RNA–Protein interactions for RNA: ENST00000431473.3

RIMKLA-202, Transcript of ribosomal modification protein rimK like family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIMKLA, Length 8,909 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIMKLA-202ENST00000431473 CBX1P83916 185 aa13.87□□□□□ -0.19
RIMKLA-202ENST00000431473 TANGO6Q9C0B7 1094 aa13.87□□□□□ -0.19
RIMKLA-202ENST00000431473 ANKRD1Q15327 319 aa13.86□□□□□ -0.19
RIMKLA-202ENST00000431473 TMEM132AQ24JP5 1023 aa13.86□□□□□ -0.19
RIMKLA-202ENST00000431473 MCM4P33991 863 aa13.86□□□□□ -0.19
RIMKLA-202ENST00000431473 JMYQ8N9B5 988 aa13.86□□□□□ -0.19
RIMKLA-202ENST00000431473 RRBP1Q9P2E9 1410 aaKnown RBP13.86□□□□□ -0.19
RIMKLA-202ENST00000431473 CWC27Q6UX04 472 aaKnown RBP13.86□□□□□ -0.19
RIMKLA-202ENST00000431473 PDCL2Q8N4E4 241 aa13.86□□□□□ -0.19
RIMKLA-202ENST00000431473 ERLIN1O75477 346 aa13.86□□□□□ -0.19
RIMKLA-202ENST00000431473 SMG6Q86US8 1419 aaKnown RBP13.85□□□□□ -0.19
RIMKLA-202ENST00000431473 FILIP1Q7Z7B0 1213 aa13.85□□□□□ -0.19
RIMKLA-202ENST00000431473 ZHX3Q9H4I2 956 aa13.85□□□□□ -0.19
RIMKLA-202ENST00000431473 STIM1Q13586 685 aa13.85□□□□□ -0.19
RIMKLA-202ENST00000431473 ERC1Q8IUD2 1116 aa13.85□□□□□ -0.19
RIMKLA-202ENST00000431473 KRI1Q8N9T8 703 aaKnown RBP13.84□□□□□ -0.19
RIMKLA-202ENST00000431473 MVPQ14764 893 aaKnown RBP13.84□□□□□ -0.19
RIMKLA-202ENST00000431473 GOLGA6L7A0A1B0GV03 622 aa13.84□□□□□ -0.19
RIMKLA-202ENST00000431473 KIF6Q6ZMV9 814 aa13.84□□□□□ -0.19
RIMKLA-202ENST00000431473 NUP62CLQ9H1M0 184 aa13.84□□□□□ -0.19
RIMKLA-202ENST00000431473 DACH1Q9UI36 760 aa13.84□□□□□ -0.19
RIMKLA-202ENST00000431473 NCOA2Q15596 1464 aa13.84□□□□□ -0.19
RIMKLA-202ENST00000431473 SLC3A2P08195 630 aaKnown RBP13.84□□□□□ -0.19
RIMKLA-202ENST00000431473 ZRSR2Q15696 482 aaKnown RBP13.84□□□□□ -0.19
RIMKLA-202ENST00000431473 NLRP2Q9NX02 1062 aa13.84□□□□□ -0.19
RIMKLA-202ENST00000431473 CCDC69A6NI79 296 aa13.84□□□□□ -0.19
RIMKLA-202ENST00000431473 CASTP20810 708 aaKnown RBP13.84□□□□□ -0.19
RIMKLA-202ENST00000431473 ATP2B2Q01814 1243 aa13.83□□□□□ -0.19
RIMKLA-202ENST00000431473 PIP4K2AP48426 406 aaPredicted RBP13.83□□□□□ -0.2
RIMKLA-202ENST00000431473 CBFA2T2O43439 604 aa13.83□□□□□ -0.2
RIMKLA-202ENST00000431473 PRKCSHP14314 528 aaPredicted RBP13.83□□□□□ -0.2
RIMKLA-202ENST00000431473 SEPT11Q9NVA2 429 aaKnown RBP13.83□□□□□ -0.2
RIMKLA-202ENST00000431473 FYCO1Q9BQS8 1478 aa13.83□□□□□ -0.2
RIMKLA-202ENST00000431473 NUP133Q8WUM0 1156 aa13.83□□□□□ -0.2
RIMKLA-202ENST00000431473 ANKRD50Q9ULJ7 1429 aa13.83□□□□□ -0.2
RIMKLA-202ENST00000431473 CNNM1Q9NRU3 951 aa13.82□□□□□ -0.2
RIMKLA-202ENST00000431473 UPF3BQ9BZI7 483 aaKnown RBP13.82□□□□□ -0.2
RIMKLA-202ENST00000431473 PDRG1Q9NUG6 133 aa13.82□□□□□ -0.2
RIMKLA-202ENST00000431473 TAF3Q5VWG9 929 aa13.82□□□□□ -0.2
RIMKLA-202ENST00000431473 LUC7LQ9NQ29 371 aaKnown RBP13.82□□□□□ -0.2
RIMKLA-202ENST00000431473 CFAP45Q9UL16 551 aa13.82□□□□□ -0.2
RIMKLA-202ENST00000431473 IQCEQ6IPM2 695 aa13.82□□□□□ -0.2
RIMKLA-202ENST00000431473 FANCD2Q9BXW9 1451 aa13.82□□□□□ -0.2
RIMKLA-202ENST00000431473 ABTB2Q8N961 1025 aa13.82□□□□□ -0.2
RIMKLA-202ENST00000431473 JAKMIP1Q96N16 626 aaKnown RBP13.82□□□□□ -0.2
RIMKLA-202ENST00000431473 ATF7IPQ6VMQ6 1270 aa13.82□□□□□ -0.2
RIMKLA-202ENST00000431473 FKBP4Q02790 459 aaKnown RBP eCLIP13.82□□□□□ -0.2
RIMKLA-202ENST00000431473 CCDC158Q5M9N0 1113 aa13.82□□□□□ -0.2
RIMKLA-202ENST00000431473 KIAA1328Q86T90 577 aa13.82□□□□□ -0.2
RIMKLA-202ENST00000431473 TRIM22Q8IYM9 498 aa13.81□□□□□ -0.2
RIMKLA-202ENST00000431473 MYL6BP14649 208 aa13.81□□□□□ -0.2
RIMKLA-202ENST00000431473 ZSCAN30Q86W11 494 aa13.81□□□□□ -0.2
RIMKLA-202ENST00000431473 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.81□□□□□ -0.2
RIMKLA-202ENST00000431473 DHX8Q14562 1220 aaKnown RBP13.81□□□□□ -0.2
RIMKLA-202ENST00000431473 PTPRGP23470 1445 aa13.81□□□□□ -0.2
RIMKLA-202ENST00000431473 AACSQ86V21 672 aa13.8□□□□□ -0.2
RIMKLA-202ENST00000431473 CCT4P50991 539 aaKnown RBP13.8□□□□□ -0.2
RIMKLA-202ENST00000431473 NLRP6P59044 892 aa13.8□□□□□ -0.2
RIMKLA-202ENST00000431473 MAP3K11Q16584 847 aa13.8□□□□□ -0.2
RIMKLA-202ENST00000431473 SKAP1Q86WV1 359 aa13.8□□□□□ -0.2
RIMKLA-202ENST00000431473 SPINK5Q9NQ38 1064 aaPredicted RBP13.8□□□□□ -0.2
RIMKLA-202ENST00000431473 CFAP100Q494V2 611 aa13.79□□□□□ -0.2
RIMKLA-202ENST00000431473 MEX3CQ5U5Q3 659 aaKnown RBP13.79□□□□□ -0.2
RIMKLA-202ENST00000431473 CEP57L1Q8IYX8 460 aa13.79□□□□□ -0.2
RIMKLA-202ENST00000431473 FGD5Q6ZNL6 1462 aa13.79□□□□□ -0.2
RIMKLA-202ENST00000431473 GAS2L2Q8NHY3 880 aa13.79□□□□□ -0.2
RIMKLA-202ENST00000431473 CADPSQ9ULU8 1353 aa13.79□□□□□ -0.2
RIMKLA-202ENST00000431473 CFTRP13569 1480 aa13.79□□□□□ -0.2
RIMKLA-202ENST00000431473 GAPVD1Q14C86 1478 aa13.79□□□□□ -0.2
RIMKLA-202ENST00000431473 GBP2P32456 591 aaPredicted RBP13.79□□□□□ -0.2
RIMKLA-202ENST00000431473 CCDC184Q52MB2 194 aa13.79□□□□□ -0.2
RIMKLA-202ENST00000431473 PIBF1Q8WXW3 757 aa13.79□□□□□ -0.2
RIMKLA-202ENST00000431473 EPB41L2O43491 1005 aaKnown RBP13.79□□□□□ -0.2
RIMKLA-202ENST00000431473 XPCQ01831 940 aaPredicted RBP13.79□□□□□ -0.2
RIMKLA-202ENST00000431473 HDGFL1Q5TGJ6 251 aa13.79□□□□□ -0.2
RIMKLA-202ENST00000431473 KLHL34Q8N239 644 aa13.79□□□□□ -0.2
RIMKLA-202ENST00000431473 DDX11Q96FC9 970 aa13.79□□□□□ -0.2
RIMKLA-202ENST00000431473 BLOC1S2Q6QNY1 142 aa13.79□□□□□ -0.2
RIMKLA-202ENST00000431473 UBXN4Q92575 508 aa13.78□□□□□ -0.2
RIMKLA-202ENST00000431473 CASQ1P31415 396 aa13.78□□□□□ -0.2
RIMKLA-202ENST00000431473 IBSPP21815 317 aaPredicted RBP13.78□□□□□ -0.2
RIMKLA-202ENST00000431473 PNISRQ8TF01 805 aaKnown RBP13.78□□□□□ -0.2
RIMKLA-202ENST00000431473 ERICH3Q5RHP9 1530 aa13.78□□□□□ -0.2
RIMKLA-202ENST00000431473 NBPF1Q3BBV0 1214 aa13.78□□□□□ -0.2
RIMKLA-202ENST00000431473 PDCL3Q9H2J4 239 aa13.78□□□□□ -0.2
RIMKLA-202ENST00000431473 TMX1Q9H3N1 280 aa13.78□□□□□ -0.2
RIMKLA-202ENST00000431473 PTPN14Q15678 1187 aa13.77□□□□□ -0.2
RIMKLA-202ENST00000431473 TMCO3Q6UWJ1 677 aa13.77□□□□□ -0.2
RIMKLA-202ENST00000431473 SCAPERQ9BY12 1400 aa13.77□□□□□ -0.2
RIMKLA-202ENST00000431473 TXLNBQ8N3L3 684 aa13.77□□□□□ -0.2
RIMKLA-202ENST00000431473 ARHGAP29Q52LW3 1261 aa13.77□□□□□ -0.21
RIMKLA-202ENST00000431473 PAF1Q8N7H5 531 aa13.77□□□□□ -0.21
RIMKLA-202ENST00000431473 SRCIN1Q9C0H9 1055 aa13.76□□□□□ -0.21
RIMKLA-202ENST00000431473 SRGAP3O43295 1099 aa13.76□□□□□ -0.21
RIMKLA-202ENST00000431473 USP8P40818 1118 aa13.76□□□□□ -0.21
RIMKLA-202ENST00000431473 CFAP70Q5T0N1 1121 aa13.76□□□□□ -0.21
RIMKLA-202ENST00000431473 SULT6B1Q6IMI4 303 aa13.76□□□□□ -0.21
RIMKLA-202ENST00000431473 DYDC1Q8WWB3 177 aa13.76□□□□□ -0.21
RIMKLA-202ENST00000431473 ERBINQ96RT1 1412 aa13.76□□□□□ -0.21
RIMKLA-202ENST00000431473 SMTNL1A8MU46 457 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms