RNA–Protein interactions for RNA: ENST00000430591.1

SMC6-205, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 5

Gene SMC6, Length 480 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-205ENST00000430591 SEC24BO95487 1268 aa9.44□□□□□ -0.9
SMC6-205ENST00000430591 LMOD2Q6P5Q4 547 aa9.44□□□□□ -0.9
SMC6-205ENST00000430591 ACEP12821 1306 aa9.44□□□□□ -0.9
SMC6-205ENST00000430591 PPIP5K1Q6PFW1 1433 aa9.43□□□□□ -0.9
SMC6-205ENST00000430591 SRPK2P78362 688 aaKnown RBP9.43□□□□□ -0.9
SMC6-205ENST00000430591 PSME1Q06323 249 aa9.43□□□□□ -0.9
SMC6-205ENST00000430591 CCER1Q8TC90 406 aaPredicted RBP9.43□□□□□ -0.9
SMC6-205ENST00000430591 PLCH1Q4KWH8 1693 aa9.42□□□□□ -0.9
SMC6-205ENST00000430591 NGDNQ8NEJ9 315 aaKnown RBP9.42□□□□□ -0.9
SMC6-205ENST00000430591 AKAP12Q02952 1782 aa9.42□□□□□ -0.9
SMC6-205ENST00000430591 PHRF1Q9P1Y6 1649 aaKnown RBP9.42□□□□□ -0.9
SMC6-205ENST00000430591 CABP1Q9NZU7 370 aa9.41□□□□□ -0.9
SMC6-205ENST00000430591 SBNO1A3KN83 1393 aa9.4□□□□□ -0.9
SMC6-205ENST00000430591 POLR3AO14802 1390 aaPredicted RBP9.4□□□□□ -0.9
SMC6-205ENST00000430591 PIK3C2AO00443 1686 aa9.4□□□□□ -0.9
SMC6-205ENST00000430591 ST20-MTHFSA0A0A6YYL1 179 aa9.4□□□□□ -0.9
SMC6-205ENST00000430591 TESK2Q96S53 571 aa9.4□□□□□ -0.9
SMC6-205ENST00000430591 NRKQ7Z2Y5 1582 aa9.4□□□□□ -0.9
SMC6-205ENST00000430591 CD163L1Q9NR16 1453 aa9.4□□□□□ -0.91
SMC6-205ENST00000430591 PLEKHG3A1L390 1219 aa9.39□□□□□ -0.91
SMC6-205ENST00000430591 RIOK3O14730 519 aaKnown RBP9.39□□□□□ -0.91
SMC6-205ENST00000430591 PDCD7Q8N8D1 485 aaKnown RBP9.39□□□□□ -0.91
SMC6-205ENST00000430591 NGLY1Q96IV0 654 aa9.39□□□□□ -0.91
SMC6-205ENST00000430591 BCL9LQ86UU0 1499 aa9.39□□□□□ -0.91
SMC6-205ENST00000430591 NRAPQ86VF7 1730 aa9.39□□□□□ -0.91
SMC6-205ENST00000430591 EIF3AQ14152 1382 aaKnown RBP9.38□□□□□ -0.91
SMC6-205ENST00000430591 SOCS7O14512 581 aa9.38□□□□□ -0.91
SMC6-205ENST00000430591 PLCG2P16885 1265 aa9.38□□□□□ -0.91
SMC6-205ENST00000430591 MON2Q7Z3U7 1717 aa9.38□□□□□ -0.91
SMC6-205ENST00000430591 RGS12O14924 1447 aa9.38□□□□□ -0.91
SMC6-205ENST00000430591 USP47Q96K76 1375 aa9.37□□□□□ -0.91
SMC6-205ENST00000430591 GLI3P10071 1580 aa9.37□□□□□ -0.91
SMC6-205ENST00000430591 EVC2Q86UK5 1308 aa9.37□□□□□ -0.91
SMC6-205ENST00000430591 SLIT2O94813 1529 aa9.37□□□□□ -0.91
SMC6-205ENST00000430591 FAM83GA6ND36 823 aa9.37□□□□□ -0.91
SMC6-205ENST00000430591 CHRNA2Q15822 529 aa9.37□□□□□ -0.91
SMC6-205ENST00000430591 OCEL1Q9H607 264 aa9.37□□□□□ -0.91
SMC6-205ENST00000430591 QTRT2Q9H974 415 aaKnown RBP9.37□□□□□ -0.91
SMC6-205ENST00000430591 USP6P35125 1406 aa9.37□□□□□ -0.91
SMC6-205ENST00000430591 SSH2Q76I76 1423 aa9.37□□□□□ -0.91
SMC6-205ENST00000430591 MYOM1P52179 1685 aa9.36□□□□□ -0.91
SMC6-205ENST00000430591 BRWD3Q6RI45 1802 aa9.36□□□□□ -0.91
SMC6-205ENST00000430591 SLC12A5Q9H2X9 1139 aa9.36□□□□□ -0.91
SMC6-205ENST00000430591 USP21Q9UK80 565 aa9.36□□□□□ -0.91
SMC6-205ENST00000430591 ATRNO75882 1429 aa9.36□□□□□ -0.91
SMC6-205ENST00000430591 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.36□□□□□ -0.91
SMC6-205ENST00000430591 ARHGEF10O15013 1369 aa9.36□□□□□ -0.91
SMC6-205ENST00000430591 RGPD5Q99666 1765 aa9.35□□□□□ -0.91
SMC6-205ENST00000430591 HAP1P54257 671 aaPredicted RBP9.35□□□□□ -0.91
SMC6-205ENST00000430591 ZC3H6P61129 1189 aaKnown RBP9.35□□□□□ -0.91
SMC6-205ENST00000430591 FNBP4Q8N3X1 1017 aaPredicted RBP9.35□□□□□ -0.91
SMC6-205ENST00000430591 SBNO2Q9Y2G9 1366 aa9.35□□□□□ -0.91
SMC6-205ENST00000430591 CLSPNQ9HAW4 1339 aa9.34□□□□□ -0.91
SMC6-205ENST00000430591 CPSF1Q10570 1443 aaKnown RBP9.34□□□□□ -0.91
SMC6-205ENST00000430591 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.34□□□□□ -0.91
SMC6-205ENST00000430591 SOX12O15370 315 aa9.34□□□□□ -0.91
SMC6-205ENST00000430591 ECM2O94769 699 aaPredicted RBP9.34□□□□□ -0.91
SMC6-205ENST00000430591 GOLGA2Q08379 1002 aa9.34□□□□□ -0.91
SMC6-205ENST00000430591 MKRN3Q13064 507 aaKnown RBP9.34□□□□□ -0.91
SMC6-205ENST00000430591 ZNF772Q68DY9 489 aaPredicted RBP9.34□□□□□ -0.91
SMC6-205ENST00000430591 TMC1Q8TDI8 760 aa9.34□□□□□ -0.91
SMC6-205ENST00000430591 ZFP91Q96JP5 570 aaPredicted RBP9.34□□□□□ -0.91
SMC6-205ENST00000430591 KIAA0232Q92628 1395 aa9.34□□□□□ -0.91
SMC6-205ENST00000430591 NWD2Q9ULI1 1742 aa9.34□□□□□ -0.92
SMC6-205ENST00000430591 COL14A1Q05707 1796 aaKnown RBP9.33□□□□□ -0.92
SMC6-205ENST00000430591 ZBTB7CA1YPR0 619 aa9.33□□□□□ -0.92
SMC6-205ENST00000430591 RXRBP28702 533 aa9.33□□□□□ -0.92
SMC6-205ENST00000430591 MAMSTRQ6ZN01 415 aa9.33□□□□□ -0.92
SMC6-205ENST00000430591 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.33□□□□□ -0.92
SMC6-205ENST00000430591 ABTB2Q8N961 1025 aa9.33□□□□□ -0.92
SMC6-205ENST00000430591 SCUBE2Q9NQ36 999 aa9.33□□□□□ -0.92
SMC6-205ENST00000430591 A0A1W2PP64 1363 aa9.33□□□□□ -0.92
SMC6-205ENST00000430591 LMO7Q8WWI1 1683 aa9.32□□□□□ -0.92
SMC6-205ENST00000430591 USP19O94966 1318 aa9.32□□□□□ -0.92
SMC6-205ENST00000430591 TTC21BQ7Z4L5 1316 aa9.32□□□□□ -0.92
SMC6-205ENST00000430591 COL18A1P39060 1754 aa9.32□□□□□ -0.92
SMC6-205ENST00000430591 SLIT3O75094 1523 aa9.32□□□□□ -0.92
SMC6-205ENST00000430591 RGL2O15211 777 aa9.32□□□□□ -0.92
SMC6-205ENST00000430591 HSPA5P11021 654 aaKnown RBP9.32□□□□□ -0.92
SMC6-205ENST00000430591 FBLN1P23142 703 aa9.32□□□□□ -0.92
SMC6-205ENST00000430591 NME9Q86XW9 330 aa9.32□□□□□ -0.92
SMC6-205ENST00000430591 BTG4Q9NY30 223 aa9.32□□□□□ -0.92
SMC6-205ENST00000430591 KTN1Q86UP2 1357 aaKnown RBP9.32□□□□□ -0.92
SMC6-205ENST00000430591 CAMTA1Q9Y6Y1 1673 aa9.32□□□□□ -0.92
SMC6-205ENST00000430591 C11orf95C9JLR9 678 aaPredicted RBP9.31□□□□□ -0.92
SMC6-205ENST00000430591 UNC5CLQ8IV45 518 aa9.31□□□□□ -0.92
SMC6-205ENST00000430591 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.31□□□□□ -0.921e-11■■■□□ 17.5
SMC6-205ENST00000430591 ATAD2Q6PL18 1390 aa9.31□□□□□ -0.92
SMC6-205ENST00000430591 NLRP6P59044 892 aa9.3□□□□□ -0.92
SMC6-205ENST00000430591 RBM6P78332 1123 aaKnown RBP9.3□□□□□ -0.92
SMC6-205ENST00000430591 EFCAB3Q8N7B9 438 aa9.3□□□□□ -0.92
SMC6-205ENST00000430591 PRDM11Q9NQV5 511 aa9.3□□□□□ -0.92
SMC6-205ENST00000430591 TRPC5Q9UL62 973 aaPredicted RBP9.3□□□□□ -0.92
SMC6-205ENST00000430591 NFAT5O94916 1531 aa9.3□□□□□ -0.92
SMC6-205ENST00000430591 GCP02774 474 aa9.29□□□□□ -0.92
SMC6-205ENST00000430591 GJD4Q96KN9 370 aaPredicted RBP9.29□□□□□ -0.92
SMC6-205ENST00000430591 STRN4Q9NRL3 753 aa9.29□□□□□ -0.92
SMC6-205ENST00000430591 LTN1O94822 1766 aa9.29□□□□□ -0.92
SMC6-205ENST00000430591 USP54Q70EL1 1684 aa9.29□□□□□ -0.92
SMC6-205ENST00000430591 FAM182BQ5T319 152 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms