ENST00000434316 PKP1Q13835 747 aa18.49■□□□□ 0.55
TMCO3-202ENST00000434316 KLHL40Q2TBA0 621 aa18.49■□□□□ 0.55
TMCO3-202ENST00000434316 DIP2CQ9Y2E4 1556 aa18.48■□□□□ 0.55
TMCO3-202ENST00000434316 FBXO31Q5XUX0 539 aaPredicted RBP18.48■□□□□ 0.55
TMCO3-202ENST00000434316 MCTP1Q6DN14 999 aa18.48■□□□□ 0.55
TMCO3-202ENST00000434316 CLEC17AQ6ZS10 378 aa18.48■□□□□ 0.55
TMCO3-202ENST00000434316 API5Q9BZZ5 524 aaKnown RBP18.48■□□□□ 0.55
TMCO3-202ENST00000434316 TTC22Q5TAA0 569 aa18.48■□□□□ 0.55
TMCO3-202ENST00000434316 HSP90AA2PQ14568 343 aaPredicted RBP18.48■□□□□ 0.55
TMCO3-202ENST00000434316 NME9Q86XW9 330 aa18.48■□□□□ 0.55
TMCO3-202ENST00000434316 DCTPP1Q9H773 170 aa18.48■□□□□ 0.55
TMCO3-202ENST00000434316 RABEP1Q15276 862 aa18.47■□□□□ 0.55
TMCO3-202ENST00000434316 CFAP44Q96MT7 982 aa18.47■□□□□ 0.55
TMCO3-202ENST00000434316 ALKQ9UM73 1620 aa18.47■□□□□ 0.55
TMCO3-202ENST00000434316 APBB1O00213 710 aa18.46■□□□□ 0.55
TMCO3-202ENST00000434316 CCDC173Q0VFZ6 552 aa18.46■□□□□ 0.55
TMCO3-202ENST00000434316 USP26Q9BXU7 913 aa18.46■□□□□ 0.55
TMCO3-202ENST00000434316 NCLP19338 710 aaKnown RBP18.46■□□□□ 0.55
TMCO3-202ENST00000434316 PPP1R9BQ96SB3 815 aa18.46■□□□□ 0.55
TMCO3-202ENST00000434316 KRT24Q2M2I5 525 aa18.46■□□□□ 0.54
TMCO3-202ENST00000434316 SMARCA5O60264 1052 aaPredicted RBP18.45■□□□□ 0.54
TMCO3-202ENST00000434316 DLG5Q8TDM6 1919 aa18.45■□□□□ 0.54
TMCO3-202ENST00000434316 RRS1Q15050 365 aaKnown RBP18.45■□□□□ 0.54
TMCO3-202ENST00000434316 CAVIN1Q6NZI2 390 aaKnown RBP18.45■□□□□ 0.54
TMCO3-202ENST00000434316 RIMS2Q9UQ26 1411 aa18.44■□□□□ 0.54
TMCO3-202ENST00000434316 REREQ9P2R6 1566 aa18.44■□□□□ 0.54
TMCO3-202ENST00000434316 PREX1Q8TCU6 1659 aa18.44■□□□□ 0.54
TMCO3-202ENST00000434316 ZGPATQ8N5A5 531 aaKnown RBP18.43■□□□□ 0.54
TMCO3-202ENST00000434316 YEATS2Q9ULM3 1422 aa18.43■□□□□ 0.54
TMCO3-202ENST00000434316 CYP2E1P05181 493 aaPredicted RBP18.43■□□□□ 0.54
TMCO3-202ENST00000434316 LMBRD1Q9NUN5 540 aa18.43■□□□□ 0.54
TMCO3-202ENST00000434316 RRP9O43818 475 aaKnown RBP18.43■□□□□ 0.54
TMCO3-202ENST00000434316 SDSP20132 328 aa18.43■□□□□ 0.54
TMCO3-202ENST00000434316 CHAMP1Q96JM3 812 aa18.42■□□□□ 0.54
TMCO3-202ENST00000434316 ATP10DQ9P241 1426 aa18.42■□□□□ 0.54
TMCO3-202ENST00000434316 ANKRD44Q8N8A2 993 aa18.42■□□□□ 0.54
TMCO3-202ENST00000434316 IBTKQ9P2D0 1353 aaPredicted RBP18.42■□□□□ 0.54
TMCO3-202ENST00000434316 NUCB2P80303 420 aa18.41■□□□□ 0.54
TMCO3-202ENST00000434316 ZSCAN23Q3MJ62 389 aa18.41■□□□□ 0.54
TMCO3-202ENST00000434316 INTS3Q68E01 1043 aaKnown RBP18.41■□□□□ 0.54
TMCO3-202ENST00000434316 STAG3Q9UJ98 1225 aa18.41■□□□□ 0.54
TMCO3-202ENST00000434316 ATP7BP35670 1465 aa18.41■□□□□ 0.54
TMCO3-202ENST00000434316 LMOD3Q0VAK6 560 aa18.41■□□□□ 0.54
TMCO3-202ENST00000434316 ZSCAN30Q86W11 494 aa18.41■□□□□ 0.54
TMCO3-202ENST00000434316 NCKAP5LQ9HCH0 1330 aa18.41■□□□□ 0.54
TMCO3-202ENST00000434316 ZNF445P59923 1031 aa18.4■□□□□ 0.54
TMCO3-202ENST00000434316 CEP85Q6P2H3 762 aa18.4■□□□□ 0.54
TMCO3-202ENST00000434316 ANP32BQ92688 251 aaKnown RBP18.4■□□□□ 0.54
TMCO3-202ENST00000434316 RBM27Q9P2N5 1060 aaKnown RBP18.4■□□□□ 0.54
TMCO3-202ENST00000434316 CDK12Q9NYV4 1490 aaPredicted RBP18.39■□□□□ 0.54
TMCO3-202ENST00000434316 RBSNQ9H1K0 784 aa18.39■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms