RNA–Protein interactions for RNA: ENST00000432306.5

VTI1A-202, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best) BASIC

Gene VTI1A, Length 1,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-202ENST00000432306 MS4A3Q96HJ5 214 aa10.4□□□□□ -0.74
VTI1A-202ENST00000432306 PRAG1Q86YV5 1406 aa10.4□□□□□ -0.75
VTI1A-202ENST00000432306 PRDM15P57071 1507 aaPredicted RBP10.39□□□□□ -0.75
VTI1A-202ENST00000432306 FAM161AQ3B820 660 aa10.39□□□□□ -0.75
VTI1A-202ENST00000432306 PHLPP1O60346 1717 aa10.39□□□□□ -0.75
VTI1A-202ENST00000432306 MAST1Q9Y2H9 1570 aa10.39□□□□□ -0.75
VTI1A-202ENST00000432306 LTKP29376 864 aa10.38□□□□□ -0.75
VTI1A-202ENST00000432306 C8orf34Q49A92 452 aa10.38□□□□□ -0.75
VTI1A-202ENST00000432306 ZNF521Q96K83 1311 aa10.38□□□□□ -0.75
VTI1A-202ENST00000432306 EIF3AQ14152 1382 aaKnown RBP10.38□□□□□ -0.75
VTI1A-202ENST00000432306 TMEM94Q12767 1356 aa10.38□□□□□ -0.75
VTI1A-202ENST00000432306 KDM5AP29375 1690 aaKnown RBP10.37□□□□□ -0.75
VTI1A-202ENST00000432306 SOX12O15370 315 aa10.37□□□□□ -0.75
VTI1A-202ENST00000432306 RETREG2Q8NC44 543 aa10.37□□□□□ -0.75
VTI1A-202ENST00000432306 FRAT1Q92837 279 aaPredicted RBP10.37□□□□□ -0.75
VTI1A-202ENST00000432306 AK7Q96M32 723 aa10.37□□□□□ -0.75
VTI1A-202ENST00000432306 CRBNQ96SW2 442 aa10.37□□□□□ -0.75
VTI1A-202ENST00000432306 MROH1Q8NDA8 1641 aa10.37□□□□□ -0.75
VTI1A-202ENST00000432306 JCADQ9P266 1359 aa10.36□□□□□ -0.75
VTI1A-202ENST00000432306 KCNA6P17658 529 aa10.36□□□□□ -0.75
VTI1A-202ENST00000432306 NLRP6P59044 892 aa10.36□□□□□ -0.75
VTI1A-202ENST00000432306 SERPINA10Q9UK55 444 aa10.36□□□□□ -0.75
VTI1A-202ENST00000432306 BRPF3Q9ULD4 1205 aa10.36□□□□□ -0.75
VTI1A-202ENST00000432306 PIK3C2BO00750 1634 aa10.36□□□□□ -0.75
VTI1A-202ENST00000432306 CCDC144AA2RUR9 1427 aa10.36□□□□□ -0.75
VTI1A-202ENST00000432306 IRF5Q13568 498 aa10.36□□□□□ -0.75
VTI1A-202ENST00000432306 PROSER2Q86WR7 435 aaPredicted RBP10.36□□□□□ -0.75
VTI1A-202ENST00000432306 NKTRP30414 1462 aaKnown RBP10.35□□□□□ -0.75
VTI1A-202ENST00000432306 ARHGAP31Q2M1Z3 1444 aa10.35□□□□□ -0.75
VTI1A-202ENST00000432306 NUP155O75694 1391 aa10.35□□□□□ -0.75
VTI1A-202ENST00000432306 CDCA7LQ96GN5 454 aa10.35□□□□□ -0.75
VTI1A-202ENST00000432306 TMEM106CQ9BVX2 250 aa10.35□□□□□ -0.75
VTI1A-202ENST00000432306 MSH6P52701 1360 aa10.34□□□□□ -0.75
VTI1A-202ENST00000432306 TMEM2Q9UHN6 1383 aa10.34□□□□□ -0.75
VTI1A-202ENST00000432306 PATL2C9JE40 543 aaKnown RBP10.34□□□□□ -0.75
VTI1A-202ENST00000432306 UPF1Q92900 1129 aaKnown RBP eCLIP10.34□□□□□ -0.758e-7■■■■■ 27.8
VTI1A-202ENST00000432306 TESK2Q96S53 571 aa10.34□□□□□ -0.75
VTI1A-202ENST00000432306 NPC1L1Q9UHC9 1359 aa10.34□□□□□ -0.75
VTI1A-202ENST00000432306 NWD1Q149M9 1564 aa10.33□□□□□ -0.76
VTI1A-202ENST00000432306 DUSP27Q5VZP5 1158 aa10.33□□□□□ -0.76
VTI1A-202ENST00000432306 ZNF772Q68DY9 489 aaPredicted RBP10.33□□□□□ -0.76
VTI1A-202ENST00000432306 TRMT2AQ8IZ69 625 aaKnown RBP10.33□□□□□ -0.76
VTI1A-202ENST00000432306 CCDC97Q96F63 343 aaPredicted RBP10.33□□□□□ -0.76
VTI1A-202ENST00000432306 MS4A4AQ96JQ5 239 aa10.33□□□□□ -0.76
VTI1A-202ENST00000432306 DUOX2Q9NRD8 1548 aa10.33□□□□□ -0.76
VTI1A-202ENST00000432306 EFCAB6Q5THR3 1501 aa10.33□□□□□ -0.76
VTI1A-202ENST00000432306 NGEFQ8N5V2 710 aa10.33□□□□□ -0.76
VTI1A-202ENST00000432306 CLUAP1Q96AJ1 413 aa10.33□□□□□ -0.76
VTI1A-202ENST00000432306 TET3O43151 1660 aa10.32□□□□□ -0.76
VTI1A-202ENST00000432306 ONECUT3O60422 494 aaPredicted RBP10.32□□□□□ -0.76
VTI1A-202ENST00000432306 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.32□□□□□ -0.76
VTI1A-202ENST00000432306 COL16A1Q07092 1604 aaPredicted RBP10.32□□□□□ -0.76
VTI1A-202ENST00000432306 PIK3C2GO75747 1445 aa10.32□□□□□ -0.76
VTI1A-202ENST00000432306 NINLQ9Y2I6 1382 aa10.31□□□□□ -0.76
VTI1A-202ENST00000432306 SPATA31A6Q5VVP1 1343 aa10.31□□□□□ -0.76
VTI1A-202ENST00000432306 TESPA1A2RU30 521 aaPredicted RBP10.31□□□□□ -0.76
VTI1A-202ENST00000432306 MEX3CQ5U5Q3 659 aaKnown RBP10.31□□□□□ -0.76
VTI1A-202ENST00000432306 SLAIN2Q9P270 581 aa10.31□□□□□ -0.76
VTI1A-202ENST00000432306 CHD2O14647 1828 aaKnown RBP10.31□□□□□ -0.76
VTI1A-202ENST00000432306 UNC13BO14795 1591 aa10.3□□□□□ -0.76
VTI1A-202ENST00000432306 FGD1P98174 961 aa10.3□□□□□ -0.76
VTI1A-202ENST00000432306 ERBINQ96RT1 1412 aa10.3□□□□□ -0.76
VTI1A-202ENST00000432306 SHPRHQ149N8 1683 aa10.3□□□□□ -0.76
VTI1A-202ENST00000432306 USP19O94966 1318 aa10.29□□□□□ -0.76
VTI1A-202ENST00000432306 PLIN1O60240 522 aa10.29□□□□□ -0.76
VTI1A-202ENST00000432306 AAMPQ13685 434 aa10.29□□□□□ -0.76
VTI1A-202ENST00000432306 DCAF11Q8TEB1 546 aa10.29□□□□□ -0.76
VTI1A-202ENST00000432306 ARHGEF1Q92888 912 aaKnown RBP10.29□□□□□ -0.76
VTI1A-202ENST00000432306 PKNOX2Q96KN3 472 aa10.29□□□□□ -0.76
VTI1A-202ENST00000432306 SLC26A8Q96RN1 970 aa10.29□□□□□ -0.76
VTI1A-202ENST00000432306 KANK1Q14678 1352 aa10.29□□□□□ -0.76
VTI1A-202ENST00000432306 PLEKHH1Q9ULM0 1364 aa10.29□□□□□ -0.76
VTI1A-202ENST00000432306 CDK12Q9NYV4 1490 aaPredicted RBP10.29□□□□□ -0.76
VTI1A-202ENST00000432306 VIRMAQ69YN4 1812 aaKnown RBP10.29□□□□□ -0.76
VTI1A-202ENST00000432306 LRP6O75581 1613 aa10.28□□□□□ -0.76
VTI1A-202ENST00000432306 EVX2Q03828 476 aa10.28□□□□□ -0.76
VTI1A-202ENST00000432306 CCDC27Q2M243 656 aa10.28□□□□□ -0.76
VTI1A-202ENST00000432306 C20orf194Q5TEA3 1177 aa10.28□□□□□ -0.76
VTI1A-202ENST00000432306 FRAT2O75474 233 aaPredicted RBP10.27□□□□□ -0.76
VTI1A-202ENST00000432306 RXRBP28702 533 aa10.27□□□□□ -0.76
VTI1A-202ENST00000432306 RBM33Q96EV2 1170 aaKnown RBP10.27□□□□□ -0.76
VTI1A-202ENST00000432306 ADGRB3O60242 1522 aa10.27□□□□□ -0.77
VTI1A-202ENST00000432306 TTLL13PA6NNM8 815 aa10.27□□□□□ -0.77
VTI1A-202ENST00000432306 GALR2O43603 387 aaPredicted RBP10.27□□□□□ -0.77
VTI1A-202ENST00000432306 TIE1P35590 1138 aa10.27□□□□□ -0.77
VTI1A-202ENST00000432306 GOLGA2Q08379 1002 aa10.27□□□□□ -0.77
VTI1A-202ENST00000432306 SLFN5Q08AF3 891 aa10.27□□□□□ -0.77
VTI1A-202ENST00000432306 L1TD1Q5T7N2 865 aaKnown RBP10.27□□□□□ -0.77
VTI1A-202ENST00000432306 AHDC1Q5TGY3 1603 aaPredicted RBP10.26□□□□□ -0.77
VTI1A-202ENST00000432306 NCOA3Q9Y6Q9 1424 aa10.26□□□□□ -0.77
VTI1A-202ENST00000432306 MAPK8IP3Q9UPT6 1336 aa10.26□□□□□ -0.77
VTI1A-202ENST00000432306 TMF1P82094 1093 aa10.26□□□□□ -0.77
VTI1A-202ENST00000432306 IDI1Q13907 227 aa10.26□□□□□ -0.77
VTI1A-202ENST00000432306 STAC3Q96MF2 364 aa10.26□□□□□ -0.77
VTI1A-202ENST00000432306 BMP2KQ9NSY1 1161 aaPredicted RBP10.26□□□□□ -0.77
VTI1A-202ENST00000432306 IQGAP3Q86VI3 1631 aa10.25□□□□□ -0.77
VTI1A-202ENST00000432306 LMTK2Q8IWU2 1503 aa10.25□□□□□ -0.77
VTI1A-202ENST00000432306 MYO5BQ9ULV0 1848 aa10.25□□□□□ -0.77
VTI1A-202ENST00000432306 PDE3AQ14432 1141 aa10.24□□□□□ -0.77
VTI1A-202ENST00000432306 ANTXR1Q9H6X2 564 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms