RNA–Protein interactions for RNA: ENST00000432072.6

FN1-209, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 7,759 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-209ENST00000432072 CAVIN4Q5BKX8 364 aa11.95□□□□□ -0.5
FN1-209ENST00000432072 CRACR2BQ8N4Y2 399 aaPredicted RBP11.95□□□□□ -0.5
FN1-209ENST00000432072 ST5P78524 1137 aa11.95□□□□□ -0.5
FN1-209ENST00000432072 CTTNBP2Q8WZ74 1663 aa11.95□□□□□ -0.5
FN1-209ENST00000432072 KIAA0586Q9BVV6 1533 aa11.95□□□□□ -0.5
FN1-209ENST00000432072 GNAI2P04899 355 aa11.94□□□□□ -0.5
FN1-209ENST00000432072 TXLNAP40222 546 aa11.94□□□□□ -0.5
FN1-209ENST00000432072 GNAT3A8MTJ3 354 aa11.94□□□□□ -0.5
FN1-209ENST00000432072 ITSN2Q9NZM3 1697 aa11.94□□□□□ -0.5
FN1-209ENST00000432072 SLC12A5Q9H2X9 1139 aa11.94□□□□□ -0.5
FN1-209ENST00000432072 CDK13Q14004 1512 aaKnown RBP11.94□□□□□ -0.5
FN1-209ENST00000432072 WAPLQ7Z5K2 1190 aa11.94□□□□□ -0.5
FN1-209ENST00000432072 BICD2Q8TD16 824 aa11.94□□□□□ -0.5
FN1-209ENST00000432072 RAI14Q9P0K7 980 aa11.94□□□□□ -0.5
FN1-209ENST00000432072 TRIM21P19474 475 aaKnown RBP11.94□□□□□ -0.5
FN1-209ENST00000432072 NAP1L1P55209 391 aaKnown RBP11.94□□□□□ -0.5
FN1-209ENST00000432072 ZNF76P36508 570 aa11.93□□□□□ -0.5
FN1-209ENST00000432072 SMC3Q9UQE7 1217 aa11.93□□□□□ -0.5
FN1-209ENST00000432072 ZNF287Q9HBT7 754 aa11.93□□□□□ -0.5
FN1-209ENST00000432072 SPINK5Q9NQ38 1064 aaPredicted RBP11.93□□□□□ -0.5
FN1-209ENST00000432072 ATAD2Q6PL18 1390 aa11.93□□□□□ -0.5
FN1-209ENST00000432072 ANKRD30BQ9BXX2 1392 aa11.93□□□□□ -0.5
FN1-209ENST00000432072 FANCAO15360 1455 aa11.93□□□□□ -0.5
FN1-209ENST00000432072 OFD1O75665 1012 aa11.93□□□□□ -0.5
FN1-209ENST00000432072 TDO2P48775 406 aa11.92□□□□□ -0.5
FN1-209ENST00000432072 SOGA3Q5TF21 947 aa11.92□□□□□ -0.5
FN1-209ENST00000432072 ABCF2Q9UG63 623 aa11.92□□□□□ -0.5
FN1-209ENST00000432072 SLC4A2P04920 1241 aa11.92□□□□□ -0.5
FN1-209ENST00000432072 CCDC85AQ96PX6 553 aaPredicted RBP11.92□□□□□ -0.5
FN1-209ENST00000432072 PHF8Q9UPP1 1060 aa11.92□□□□□ -0.5
FN1-209ENST00000432072 GRIN2AQ12879 1464 aa11.92□□□□□ -0.5
FN1-209ENST00000432072 CCDC141Q6ZP82 1450 aa11.92□□□□□ -0.5
FN1-209ENST00000432072 MYO1BO43795 1136 aa11.92□□□□□ -0.5
FN1-209ENST00000432072 USP5P45974 858 aa11.92□□□□□ -0.5
FN1-209ENST00000432072 PLB1Q6P1J6 1458 aa11.92□□□□□ -0.5
FN1-209ENST00000432072 VPS37CA5D8V6 355 aaPredicted RBP11.92□□□□□ -0.5
FN1-209ENST00000432072 C6orf229H3BNL8 230 aa11.92□□□□□ -0.5
FN1-209ENST00000432072 SYCP1Q15431 976 aa11.92□□□□□ -0.5
FN1-209ENST00000432072 CCDC69A6NI79 296 aa11.91□□□□□ -0.5
FN1-209ENST00000432072 CRBNQ96SW2 442 aa11.91□□□□□ -0.5
FN1-209ENST00000432072 TWISTNBQ3B726 338 aaPredicted RBP11.91□□□□□ -0.5
FN1-209ENST00000432072 CCAR2Q8N163 923 aaKnown RBP11.91□□□□□ -0.5
FN1-209ENST00000432072 CEP126Q9P2H0 1117 aa11.91□□□□□ -0.5
FN1-209ENST00000432072 AMOTQ4VCS5 1084 aa11.91□□□□□ -0.5
FN1-209ENST00000432072 DZIP1Q86YF9 867 aaKnown RBP11.91□□□□□ -0.5
FN1-209ENST00000432072 SLF2Q8IX21 1173 aa11.91□□□□□ -0.5
FN1-209ENST00000432072 PPM1FP49593 454 aaPredicted RBP11.91□□□□□ -0.5
FN1-209ENST00000432072 METTL24Q5JXM2 366 aa11.9□□□□□ -0.5
FN1-209ENST00000432072 HSP90AB3PQ58FF7 597 aa11.9□□□□□ -0.5
FN1-209ENST00000432072 POLR3DP05423 398 aaPredicted RBP11.9□□□□□ -0.5
FN1-209ENST00000432072 RDXP35241 583 aaKnown RBP11.9□□□□□ -0.5
FN1-209ENST00000432072 HSP90AB2PQ58FF8 381 aa11.9□□□□□ -0.5
FN1-209ENST00000432072 CCT4P50991 539 aaKnown RBP11.9□□□□□ -0.51
FN1-209ENST00000432072 LNPKQ9C0E8 428 aa11.9□□□□□ -0.51
FN1-209ENST00000432072 ZHX3Q9H4I2 956 aa11.89□□□□□ -0.51
FN1-209ENST00000432072 SCLT1Q96NL6 688 aa11.89□□□□□ -0.51
FN1-209ENST00000432072 PTPN23Q9H3S7 1636 aa11.89□□□□□ -0.51
FN1-209ENST00000432072 TNIP1Q15025 636 aa11.89□□□□□ -0.51
FN1-209ENST00000432072 ATP2B1P20020 1258 aa11.88□□□□□ -0.51
FN1-209ENST00000432072 DNAI2Q9GZS0 605 aa11.88□□□□□ -0.51
FN1-209ENST00000432072 OLFM4Q6UX06 510 aa11.88□□□□□ -0.51
FN1-209ENST00000432072 DDX46Q7L014 1031 aaKnown RBP11.88□□□□□ -0.51
FN1-209ENST00000432072 KIAA1107Q9UPP5 1409 aa11.88□□□□□ -0.51
FN1-209ENST00000432072 FBXO31Q5XUX0 539 aaPredicted RBP11.87□□□□□ -0.51
FN1-209ENST00000432072 NUP133Q8WUM0 1156 aa11.87□□□□□ -0.51
FN1-209ENST00000432072 PRKRIP1Q9H875 184 aaPredicted RBP11.87□□□□□ -0.51
FN1-209ENST00000432072 DAPK1P53355 1430 aa11.87□□□□□ -0.51
FN1-209ENST00000432072 TNRQ92752 1358 aa11.87□□□□□ -0.51
FN1-209ENST00000432072 TRIM22Q8IYM9 498 aa11.87□□□□□ -0.51
FN1-209ENST00000432072 MKNK2Q9HBH9 465 aa11.87□□□□□ -0.51
FN1-209ENST00000432072 IFIT1P09914 478 aaKnown RBP11.86□□□□□ -0.51
FN1-209ENST00000432072 FEZ1Q99689 392 aa11.86□□□□□ -0.51
FN1-209ENST00000432072 SASS6Q6UVJ0 657 aa11.86□□□□□ -0.51
FN1-209ENST00000432072 ACSBG1Q96GR2 724 aa11.86□□□□□ -0.51
FN1-209ENST00000432072 RRP1P56182 461 aaKnown RBP11.86□□□□□ -0.51
FN1-209ENST00000432072 CCDC73Q6ZRK6 1079 aa11.86□□□□□ -0.51
FN1-209ENST00000432072 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.86□□□□□ -0.51
FN1-209ENST00000432072 A0A087WZG4 1122 aa11.86□□□□□ -0.51
FN1-209ENST00000432072 USHBP1Q8N6Y0 703 aa11.86□□□□□ -0.51
FN1-209ENST00000432072 UBAC1Q9BSL1 405 aa11.86□□□□□ -0.51
FN1-209ENST00000432072 EIF4G3O43432 1585 aaKnown RBP11.86□□□□□ -0.51
FN1-209ENST00000432072 TCP11L2Q8N4U5 519 aa11.86□□□□□ -0.51
FN1-209ENST00000432072 AKAP2Q9Y2D5 859 aa11.86□□□□□ -0.51
FN1-209ENST00000432072 BEGAINQ9BUH8 593 aa11.85□□□□□ -0.51
FN1-209ENST00000432072 SRCIN1Q9C0H9 1055 aa11.85□□□□□ -0.51
FN1-209ENST00000432072 TRMT112Q9UI30 125 aaKnown RBP11.85□□□□□ -0.51
FN1-209ENST00000432072 NPHP3Q7Z494 1330 aa11.85□□□□□ -0.51
FN1-209ENST00000432072 IDH1O75874 414 aaKnown RBP11.85□□□□□ -0.51
FN1-209ENST00000432072 PPP4R3AQ6IN85 833 aa11.85□□□□□ -0.51
FN1-209ENST00000432072 DDX11L8A8MPP1 907 aa11.85□□□□□ -0.51
FN1-209ENST00000432072 MAGEC2Q9UBF1 373 aaPredicted RBP11.85□□□□□ -0.51
FN1-209ENST00000432072 VTI1AQ96AJ9 217 aa11.85□□□□□ -0.51
FN1-209ENST00000432072 DRC1Q96MC2 740 aa11.85□□□□□ -0.51
FN1-209ENST00000432072 SEC63Q9UGP8 760 aaKnown RBP11.85□□□□□ -0.51
FN1-209ENST00000432072 NF2P35240 595 aa11.84□□□□□ -0.51
FN1-209ENST00000432072 PDCL3Q9H2J4 239 aa11.84□□□□□ -0.51
FN1-209ENST00000432072 TFCP2L1Q9NZI6 479 aa11.84□□□□□ -0.51
FN1-209ENST00000432072 LMOD1P29536 600 aaPredicted RBP11.84□□□□□ -0.51
FN1-209ENST00000432072 IFIT5Q13325 482 aaKnown RBP11.84□□□□□ -0.51
FN1-209ENST00000432072 TEX13AQ9BXU3 409 aaPredicted RBP11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms