RNA–Protein interactions for RNA: ENST00000431742.2

CSTF3-202, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 2 BASIC

Gene CSTF3, Length 715 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-202ENST00000431742 RTL1A6NKG5 1358 aa19.68■□□□□ 0.74
CSTF3-202ENST00000431742 WNK3Q9BYP7 1800 aa19.67■□□□□ 0.74
CSTF3-202ENST00000431742 GLI3P10071 1580 aa19.67■□□□□ 0.74
CSTF3-202ENST00000431742 FBLN1P23142 703 aa19.67■□□□□ 0.74
CSTF3-202ENST00000431742 DDX10Q13206 875 aaKnown RBP19.67■□□□□ 0.74
CSTF3-202ENST00000431742 ZNF772Q68DY9 489 aaPredicted RBP19.67■□□□□ 0.74
CSTF3-202ENST00000431742 BTG4Q9NY30 223 aa19.67■□□□□ 0.74
CSTF3-202ENST00000431742 USP21Q9UK80 565 aa19.67■□□□□ 0.74
CSTF3-202ENST00000431742 KIF24Q5T7B8 1368 aa19.67■□□□□ 0.74
CSTF3-202ENST00000431742 RGPD2P0DJD1 1756 aa19.66■□□□□ 0.74
CSTF3-202ENST00000431742 UNC5CLQ8IV45 518 aa19.66■□□□□ 0.74
CSTF3-202ENST00000431742 BLMP54132 1417 aaPredicted RBP19.66■□□□□ 0.74
CSTF3-202ENST00000431742 RRS1Q15050 365 aaKnown RBP19.64■□□□□ 0.73
CSTF3-202ENST00000431742 CC2D1BQ5T0F9 858 aaKnown RBP19.64■□□□□ 0.73
CSTF3-202ENST00000431742 MORC1Q86VD1 984 aa19.64■□□□□ 0.73
CSTF3-202ENST00000431742 AXIN2Q9Y2T1 843 aa19.64■□□□□ 0.73
CSTF3-202ENST00000431742 ZBTB7CA1YPR0 619 aa19.63■□□□□ 0.73
CSTF3-202ENST00000431742 CDK12Q9NYV4 1490 aaPredicted RBP19.62■□□□□ 0.73
CSTF3-202ENST00000431742 FLT4P35916 1363 aa19.62■□□□□ 0.73
CSTF3-202ENST00000431742 VPS72Q15906 364 aa19.62■□□□□ 0.73
CSTF3-202ENST00000431742 POTEAQ6S8J7 498 aa19.62■□□□□ 0.73
CSTF3-202ENST00000431742 IP6K1Q92551 441 aa19.62■□□□□ 0.73
CSTF3-202ENST00000431742 TRPC5Q9UL62 973 aaPredicted RBP19.61■□□□□ 0.73
CSTF3-202ENST00000431742 EMILIN1Q9Y6C2 1016 aa19.61■□□□□ 0.73
CSTF3-202ENST00000431742 PARD3Q8TEW0 1356 aa19.6■□□□□ 0.73
CSTF3-202ENST00000431742 HOXC9P31274 260 aa19.6■□□□□ 0.73
CSTF3-202ENST00000431742 POLKQ9UBT6 870 aa19.6■□□□□ 0.73
CSTF3-202ENST00000431742 CRB1P82279 1406 aa19.59■□□□□ 0.73
CSTF3-202ENST00000431742 INSRP06213 1382 aa19.59■□□□□ 0.73
CSTF3-202ENST00000431742 THSD7AQ9UPZ6 1657 aa19.59■□□□□ 0.73
CSTF3-202ENST00000431742 ERBB3P21860 1342 aa19.59■□□□□ 0.73
CSTF3-202ENST00000431742 TNNT2P45379 298 aaPredicted RBP19.59■□□□□ 0.73
CSTF3-202ENST00000431742 QTRT2Q9H974 415 aaKnown RBP19.59■□□□□ 0.73
CSTF3-202ENST00000431742 WDR17Q8IZU2 1322 aa19.58■□□□□ 0.73
CSTF3-202ENST00000431742 AMPHP49418 695 aa19.58■□□□□ 0.72
CSTF3-202ENST00000431742 SPATA31A5Q5VU36 1347 aa19.57■□□□□ 0.72
CSTF3-202ENST00000431742 SPATA31A7Q8IWB4 1347 aa19.57■□□□□ 0.72
CSTF3-202ENST00000431742 STRN4Q9NRL3 753 aa19.57■□□□□ 0.72
CSTF3-202ENST00000431742 RGPD1P0DJD0 1748 aa19.56■□□□□ 0.72
CSTF3-202ENST00000431742 BRWD3Q6RI45 1802 aa19.56■□□□□ 0.72
CSTF3-202ENST00000431742 LARP1Q6PKG0 1096 aaKnown RBP19.56■□□□□ 0.72
CSTF3-202ENST00000431742 GJD4Q96KN9 370 aaPredicted RBP19.56■□□□□ 0.72
CSTF3-202ENST00000431742 PARP4Q9UKK3 1724 aaKnown RBP19.56■□□□□ 0.72
CSTF3-202ENST00000431742 SPATA31A1Q5TZJ5 1347 aa19.55■□□□□ 0.72
CSTF3-202ENST00000431742 EVA1CP58658 441 aa19.55■□□□□ 0.72
CSTF3-202ENST00000431742 RBM6P78332 1123 aaKnown RBP19.55■□□□□ 0.72
CSTF3-202ENST00000431742 COL3A1P02461 1466 aaPredicted RBP19.54■□□□□ 0.72
CSTF3-202ENST00000431742 HSP90AB2PQ58FF8 381 aa19.54■□□□□ 0.72
CSTF3-202ENST00000431742 ANKRD24Q8TF21 1146 aa19.54■□□□□ 0.72
CSTF3-202ENST00000431742 CNGB1Q14028 1251 aaPredicted RBP19.53■□□□□ 0.72
CSTF3-202ENST00000431742 RGS12O14924 1447 aa19.52■□□□□ 0.72
CSTF3-202ENST00000431742 NCAPD2Q15021 1401 aa19.52■□□□□ 0.72
CSTF3-202ENST00000431742 LRRC37A3O60309 1634 aa19.52■□□□□ 0.72
CSTF3-202ENST00000431742 RXRBP28702 533 aa19.52■□□□□ 0.72
CSTF3-202ENST00000431742 PPM1GO15355 546 aaPredicted RBP19.51■□□□□ 0.71
CSTF3-202ENST00000431742 CARD10Q9BWT7 1032 aa19.51■□□□□ 0.71
CSTF3-202ENST00000431742 DISP2A7MBM2 1401 aa19.51■□□□□ 0.71
CSTF3-202ENST00000431742 PPP2R1AP30153 589 aa19.5■□□□□ 0.71
CSTF3-202ENST00000431742 MTHFSP49914 203 aa19.5■□□□□ 0.71
CSTF3-202ENST00000431742 TOM1L2Q6ZVM7 507 aa19.5■□□□□ 0.71
CSTF3-202ENST00000431742 CCDC9Q9Y3X0 531 aaKnown RBP19.5■□□□□ 0.71
CSTF3-202ENST00000431742 CSB-PGBD3P0DP91 1061 aa19.49■□□□□ 0.71
CSTF3-202ENST00000431742 RALBP1Q15311 655 aa19.49■□□□□ 0.71
CSTF3-202ENST00000431742 ONECUT3O60422 494 aaPredicted RBP19.48■□□□□ 0.71
CSTF3-202ENST00000431742 BARGINQ6ZT62 677 aa19.48■□□□□ 0.71
CSTF3-202ENST00000431742 TCP11L2Q8N4U5 519 aa19.48■□□□□ 0.71
CSTF3-202ENST00000431742 LTV1Q96GA3 475 aaPredicted RBP19.48■□□□□ 0.71
CSTF3-202ENST00000431742 THRAP3Q9Y2W1 955 aaKnown RBP19.48■□□□□ 0.71
CSTF3-202ENST00000431742 SHANK3Q9BYB0 1731 aa19.48■□□□□ 0.71
CSTF3-202ENST00000431742 EIF4A2Q14240 407 aaKnown RBP19.47■□□□□ 0.71
CSTF3-202ENST00000431742 PRKRIP1Q9H875 184 aaPredicted RBP19.46■□□□□ 0.71
CSTF3-202ENST00000431742 NLRP2Q9NX02 1062 aa19.46■□□□□ 0.71
CSTF3-202ENST00000431742 PKD1L3Q7Z443 1732 aa19.45■□□□□ 0.7
CSTF3-202ENST00000431742 FAM98CQ17RN3 349 aaKnown RBP19.45■□□□□ 0.7
CSTF3-202ENST00000431742 USP35Q9P2H5 1018 aa19.45■□□□□ 0.7
CSTF3-202ENST00000431742 NBPF6Q5VWK0 638 aa19.44■□□□□ 0.7
CSTF3-202ENST00000431742 NBPF4Q96M43 638 aa19.44■□□□□ 0.7
CSTF3-202ENST00000431742 MEGF6O75095 1541 aa19.43■□□□□ 0.7
CSTF3-202ENST00000431742 IGSF1Q8N6C5 1336 aa19.43■□□□□ 0.7
CSTF3-202ENST00000431742 MYBBP1AQ9BQG0 1328 aaKnown RBP19.43■□□□□ 0.7
CSTF3-202ENST00000431742 IL13P35225 146 aa19.42■□□□□ 0.7
CSTF3-202ENST00000431742 ILDR2Q71H61 639 aa19.42■□□□□ 0.7
CSTF3-202ENST00000431742 SEPT12Q8IYM1 358 aa19.41■□□□□ 0.7
CSTF3-202ENST00000431742 EYA1Q99502 592 aa19.41■□□□□ 0.7
CSTF3-202ENST00000431742 TNS2Q63HR2 1409 aa19.41■□□□□ 0.7
CSTF3-202ENST00000431742 CDCA7Q9BWT1 371 aaPredicted RBP19.4■□□□□ 0.7
CSTF3-202ENST00000431742 KDRP35968 1356 aa19.4■□□□□ 0.7
CSTF3-202ENST00000431742 OVOS2A0A0G2JMS6 1433 aa19.4■□□□□ 0.7
CSTF3-202ENST00000431742 USHBP1Q8N6Y0 703 aa19.39■□□□□ 0.69
CSTF3-202ENST00000431742 DIAPH1O60610 1272 aaKnown RBP19.38■□□□□ 0.69
CSTF3-202ENST00000431742 CFAP53Q96M91 514 aa19.38■□□□□ 0.69
CSTF3-202ENST00000431742 PLEKHG2Q9H7P9 1386 aa19.38■□□□□ 0.69
CSTF3-202ENST00000431742 SBF2Q86WG5 1849 aa19.37■□□□□ 0.69
CSTF3-202ENST00000431742 IL2RBP14784 551 aa19.37■□□□□ 0.69
CSTF3-202ENST00000431742 EP400Q96L91 3159 aa19.35■□□□□ 0.69
CSTF3-202ENST00000431742 A0A0G2JS52 829 aa19.34■□□□□ 0.69
CSTF3-202ENST00000431742 MYT1Q01538 1121 aa19.34■□□□□ 0.69
CSTF3-202ENST00000431742 ANP32CO43423 234 aa19.33■□□□□ 0.68
CSTF3-202ENST00000431742 AEBP1Q8IUX7 1158 aa19.33■□□□□ 0.68
CSTF3-202ENST00000431742 VIRMAQ69YN4 1812 aaKnown RBP19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms