RNA–Protein interactions for RNA: ENST00000429527.6

NEDD1-203, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD1, Length 3,366 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-203ENST00000429527 NUTM2FA1L443 756 aa12.96□□□□□ -0.33
NEDD1-203ENST00000429527 SRPK2P78362 688 aaKnown RBP12.96□□□□□ -0.34
NEDD1-203ENST00000429527 NLRP13Q86W25 1043 aa12.96□□□□□ -0.34
NEDD1-203ENST00000429527 CABP1Q9NZU7 370 aa12.95□□□□□ -0.34
NEDD1-203ENST00000429527 BARGINQ6ZT62 677 aa12.95□□□□□ -0.34
NEDD1-203ENST00000429527 CCDC125Q86Z20 511 aa12.95□□□□□ -0.34
NEDD1-203ENST00000429527 KIF7Q2M1P5 1343 aa12.95□□□□□ -0.34
NEDD1-203ENST00000429527 A0A1W2PP64 1363 aa12.95□□□□□ -0.34
NEDD1-203ENST00000429527 PLEKHG2Q9H7P9 1386 aa12.95□□□□□ -0.34
NEDD1-203ENST00000429527 PPP4R2Q9NY27 417 aa12.95□□□□□ -0.34
NEDD1-203ENST00000429527 SBF2Q86WG5 1849 aa12.95□□□□□ -0.34
NEDD1-203ENST00000429527 KIF24Q5T7B8 1368 aa12.94□□□□□ -0.34
NEDD1-203ENST00000429527 KIAA0232Q92628 1395 aa12.94□□□□□ -0.34
NEDD1-203ENST00000429527 THRAP3Q9Y2W1 955 aaKnown RBP12.94□□□□□ -0.34
NEDD1-203ENST00000429527 BLMP54132 1417 aaPredicted RBP12.94□□□□□ -0.34
NEDD1-203ENST00000429527 C11orf95C9JLR9 678 aaPredicted RBP12.94□□□□□ -0.34
NEDD1-203ENST00000429527 ADAMTS2O95450 1211 aa12.94□□□□□ -0.34
NEDD1-203ENST00000429527 KCNH5Q8NCM2 988 aa12.93□□□□□ -0.34
NEDD1-203ENST00000429527 RTL1A6NKG5 1358 aa12.93□□□□□ -0.34
NEDD1-203ENST00000429527 SPATA31A1Q5TZJ5 1347 aa12.93□□□□□ -0.34
NEDD1-203ENST00000429527 NCAPD2Q15021 1401 aa12.93□□□□□ -0.34
NEDD1-203ENST00000429527 CDCA8Q53HL2 280 aa12.92□□□□□ -0.34
NEDD1-203ENST00000429527 UPF1Q92900 1129 aaKnown RBP eCLIP12.92□□□□□ -0.34
NEDD1-203ENST00000429527 CRB1P82279 1406 aa12.92□□□□□ -0.34
NEDD1-203ENST00000429527 SHANK3Q9BYB0 1731 aa12.92□□□□□ -0.34
NEDD1-203ENST00000429527 ST20-MTHFSA0A0A6YYL1 179 aa12.9□□□□□ -0.34
NEDD1-203ENST00000429527 ARHGEF25Q86VW2 580 aa12.9□□□□□ -0.34
NEDD1-203ENST00000429527 GCP02774 474 aa12.9□□□□□ -0.34
NEDD1-203ENST00000429527 TERF2IPQ9NYB0 399 aa12.9□□□□□ -0.34
NEDD1-203ENST00000429527 NHSQ6T4R5 1651 aa12.89□□□□□ -0.35
NEDD1-203ENST00000429527 MSH5O43196 834 aa12.89□□□□□ -0.35
NEDD1-203ENST00000429527 TMF1P82094 1093 aa12.89□□□□□ -0.35
NEDD1-203ENST00000429527 ABTB2Q8N961 1025 aa12.89□□□□□ -0.35
NEDD1-203ENST00000429527 CABLES1Q8TDN4 633 aa12.89□□□□□ -0.35
NEDD1-203ENST00000429527 HDGFL2Q7Z4V5 671 aaPredicted RBP12.88□□□□□ -0.35
NEDD1-203ENST00000429527 PKD1L3Q7Z443 1732 aa12.88□□□□□ -0.35
NEDD1-203ENST00000429527 LRP5O75197 1615 aa12.87□□□□□ -0.35
NEDD1-203ENST00000429527 NUP188Q5SRE5 1749 aa12.87□□□□□ -0.35
NEDD1-203ENST00000429527 QSER1Q2KHR3 1735 aa12.86□□□□□ -0.35
NEDD1-203ENST00000429527 BTG4Q9NY30 223 aa12.86□□□□□ -0.35
NEDD1-203ENST00000429527 NSD2O96028 1365 aa12.86□□□□□ -0.35
NEDD1-203ENST00000429527 CDCA7Q9BWT1 371 aaPredicted RBP12.86□□□□□ -0.35
NEDD1-203ENST00000429527 HNRNPUQ00839 825 aaKnown RBP eCLIP12.85□□□□□ -0.35
NEDD1-203ENST00000429527 WDR17Q8IZU2 1322 aa12.85□□□□□ -0.35
NEDD1-203ENST00000429527 PARD3Q8TEW0 1356 aa12.85□□□□□ -0.35
NEDD1-203ENST00000429527 PRDM11Q9NQV5 511 aa12.85□□□□□ -0.35
NEDD1-203ENST00000429527 CCDC184Q52MB2 194 aa12.84□□□□□ -0.35
NEDD1-203ENST00000429527 TNS2Q63HR2 1409 aa12.83□□□□□ -0.35
NEDD1-203ENST00000429527 COL24A1Q17RW2 1714 aa12.83□□□□□ -0.36
NEDD1-203ENST00000429527 PAK3O75914 559 aaPredicted RBP12.83□□□□□ -0.36
NEDD1-203ENST00000429527 SEPT12Q8IYM1 358 aa12.83□□□□□ -0.36
NEDD1-203ENST00000429527 NLRP6P59044 892 aa12.82□□□□□ -0.36
NEDD1-203ENST00000429527 CARD10Q9BWT7 1032 aa12.82□□□□□ -0.36
NEDD1-203ENST00000429527 SLC12A5Q9H2X9 1139 aa12.82□□□□□ -0.36
NEDD1-203ENST00000429527 HAP1P54257 671 aaPredicted RBP12.82□□□□□ -0.36
NEDD1-203ENST00000429527 RGPD2P0DJD1 1756 aa12.82□□□□□ -0.36
NEDD1-203ENST00000429527 PAPPAQ13219 1627 aa12.81□□□□□ -0.36
NEDD1-203ENST00000429527 TCP11L2Q8N4U5 519 aa12.81□□□□□ -0.36
NEDD1-203ENST00000429527 NPC1L1Q9UHC9 1359 aa12.8□□□□□ -0.36
NEDD1-203ENST00000429527 NUDCQ9Y266 331 aa12.8□□□□□ -0.36
NEDD1-203ENST00000429527 ZNF831Q5JPB2 1677 aa12.8□□□□□ -0.36
NEDD1-203ENST00000429527 KRT27Q7Z3Y8 459 aa12.8□□□□□ -0.36
NEDD1-203ENST00000429527 MAP2P11137 1827 aaKnown RBP12.79□□□□□ -0.36
NEDD1-203ENST00000429527 CICQ96RK0 1608 aaPredicted RBP12.79□□□□□ -0.36
NEDD1-203ENST00000429527 PNISRQ8TF01 805 aaKnown RBP12.78□□□□□ -0.36
NEDD1-203ENST00000429527 IP6K1Q92551 441 aa12.78□□□□□ -0.36
NEDD1-203ENST00000429527 VIRMAQ69YN4 1812 aaKnown RBP12.78□□□□□ -0.36
NEDD1-203ENST00000429527 LY75O60449 1722 aa12.78□□□□□ -0.36
NEDD1-203ENST00000429527 NME9Q86XW9 330 aa12.78□□□□□ -0.36
NEDD1-203ENST00000429527 ERBB3P21860 1342 aa12.78□□□□□ -0.36
NEDD1-203ENST00000429527 OVOS2A0A0G2JMS6 1433 aa12.78□□□□□ -0.36
NEDD1-203ENST00000429527 LMOD2Q6P5Q4 547 aa12.78□□□□□ -0.36
NEDD1-203ENST00000429527 NSD3Q9BZ95 1437 aa12.77□□□□□ -0.36
NEDD1-203ENST00000429527 CASZ1Q86V15 1759 aa12.77□□□□□ -0.37
NEDD1-203ENST00000429527 FYB1O15117 783 aa12.77□□□□□ -0.37
NEDD1-203ENST00000429527 LARP1Q6PKG0 1096 aaKnown RBP12.77□□□□□ -0.37
NEDD1-203ENST00000429527 AXIN2Q9Y2T1 843 aa12.77□□□□□ -0.37
NEDD1-203ENST00000429527 CARD14Q9BXL6 1004 aa12.76□□□□□ -0.37
NEDD1-203ENST00000429527 ZC3H6P61129 1189 aaKnown RBP12.76□□□□□ -0.37
NEDD1-203ENST00000429527 CGNL1Q0VF96 1302 aa12.76□□□□□ -0.37
NEDD1-203ENST00000429527 RALBP1Q15311 655 aa12.75□□□□□ -0.37
NEDD1-203ENST00000429527 CHRNA2Q15822 529 aa12.75□□□□□ -0.37
NEDD1-203ENST00000429527 MRS2Q9HD23 443 aa12.75□□□□□ -0.37
NEDD1-203ENST00000429527 ADAMTS7Q9UKP4 1686 aa12.74□□□□□ -0.37
NEDD1-203ENST00000429527 FAM196AQ6ZSG2 479 aa12.74□□□□□ -0.37
NEDD1-203ENST00000429527 NUTM2GQ5VZR2 741 aa12.73□□□□□ -0.37
NEDD1-203ENST00000429527 COG3Q96JB2 828 aa12.73□□□□□ -0.37
NEDD1-203ENST00000429527 FLT4P35916 1363 aa12.73□□□□□ -0.37
NEDD1-203ENST00000429527 BTAF1O14981 1849 aa12.73□□□□□ -0.37
NEDD1-203ENST00000429527 FAM98CQ17RN3 349 aaKnown RBP12.73□□□□□ -0.37
NEDD1-203ENST00000429527 MYBBP1AQ9BQG0 1328 aaKnown RBP12.73□□□□□ -0.37
NEDD1-203ENST00000429527 DOT1LQ8TEK3 1739 aa12.73□□□□□ -0.37
NEDD1-203ENST00000429527 PDE3BQ13370 1112 aa12.72□□□□□ -0.37
NEDD1-203ENST00000429527 ZRANB1Q9UGI0 708 aa12.72□□□□□ -0.37
NEDD1-203ENST00000429527 HOXC9P31274 260 aa12.72□□□□□ -0.37
NEDD1-203ENST00000429527 MAP3K19Q56UN5 1328 aa12.72□□□□□ -0.37
NEDD1-203ENST00000429527 TOGARAM1Q9Y4F4 1720 aa12.72□□□□□ -0.37
NEDD1-203ENST00000429527 EVA1CP58658 441 aa12.71□□□□□ -0.37
NEDD1-203ENST00000429527 TMC1Q8TDI8 760 aa12.71□□□□□ -0.37
NEDD1-203ENST00000429527 BCL11AQ9H165 835 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms