RNA–Protein interactions for RNA: ENST00000430710.7

CHD8-202, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHD8, Length 7,420 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-202ENST00000430710 LRRCC1Q9C099 1032 aa7.33□□□□□ -1.24
CHD8-202ENST00000430710 C11orf95C9JLR9 678 aaPredicted RBP7.33□□□□□ -1.24
CHD8-202ENST00000430710 GNAI3P08754 354 aa7.33□□□□□ -1.24
CHD8-202ENST00000430710 FOSBP53539 338 aa7.33□□□□□ -1.24
CHD8-202ENST00000430710 SUPT6HQ7KZ85 1726 aaKnown RBP7.33□□□□□ -1.24
CHD8-202ENST00000430710 FMNL2Q96PY5 1086 aa7.33□□□□□ -1.24
CHD8-202ENST00000430710 LUC7LQ9NQ29 371 aaKnown RBP7.33□□□□□ -1.24
CHD8-202ENST00000430710 ZNHIT6Q9NWK9 470 aaKnown RBP7.33□□□□□ -1.24
CHD8-202ENST00000430710 CFAP45Q9UL16 551 aa7.33□□□□□ -1.24
CHD8-202ENST00000430710 CLEC11AQ9Y240 323 aa7.33□□□□□ -1.24
CHD8-202ENST00000430710 OFD1O75665 1012 aa7.33□□□□□ -1.24
CHD8-202ENST00000430710 CCDC183Q5T5S1 534 aa7.33□□□□□ -1.24
CHD8-202ENST00000430710 MAP3K11Q16584 847 aa7.32□□□□□ -1.24
CHD8-202ENST00000430710 FILIP1Q7Z7B0 1213 aa7.32□□□□□ -1.24
CHD8-202ENST00000430710 DDX11Q96FC9 970 aa7.32□□□□□ -1.24
CHD8-202ENST00000430710 EPS15P42566 896 aa7.32□□□□□ -1.24
CHD8-202ENST00000430710 ZHX1Q9UKY1 873 aaPredicted RBP7.32□□□□□ -1.24
CHD8-202ENST00000430710 UBTFL1P0CB47 393 aaPredicted RBP7.32□□□□□ -1.24
CHD8-202ENST00000430710 NBPF1Q3BBV0 1214 aa7.32□□□□□ -1.24
CHD8-202ENST00000430710 PPP4R3BQ5MIZ7 849 aa7.32□□□□□ -1.24
CHD8-202ENST00000430710 TCP11L2Q8N4U5 519 aa7.32□□□□□ -1.24
CHD8-202ENST00000430710 CYP46A1Q9Y6A2 500 aa7.32□□□□□ -1.24
CHD8-202ENST00000430710 PLEKHH1Q9ULM0 1364 aa7.32□□□□□ -1.24
CHD8-202ENST00000430710 BCAR3O75815 825 aa7.32□□□□□ -1.24
CHD8-202ENST00000430710 CLASRPQ8N2M8 674 aaKnown RBP7.32□□□□□ -1.24
CHD8-202ENST00000430710 MAGEC2Q9UBF1 373 aaPredicted RBP7.32□□□□□ -1.24
CHD8-202ENST00000430710 IGF1RP08069 1367 aa7.32□□□□□ -1.24
CHD8-202ENST00000430710 MCM3P25205 808 aa7.32□□□□□ -1.24
CHD8-202ENST00000430710 MAP9Q49MG5 647 aa7.32□□□□□ -1.24
CHD8-202ENST00000430710 CEP57L1Q8IYX8 460 aa7.32□□□□□ -1.24
CHD8-202ENST00000430710 SRCIN1Q9C0H9 1055 aa7.32□□□□□ -1.24
CHD8-202ENST00000430710 CTDP1Q9Y5B0 961 aaPredicted RBP7.32□□□□□ -1.24
CHD8-202ENST00000430710 SMTNL1A8MU46 457 aa7.32□□□□□ -1.24
CHD8-202ENST00000430710 STK38Q15208 465 aa7.32□□□□□ -1.24
CHD8-202ENST00000430710 AMOTL1Q8IY63 956 aa7.31□□□□□ -1.24
CHD8-202ENST00000430710 MPNDQ8N594 471 aa7.31□□□□□ -1.24
CHD8-202ENST00000430710 CCDC102AQ96A19 550 aa7.31□□□□□ -1.24
CHD8-202ENST00000430710 DNAJC2Q99543 621 aaKnown RBP7.31□□□□□ -1.24
CHD8-202ENST00000430710 TRIM34Q9BYJ4 488 aa7.31□□□□□ -1.24
CHD8-202ENST00000430710 CASKIN1Q8WXD9 1431 aa7.31□□□□□ -1.24
CHD8-202ENST00000430710 SHTN1A0MZ66 631 aa7.31□□□□□ -1.24
CHD8-202ENST00000430710 SKIDA1Q1XH10 827 aa7.31□□□□□ -1.24
CHD8-202ENST00000430710 NOL10Q9BSC4 688 aaKnown RBP7.31□□□□□ -1.24
CHD8-202ENST00000430710 GTPBP4Q9BZE4 634 aaKnown RBP7.31□□□□□ -1.24
CHD8-202ENST00000430710 NEMFO60524 1076 aa7.31□□□□□ -1.24
CHD8-202ENST00000430710 TTLL12Q14166 644 aaPredicted RBP7.31□□□□□ -1.24
CHD8-202ENST00000430710 ATF7IPQ6VMQ6 1270 aa7.31□□□□□ -1.24
CHD8-202ENST00000430710 PLCD4Q9BRC7 762 aa7.31□□□□□ -1.24
CHD8-202ENST00000430710 NOB1Q9ULX3 412 aaKnown RBP7.31□□□□□ -1.24
CHD8-202ENST00000430710 ZSCAN31Q96LW9 406 aaPredicted RBP7.3□□□□□ -1.24
CHD8-202ENST00000430710 TSPYL4Q9UJ04 414 aa7.3□□□□□ -1.24
CHD8-202ENST00000430710 EIF2S2P20042 333 aaKnown RBP7.3□□□□□ -1.24
CHD8-202ENST00000430710 CT47A1Q5JQC4 288 aaPredicted RBP7.3□□□□□ -1.24
CHD8-202ENST00000430710 CCDC181Q5TID7 509 aa7.3□□□□□ -1.24
CHD8-202ENST00000430710 LARP1BQ659C4 914 aaKnown RBP7.3□□□□□ -1.24
CHD8-202ENST00000430710 MINK1Q8N4C8 1332 aaPredicted RBP7.3□□□□□ -1.24
CHD8-202ENST00000430710 POLA1P09884 1462 aaPredicted RBP7.3□□□□□ -1.24
CHD8-202ENST00000430710 HSP90AB2PQ58FF8 381 aa7.3□□□□□ -1.24
CHD8-202ENST00000430710 ATAD2BQ9ULI0 1458 aa7.3□□□□□ -1.24
CHD8-202ENST00000430710 SPATA32Q96LK8 384 aa7.3□□□□□ -1.24
CHD8-202ENST00000430710 CRACR2AQ9BSW2 395 aa7.3□□□□□ -1.24
CHD8-202ENST00000430710 ZSCAN12O43309 604 aa7.3□□□□□ -1.24
CHD8-202ENST00000430710 GNAI2P04899 355 aa7.3□□□□□ -1.24
CHD8-202ENST00000430710 TXLNAP40222 546 aa7.3□□□□□ -1.24
CHD8-202ENST00000430710 NCOA2Q15596 1464 aa7.3□□□□□ -1.24
CHD8-202ENST00000430710 ME1P48163 572 aa7.3□□□□□ -1.24
CHD8-202ENST00000430710 ERC1Q8IUD2 1116 aa7.3□□□□□ -1.24
CHD8-202ENST00000430710 FAM177A1Q8N128 213 aaPredicted RBP7.3□□□□□ -1.24
CHD8-202ENST00000430710 TBC1D2Q9BYX2 928 aa7.3□□□□□ -1.24
CHD8-202ENST00000430710 PAXBP1Q9Y5B6 917 aa7.3□□□□□ -1.24
CHD8-202ENST00000430710 DHX29Q7Z478 1369 aaKnown RBP7.3□□□□□ -1.24
CHD8-202ENST00000430710 UPF3BQ9BZI7 483 aaKnown RBP7.29□□□□□ -1.24
CHD8-202ENST00000430710 TOM1O60784 492 aa7.29□□□□□ -1.24
CHD8-202ENST00000430710 TNNT1P13805 278 aa7.29□□□□□ -1.24
CHD8-202ENST00000430710 UVSSAQ2YD98 709 aa7.29□□□□□ -1.24
CHD8-202ENST00000430710 DYDC1Q8WWB3 177 aa7.29□□□□□ -1.24
CHD8-202ENST00000430710 CENPHQ9H3R5 247 aa7.29□□□□□ -1.24
CHD8-202ENST00000430710 TIAM1Q13009 1591 aa7.29□□□□□ -1.24
CHD8-202ENST00000430710 CEBPAP49715 358 aaPredicted RBP7.29□□□□□ -1.24
CHD8-202ENST00000430710 EXOSC9Q06265 439 aaKnown RBP7.29□□□□□ -1.24
CHD8-202ENST00000430710 ODF2Q5BJF6 829 aa7.29□□□□□ -1.24
CHD8-202ENST00000430710 TNPO1Q92973 898 aaKnown RBP7.29□□□□□ -1.24
CHD8-202ENST00000430710 PPP6R1Q9UPN7 881 aa7.29□□□□□ -1.24
CHD8-202ENST00000430710 NKTRP30414 1462 aaKnown RBP7.29□□□□□ -1.24
CHD8-202ENST00000430710 MTHFSP49914 203 aa7.29□□□□□ -1.24
CHD8-202ENST00000430710 FSD1Q9BTV5 496 aa7.29□□□□□ -1.24
CHD8-202ENST00000430710 SFPQP23246 707 aaKnown RBP eCLIP7.29□□□□□ -1.24
CHD8-202ENST00000430710 BMS1Q14692 1282 aaKnown RBP7.29□□□□□ -1.24
CHD8-202ENST00000430710 MICALCLQ6ZW33 695 aa7.29□□□□□ -1.24
CHD8-202ENST00000430710 BRPF1P55201 1214 aaPredicted RBP7.29□□□□□ -1.24
CHD8-202ENST00000430710 CCDC148Q8NFR7 591 aa7.29□□□□□ -1.24
CHD8-202ENST00000430710 CC2D2AQ9P2K1 1620 aa7.28□□□□□ -1.24
CHD8-202ENST00000430710 DMRT2Q9Y5R5 561 aa7.28□□□□□ -1.24
CHD8-202ENST00000430710 ANKRD50Q9ULJ7 1429 aa7.28□□□□□ -1.24
CHD8-202ENST00000430710 STIM1Q13586 685 aa7.28□□□□□ -1.24
CHD8-202ENST00000430710 KRT222Q8N1A0 295 aa7.28□□□□□ -1.24
CHD8-202ENST00000430710 POTEB2H3BUK9 544 aa7.28□□□□□ -1.24
CHD8-202ENST00000430710 SURF6O75683 361 aaKnown RBP7.28□□□□□ -1.24
CHD8-202ENST00000430710 CASQ1P31415 396 aa7.28□□□□□ -1.24
CHD8-202ENST00000430710 CEBPZQ03701 1054 aaKnown RBP7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms