RNA–Protein interactions for RNA: ENST00000433332.7

SRGAP3-203, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 5

Gene SRGAP3, Length 2,222 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-203ENST00000433332 CABP1Q9NZU7 370 aa11.08□□□□□ -0.64
SRGAP3-203ENST00000433332 AKAP12Q02952 1782 aa11.07□□□□□ -0.64
SRGAP3-203ENST00000433332 SHPRHQ149N8 1683 aa11.07□□□□□ -0.64
SRGAP3-203ENST00000433332 CPSF1Q10570 1443 aaKnown RBP11.07□□□□□ -0.64
SRGAP3-203ENST00000433332 RRP9O43818 475 aaKnown RBP11.07□□□□□ -0.64
SRGAP3-203ENST00000433332 ANKLE2Q86XL3 938 aa11.07□□□□□ -0.64
SRGAP3-203ENST00000433332 AMOTL2Q9Y2J4 779 aa11.07□□□□□ -0.64
SRGAP3-203ENST00000433332 EDC4Q6P2E9 1401 aaKnown RBP11.06□□□□□ -0.64
SRGAP3-203ENST00000433332 NUDT16Q96DE0 195 aaKnown RBP11.05□□□□□ -0.64
SRGAP3-203ENST00000433332 PRDM10Q9NQV6 1147 aa11.05□□□□□ -0.64
SRGAP3-203ENST00000433332 ADAMTS8Q9UP79 889 aa11.05□□□□□ -0.64
SRGAP3-203ENST00000433332 SETQ01105 290 aaPredicted RBP11.05□□□□□ -0.64
SRGAP3-203ENST00000433332 CHD2O14647 1828 aaKnown RBP11.05□□□□□ -0.64
SRGAP3-203ENST00000433332 PLCD4Q9BRC7 762 aa11.04□□□□□ -0.64
SRGAP3-203ENST00000433332 NUDCQ9Y266 331 aa11.04□□□□□ -0.64
SRGAP3-203ENST00000433332 CCDC61Q9Y6R9 512 aa11.04□□□□□ -0.64
SRGAP3-203ENST00000433332 PDE3BQ13370 1112 aa11.04□□□□□ -0.64
SRGAP3-203ENST00000433332 CFAP53Q96M91 514 aa11.04□□□□□ -0.64
SRGAP3-203ENST00000433332 NRKQ7Z2Y5 1582 aa11.04□□□□□ -0.64
SRGAP3-203ENST00000433332 NPHP4O75161 1426 aaPredicted RBP11.03□□□□□ -0.64
SRGAP3-203ENST00000433332 FYB1O15117 783 aa11.03□□□□□ -0.64
SRGAP3-203ENST00000433332 PRR36Q9H6K5 1346 aa11.03□□□□□ -0.64
SRGAP3-203ENST00000433332 TNNT2P45379 298 aaPredicted RBP11.03□□□□□ -0.64
SRGAP3-203ENST00000433332 KDM4AO75164 1064 aa11.02□□□□□ -0.65
SRGAP3-203ENST00000433332 GGNBP2Q9H3C7 697 aa11.02□□□□□ -0.65
SRGAP3-203ENST00000433332 GRIPAP1Q4V328 841 aa11.01□□□□□ -0.65
SRGAP3-203ENST00000433332 ZC3H15Q8WU90 426 aaKnown RBP11.01□□□□□ -0.65
SRGAP3-203ENST00000433332 ANKARQ7Z5J8 1434 aa11.01□□□□□ -0.65
SRGAP3-203ENST00000433332 FMN2Q9NZ56 1722 aa11.01□□□□□ -0.65
SRGAP3-203ENST00000433332 NKTRP30414 1462 aaKnown RBP11.01□□□□□ -0.65
SRGAP3-203ENST00000433332 MTHFSP49914 203 aa11.01□□□□□ -0.65
SRGAP3-203ENST00000433332 WWC1Q8IX03 1113 aa11.01□□□□□ -0.65
SRGAP3-203ENST00000433332 COL3A1P02461 1466 aaPredicted RBP11.01□□□□□ -0.65
SRGAP3-203ENST00000433332 NWD1Q149M9 1564 aa11□□□□□ -0.65
SRGAP3-203ENST00000433332 KCNA6P17658 529 aa11□□□□□ -0.65
SRGAP3-203ENST00000433332 NALCNQ8IZF0 1738 aa11□□□□□ -0.65
SRGAP3-203ENST00000433332 PLEKHG3A1L390 1219 aa11□□□□□ -0.65
SRGAP3-203ENST00000433332 RTL5Q5HYW3 569 aaPredicted RBP11□□□□□ -0.65
SRGAP3-203ENST00000433332 SENP3-EIF4A1A0A087X0R7 540 aa10.99□□□□□ -0.65
SRGAP3-203ENST00000433332 MKRN3Q13064 507 aaKnown RBP10.99□□□□□ -0.65
SRGAP3-203ENST00000433332 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.99□□□□□ -0.65
SRGAP3-203ENST00000433332 NGEFQ8N5V2 710 aa10.99□□□□□ -0.65
SRGAP3-203ENST00000433332 KCNG1Q9UIX4 513 aa10.99□□□□□ -0.65
SRGAP3-203ENST00000433332 HSP90AA2PQ14568 343 aaPredicted RBP10.99□□□□□ -0.65
SRGAP3-203ENST00000433332 PRDM4Q9UKN5 801 aa10.99□□□□□ -0.65
SRGAP3-203ENST00000433332 NCKAP5LQ9HCH0 1330 aa10.98□□□□□ -0.65
SRGAP3-203ENST00000433332 PTMSP20962 102 aa10.98□□□□□ -0.65
SRGAP3-203ENST00000433332 CALD1Q05682 793 aaKnown RBP10.98□□□□□ -0.65
SRGAP3-203ENST00000433332 USP6P35125 1406 aa10.98□□□□□ -0.65
SRGAP3-203ENST00000433332 IQSEC2Q5JU85 1478 aa10.98□□□□□ -0.65
SRGAP3-203ENST00000433332 ACEP12821 1306 aa10.97□□□□□ -0.65
SRGAP3-203ENST00000433332 PNPLA6Q8IY17 1366 aa10.97□□□□□ -0.65
SRGAP3-203ENST00000433332 PTMAP06454 111 aaKnown RBP10.96□□□□□ -0.65
SRGAP3-203ENST00000433332 CCDC146Q8IYE0 955 aa10.96□□□□□ -0.65
SRGAP3-203ENST00000433332 ZNF521Q96K83 1311 aa10.96□□□□□ -0.65
SRGAP3-203ENST00000433332 AATKQ6ZMQ8 1374 aa10.96□□□□□ -0.65
SRGAP3-203ENST00000433332 ADGRL3Q9HAR2 1447 aa10.96□□□□□ -0.65
SRGAP3-203ENST00000433332 CDK12Q9NYV4 1490 aaPredicted RBP10.96□□□□□ -0.65
SRGAP3-203ENST00000433332 RGPD8O14715 1765 aaPredicted RBP10.96□□□□□ -0.66
SRGAP3-203ENST00000433332 NME9Q86XW9 330 aa10.96□□□□□ -0.66
SRGAP3-203ENST00000433332 SSH2Q76I76 1423 aa10.95□□□□□ -0.66
SRGAP3-203ENST00000433332 RNF123Q5XPI4 1314 aa10.95□□□□□ -0.66
SRGAP3-203ENST00000433332 RUNDC1Q96C34 613 aa10.95□□□□□ -0.66
SRGAP3-203ENST00000433332 COG3Q96JB2 828 aa10.95□□□□□ -0.66
SRGAP3-203ENST00000433332 OVOS2A0A0J9YW53 1432 aa10.95□□□□□ -0.66
SRGAP3-203ENST00000433332 OVOS2Q6IE36 1432 aa10.95□□□□□ -0.66
SRGAP3-203ENST00000433332 TTC21BQ7Z4L5 1316 aa10.95□□□□□ -0.66
SRGAP3-203ENST00000433332 MCCP23508 829 aa10.94□□□□□ -0.66
SRGAP3-203ENST00000433332 APAF1O14727 1248 aa10.94□□□□□ -0.66
SRGAP3-203ENST00000433332 MAFGO15525 162 aa10.94□□□□□ -0.66
SRGAP3-203ENST00000433332 MAPK8IP2Q13387 824 aaPredicted RBP10.94□□□□□ -0.66
SRGAP3-203ENST00000433332 TTC21AQ8NDW8 1320 aa10.93□□□□□ -0.66
SRGAP3-203ENST00000433332 NUTM2FA1L443 756 aa10.93□□□□□ -0.66
SRGAP3-203ENST00000433332 NEFMP07197 916 aa10.93□□□□□ -0.66
SRGAP3-203ENST00000433332 MAP2P11137 1827 aaKnown RBP10.93□□□□□ -0.66
SRGAP3-203ENST00000433332 FBXW7Q969H0 707 aa10.93□□□□□ -0.66
SRGAP3-203ENST00000433332 USP54Q70EL1 1684 aa10.93□□□□□ -0.66
SRGAP3-203ENST00000433332 LRRC7Q96NW7 1537 aa10.92□□□□□ -0.66
SRGAP3-203ENST00000433332 U2AF1L5P0DN76 240 aaPredicted RBP10.92□□□□□ -0.66
SRGAP3-203ENST00000433332 ANAPC15P60006 121 aa10.92□□□□□ -0.66
SRGAP3-203ENST00000433332 U2AF1Q01081 240 aaKnown RBP eCLIP10.92□□□□□ -0.66
SRGAP3-203ENST00000433332 GOLGA2Q08379 1002 aa10.92□□□□□ -0.66
SRGAP3-203ENST00000433332 CDCA7LQ96GN5 454 aa10.92□□□□□ -0.66
SRGAP3-203ENST00000433332 POLKQ9UBT6 870 aa10.92□□□□□ -0.66
SRGAP3-203ENST00000433332 DIAPH1O60610 1272 aaKnown RBP10.92□□□□□ -0.66
SRGAP3-203ENST00000433332 MYCNP04198 464 aaPredicted RBP10.92□□□□□ -0.66
SRGAP3-203ENST00000433332 WDR70Q9NW82 654 aa10.92□□□□□ -0.66
SRGAP3-203ENST00000433332 PIK3C2AO00443 1686 aa10.91□□□□□ -0.66
SRGAP3-203ENST00000433332 NGDNQ8NEJ9 315 aaKnown RBP10.91□□□□□ -0.66
SRGAP3-203ENST00000433332 RCAN3Q9UKA8 241 aa10.91□□□□□ -0.66
SRGAP3-203ENST00000433332 ZRANB1Q9UGI0 708 aa10.9□□□□□ -0.66
SRGAP3-203ENST00000433332 USP31Q70CQ4 1352 aa10.9□□□□□ -0.66
SRGAP3-203ENST00000433332 U2SURPO15042 1029 aaKnown RBP10.9□□□□□ -0.66
SRGAP3-203ENST00000433332 PMFBP1Q8TBY8 1022 aa10.9□□□□□ -0.66
SRGAP3-203ENST00000433332 SLC4A2P04920 1241 aa10.89□□□□□ -0.67
SRGAP3-203ENST00000433332 TCP11L2Q8N4U5 519 aa10.89□□□□□ -0.67
SRGAP3-203ENST00000433332 PNNQ9H307 717 aaKnown RBP10.89□□□□□ -0.67
SRGAP3-203ENST00000433332 FAM193AP78312 1265 aa10.89□□□□□ -0.67
SRGAP3-203ENST00000433332 SLFN5Q08AF3 891 aa10.89□□□□□ -0.67
SRGAP3-203ENST00000433332 DUSP27Q5VZP5 1158 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms