RNA–Protein interactions for RNA: ENST00000430841.6

ECHDC1-207, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 1,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-207ENST00000430841 TECPR2O15040 1411 aa11.67□□□□□ -0.54
ECHDC1-207ENST00000430841 HOXB3P14651 431 aaPredicted RBP11.66□□□□□ -0.54
ECHDC1-207ENST00000430841 DPY19L2Q6NUT2 758 aa11.66□□□□□ -0.54
ECHDC1-207ENST00000430841 ABCA3Q99758 1704 aa11.66□□□□□ -0.54
ECHDC1-207ENST00000430841 FAM98CQ17RN3 349 aaKnown RBP11.65□□□□□ -0.54
ECHDC1-207ENST00000430841 CABLES1Q8TDN4 633 aa11.65□□□□□ -0.54
ECHDC1-207ENST00000430841 POGKQ9P215 609 aa11.65□□□□□ -0.54
ECHDC1-207ENST00000430841 YTHDC2Q9H6S0 1430 aaKnown RBP11.65□□□□□ -0.54
ECHDC1-207ENST00000430841 GPRASP1Q5JY77 1395 aa11.65□□□□□ -0.55
ECHDC1-207ENST00000430841 ABCC11Q96J66 1382 aa11.65□□□□□ -0.55
ECHDC1-207ENST00000430841 ADGRF5Q8IZF2 1346 aa11.64□□□□□ -0.55
ECHDC1-207ENST00000430841 HRCP23327 699 aa11.64□□□□□ -0.55
ECHDC1-207ENST00000430841 TMEM132EQ6IEE7 984 aa11.64□□□□□ -0.55
ECHDC1-207ENST00000430841 SBNO1A3KN83 1393 aa11.64□□□□□ -0.55
ECHDC1-207ENST00000430841 EIF3AQ14152 1382 aaKnown RBP11.64□□□□□ -0.55
ECHDC1-207ENST00000430841 DHX57Q6P158 1386 aaKnown RBP11.64□□□□□ -0.55
ECHDC1-207ENST00000430841 SAFB2Q14151 953 aaKnown RBP eCLIP11.63□□□□□ -0.55
ECHDC1-207ENST00000430841 PLEKHH1Q9ULM0 1364 aa11.63□□□□□ -0.55
ECHDC1-207ENST00000430841 RGPD8O14715 1765 aaPredicted RBP11.62□□□□□ -0.55
ECHDC1-207ENST00000430841 COL14A1Q05707 1796 aaKnown RBP11.62□□□□□ -0.55
ECHDC1-207ENST00000430841 R3HDM1Q15032 1099 aaKnown RBP11.62□□□□□ -0.55
ECHDC1-207ENST00000430841 BTG4Q9NY30 223 aa11.62□□□□□ -0.55
ECHDC1-207ENST00000430841 NRXN1Q9ULB1 1477 aa11.62□□□□□ -0.55
ECHDC1-207ENST00000430841 PIK3C2GO75747 1445 aa11.61□□□□□ -0.55
ECHDC1-207ENST00000430841 EN1Q05925 392 aaPredicted RBP11.61□□□□□ -0.55
ECHDC1-207ENST00000430841 C3orf67Q6ZVT6 689 aa11.61□□□□□ -0.55
ECHDC1-207ENST00000430841 PPP1R1BQ9UD71 204 aaPredicted RBP11.61□□□□□ -0.55
ECHDC1-207ENST00000430841 ANKARQ7Z5J8 1434 aa11.6□□□□□ -0.55
ECHDC1-207ENST00000430841 PMFBP1Q8TBY8 1022 aa11.6□□□□□ -0.55
ECHDC1-207ENST00000430841 PRDM11Q9NQV5 511 aa11.6□□□□□ -0.55
ECHDC1-207ENST00000430841 NRAPQ86VF7 1730 aa11.6□□□□□ -0.55
ECHDC1-207ENST00000430841 ONECUT3O60422 494 aaPredicted RBP11.59□□□□□ -0.55
ECHDC1-207ENST00000430841 PRAM1Q96QH2 718 aa11.59□□□□□ -0.55
ECHDC1-207ENST00000430841 YY1P25490 414 aa11.58□□□□□ -0.56
ECHDC1-207ENST00000430841 NBPF8Q3BBV2 869 aa11.58□□□□□ -0.56
ECHDC1-207ENST00000430841 NBPF14Q5TI25 921 aa11.58□□□□□ -0.56
ECHDC1-207ENST00000430841 NGDNQ8NEJ9 315 aaKnown RBP11.58□□□□□ -0.56
ECHDC1-207ENST00000430841 L3MBTL3Q96JM7 780 aaPredicted RBP11.58□□□□□ -0.56
ECHDC1-207ENST00000430841 PARD3Q8TEW0 1356 aa11.57□□□□□ -0.56
ECHDC1-207ENST00000430841 FAM83GA6ND36 823 aa11.57□□□□□ -0.56
ECHDC1-207ENST00000430841 SIRT1Q96EB6 747 aa11.57□□□□□ -0.56
ECHDC1-207ENST00000430841 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.57□□□□□ -0.563e-7■■□□□ 13.1
ECHDC1-207ENST00000430841 PDE3BQ13370 1112 aa11.56□□□□□ -0.56
ECHDC1-207ENST00000430841 FAM182BQ5T319 152 aa11.56□□□□□ -0.56
ECHDC1-207ENST00000430841 FAM196AQ6ZSG2 479 aa11.56□□□□□ -0.56
ECHDC1-207ENST00000430841 SPATA31E1Q6ZUB1 1445 aa11.56□□□□□ -0.56
ECHDC1-207ENST00000430841 TNS1Q9HBL0 1735 aaKnown RBP11.56□□□□□ -0.56
ECHDC1-207ENST00000430841 STRN4Q9NRL3 753 aa11.56□□□□□ -0.56
ECHDC1-207ENST00000430841 DISP2A7MBM2 1401 aa11.55□□□□□ -0.56
ECHDC1-207ENST00000430841 TRIM37O94972 964 aa11.55□□□□□ -0.56
ECHDC1-207ENST00000430841 APBA3O96018 575 aa11.55□□□□□ -0.56
ECHDC1-207ENST00000430841 EVA1CP58658 441 aa11.55□□□□□ -0.56
ECHDC1-207ENST00000430841 SPATA31A5Q5VU36 1347 aa11.55□□□□□ -0.56
ECHDC1-207ENST00000430841 SPATA31A7Q8IWB4 1347 aa11.55□□□□□ -0.56
ECHDC1-207ENST00000430841 ACIN1Q9UKV3 1341 aaKnown RBP11.55□□□□□ -0.56
ECHDC1-207ENST00000430841 ITSN1Q15811 1721 aa11.55□□□□□ -0.56
ECHDC1-207ENST00000430841 EZH2Q15910 746 aaKnown RBP11.54□□□□□ -0.56
ECHDC1-207ENST00000430841 DLC1Q96QB1 1528 aa11.54□□□□□ -0.56
ECHDC1-207ENST00000430841 ALS2Q96Q42 1657 aa11.53□□□□□ -0.56
ECHDC1-207ENST00000430841 THSD7AQ9UPZ6 1657 aa11.53□□□□□ -0.56
ECHDC1-207ENST00000430841 TRPM3Q9HCF6 1732 aaPredicted RBP11.53□□□□□ -0.56
ECHDC1-207ENST00000430841 MKRN3Q13064 507 aaKnown RBP11.53□□□□□ -0.56
ECHDC1-207ENST00000430841 CFAP70Q5T0N1 1121 aa11.53□□□□□ -0.56
ECHDC1-207ENST00000430841 MPHOSPH9Q99550 1183 aa11.53□□□□□ -0.56
ECHDC1-207ENST00000430841 HIRIP3Q9BW71 556 aaPredicted RBP11.53□□□□□ -0.56
ECHDC1-207ENST00000430841 C14orf93Q9H972 538 aaKnown RBP11.53□□□□□ -0.56
ECHDC1-207ENST00000430841 USP35Q9P2H5 1018 aa11.53□□□□□ -0.56
ECHDC1-207ENST00000430841 TULP4Q9NRJ4 1543 aa11.53□□□□□ -0.56
ECHDC1-207ENST00000430841 MINK1Q8N4C8 1332 aaPredicted RBP11.53□□□□□ -0.56
ECHDC1-207ENST00000430841 HOXB1P14653 301 aaPredicted RBP11.51□□□□□ -0.57
ECHDC1-207ENST00000430841 PSEN1P49768 467 aa11.51□□□□□ -0.57
ECHDC1-207ENST00000430841 SPON1Q9HCB6 807 aa11.51□□□□□ -0.57
ECHDC1-207ENST00000430841 TRAK1Q9UPV9 953 aa11.51□□□□□ -0.57
ECHDC1-207ENST00000430841 ATP7BP35670 1465 aa11.51□□□□□ -0.57
ECHDC1-207ENST00000430841 SPATA31A1Q5TZJ5 1347 aa11.5□□□□□ -0.57
ECHDC1-207ENST00000430841 KIAA0232Q92628 1395 aa11.5□□□□□ -0.57
ECHDC1-207ENST00000430841 C11orf95C9JLR9 678 aaPredicted RBP11.49□□□□□ -0.57
ECHDC1-207ENST00000430841 CHRNA2Q15822 529 aa11.49□□□□□ -0.57
ECHDC1-207ENST00000430841 PHRF1Q9P1Y6 1649 aaKnown RBP11.49□□□□□ -0.57
ECHDC1-207ENST00000430841 CHRM1P11229 460 aaPredicted RBP11.48□□□□□ -0.57
ECHDC1-207ENST00000430841 ZC3H6P61129 1189 aaKnown RBP11.48□□□□□ -0.57
ECHDC1-207ENST00000430841 PLCB2Q00722 1185 aa11.48□□□□□ -0.57
ECHDC1-207ENST00000430841 CAMKK2Q96RR4 588 aa11.48□□□□□ -0.57
ECHDC1-207ENST00000430841 NINLQ9Y2I6 1382 aa11.48□□□□□ -0.57
ECHDC1-207ENST00000430841 RREB1Q92766 1687 aa11.48□□□□□ -0.57
ECHDC1-207ENST00000430841 NUP188Q5SRE5 1749 aa11.47□□□□□ -0.57
ECHDC1-207ENST00000430841 CRYBG1Q9Y4K1 1723 aa11.47□□□□□ -0.57
ECHDC1-207ENST00000430841 ZBTB7CA1YPR0 619 aa11.47□□□□□ -0.57
ECHDC1-207ENST00000430841 WASLO00401 505 aaPredicted RBP11.47□□□□□ -0.57
ECHDC1-207ENST00000430841 ZNF467Q7Z7K2 595 aaPredicted RBP11.47□□□□□ -0.57
ECHDC1-207ENST00000430841 NUTM2GQ5VZR2 741 aa11.46□□□□□ -0.57
ECHDC1-207ENST00000430841 SSH2Q76I76 1423 aa11.45□□□□□ -0.58
ECHDC1-207ENST00000430841 KCNQ2O43526 872 aa11.45□□□□□ -0.58
ECHDC1-207ENST00000430841 TCP11L2Q8N4U5 519 aa11.45□□□□□ -0.58
ECHDC1-207ENST00000430841 RNF166Q96A37 237 aaPredicted RBP11.45□□□□□ -0.58
ECHDC1-207ENST00000430841 KDM2AQ9Y2K7 1162 aa11.45□□□□□ -0.58
ECHDC1-207ENST00000430841 BARGINQ6ZT62 677 aa11.44□□□□□ -0.58
ECHDC1-207ENST00000430841 BOLA1Q9Y3E2 137 aa11.44□□□□□ -0.58
ECHDC1-207ENST00000430841 OVOS2A0A0G2JMS6 1433 aa11.43□□□□□ -0.58
ECHDC1-207ENST00000430841 OVOS2A0A0J9YW53 1432 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms