RNA–Protein interactions for RNA: ENST00000428868.1

SMC6-204, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 4

Gene SMC6, Length 544 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-204ENST00000428868 HSP90AB2PQ58FF8 381 aa11.86□□□□□ -0.51
SMC6-204ENST00000428868 LMO7Q8WWI1 1683 aa11.86□□□□□ -0.51
SMC6-204ENST00000428868 FAM208AQ9UK61 1670 aaKnown RBP11.85□□□□□ -0.51
SMC6-204ENST00000428868 FLT4P35916 1363 aa11.85□□□□□ -0.51
SMC6-204ENST00000428868 U2SURPO15042 1029 aaKnown RBP11.85□□□□□ -0.51
SMC6-204ENST00000428868 DIAPH1O60610 1272 aaKnown RBP11.85□□□□□ -0.51
SMC6-204ENST00000428868 IL13P35225 146 aa11.85□□□□□ -0.51
SMC6-204ENST00000428868 CABLES1Q8TDN4 633 aa11.85□□□□□ -0.51
SMC6-204ENST00000428868 SALL2Q9Y467 1007 aaPredicted RBP11.85□□□□□ -0.51
SMC6-204ENST00000428868 ZBED9Q6R2W3 1325 aa11.85□□□□□ -0.51
SMC6-204ENST00000428868 EIF4A2Q14240 407 aaKnown RBP11.84□□□□□ -0.51
SMC6-204ENST00000428868 ZBTB7CA1YPR0 619 aa11.83□□□□□ -0.52
SMC6-204ENST00000428868 GCP02774 474 aa11.83□□□□□ -0.52
SMC6-204ENST00000428868 U2AF1L5P0DN76 240 aaPredicted RBP11.83□□□□□ -0.52
SMC6-204ENST00000428868 HOXC9P31274 260 aa11.83□□□□□ -0.52
SMC6-204ENST00000428868 U2AF1Q01081 240 aaKnown RBP eCLIP11.83□□□□□ -0.52
SMC6-204ENST00000428868 PLCH1Q4KWH8 1693 aa11.83□□□□□ -0.52
SMC6-204ENST00000428868 RTL1A6NKG5 1358 aa11.82□□□□□ -0.52
SMC6-204ENST00000428868 ARHGEF10O15013 1369 aa11.82□□□□□ -0.52
SMC6-204ENST00000428868 CENPBP07199 599 aaPredicted RBP11.82□□□□□ -0.52
SMC6-204ENST00000428868 AMPHP49418 695 aa11.82□□□□□ -0.52
SMC6-204ENST00000428868 APAF1O14727 1248 aa11.81□□□□□ -0.52
SMC6-204ENST00000428868 HMOX1P09601 288 aa11.81□□□□□ -0.52
SMC6-204ENST00000428868 AEBP1Q8IUX7 1158 aa11.81□□□□□ -0.52
SMC6-204ENST00000428868 PLEKHF1Q96S99 279 aa11.81□□□□□ -0.52
SMC6-204ENST00000428868 RSPH6AQ9H0K4 717 aa11.81□□□□□ -0.52
SMC6-204ENST00000428868 WNK3Q9BYP7 1800 aa11.81□□□□□ -0.52
SMC6-204ENST00000428868 KIF24Q5T7B8 1368 aa11.8□□□□□ -0.52
SMC6-204ENST00000428868 ZC3H6P61129 1189 aaKnown RBP11.8□□□□□ -0.52
SMC6-204ENST00000428868 ARHGEF25Q86VW2 580 aa11.8□□□□□ -0.52
SMC6-204ENST00000428868 KCNH5Q8NCM2 988 aa11.8□□□□□ -0.52
SMC6-204ENST00000428868 NUDCQ9Y266 331 aa11.8□□□□□ -0.52
SMC6-204ENST00000428868 RRP7AQ9Y3A4 280 aaKnown RBP11.8□□□□□ -0.52
SMC6-204ENST00000428868 ABCC6O95255 1503 aa11.8□□□□□ -0.52
SMC6-204ENST00000428868 NRAPQ86VF7 1730 aa11.8□□□□□ -0.52
SMC6-204ENST00000428868 IP6K1Q92551 441 aa11.79□□□□□ -0.52
SMC6-204ENST00000428868 RUNDC1Q96C34 613 aa11.79□□□□□ -0.52
SMC6-204ENST00000428868 LTV1Q96GA3 475 aaPredicted RBP11.79□□□□□ -0.52
SMC6-204ENST00000428868 COL14A1Q05707 1796 aaKnown RBP11.79□□□□□ -0.52
SMC6-204ENST00000428868 KIAA0232Q92628 1395 aa11.79□□□□□ -0.52
SMC6-204ENST00000428868 SHANK3Q9BYB0 1731 aa11.78□□□□□ -0.52
SMC6-204ENST00000428868 PRKAR2BP31323 418 aa11.78□□□□□ -0.52
SMC6-204ENST00000428868 AXIN2Q9Y2T1 843 aa11.78□□□□□ -0.52
SMC6-204ENST00000428868 ZNF521Q96K83 1311 aa11.78□□□□□ -0.52
SMC6-204ENST00000428868 CHRNA2Q15822 529 aa11.77□□□□□ -0.53
SMC6-204ENST00000428868 TCP11L2Q8N4U5 519 aa11.77□□□□□ -0.53
SMC6-204ENST00000428868 USHBP1Q8N6Y0 703 aa11.77□□□□□ -0.53
SMC6-204ENST00000428868 PHACTR3Q96KR7 559 aa11.77□□□□□ -0.53
SMC6-204ENST00000428868 EYA1Q99502 592 aa11.77□□□□□ -0.53
SMC6-204ENST00000428868 IGSF1Q8N6C5 1336 aa11.77□□□□□ -0.53
SMC6-204ENST00000428868 LRRC37A3O60309 1634 aa11.76□□□□□ -0.53
SMC6-204ENST00000428868 NEUROD2Q15784 382 aa11.76□□□□□ -0.53
SMC6-204ENST00000428868 LRRC59Q96AG4 307 aaKnown RBP11.76□□□□□ -0.53
SMC6-204ENST00000428868 CDCA7LQ96GN5 454 aa11.76□□□□□ -0.53
SMC6-204ENST00000428868 PKD1L3Q7Z443 1732 aa11.76□□□□□ -0.53
SMC6-204ENST00000428868 CPDO75976 1380 aa11.76□□□□□ -0.53
SMC6-204ENST00000428868 KDRP35968 1356 aa11.76□□□□□ -0.53
SMC6-204ENST00000428868 NCAPD2Q15021 1401 aa11.76□□□□□ -0.53
SMC6-204ENST00000428868 PARP4Q9UKK3 1724 aaKnown RBP11.75□□□□□ -0.53
SMC6-204ENST00000428868 SULT6B1Q6IMI4 303 aa11.75□□□□□ -0.53
SMC6-204ENST00000428868 RGS17Q9UGC6 210 aaPredicted RBP11.75□□□□□ -0.53
SMC6-204ENST00000428868 FCHSD2O94868 740 aa11.74□□□□□ -0.53
SMC6-204ENST00000428868 SPINK5Q9NQ38 1064 aaPredicted RBP11.74□□□□□ -0.53
SMC6-204ENST00000428868 NWD2Q9ULI1 1742 aa11.74□□□□□ -0.53
SMC6-204ENST00000428868 SIPA1L3O60292 1781 aaPredicted RBP11.74□□□□□ -0.53
SMC6-204ENST00000428868 SCN11AQ9UI33 1791 aa11.74□□□□□ -0.53
SMC6-204ENST00000428868 COL5A2P05997 1499 aaPredicted RBP11.73□□□□□ -0.53
SMC6-204ENST00000428868 TMPOP42166 694 aaKnown RBP11.73□□□□□ -0.53
SMC6-204ENST00000428868 NBPF6Q5VWK0 638 aa11.73□□□□□ -0.53
SMC6-204ENST00000428868 ANKRD24Q8TF21 1146 aa11.73□□□□□ -0.53
SMC6-204ENST00000428868 NBPF4Q96M43 638 aa11.73□□□□□ -0.53
SMC6-204ENST00000428868 MAPK8IP3Q9UPT6 1336 aa11.73□□□□□ -0.53
SMC6-204ENST00000428868 ERBB3P21860 1342 aa11.72□□□□□ -0.53
SMC6-204ENST00000428868 TRIM35Q9UPQ4 493 aa11.72□□□□□ -0.53
SMC6-204ENST00000428868 WWC1Q8IX03 1113 aa11.71□□□□□ -0.53
SMC6-204ENST00000428868 MEGF6O75095 1541 aa11.7□□□□□ -0.54
SMC6-204ENST00000428868 HAP1P54257 671 aaPredicted RBP11.7□□□□□ -0.54
SMC6-204ENST00000428868 NFE2L2Q16236 605 aa11.7□□□□□ -0.54
SMC6-204ENST00000428868 PRDM11Q9NQV5 511 aa11.7□□□□□ -0.54
SMC6-204ENST00000428868 ADAMTS7Q9UKP4 1686 aa11.7□□□□□ -0.54
SMC6-204ENST00000428868 LRP6O75581 1613 aa11.69□□□□□ -0.54
SMC6-204ENST00000428868 RIPK4P57078 832 aa11.69□□□□□ -0.54
SMC6-204ENST00000428868 THUMPD2Q9BTF0 503 aaKnown RBP11.69□□□□□ -0.54
SMC6-204ENST00000428868 KDM3BQ7LBC6 1761 aa11.69□□□□□ -0.54
SMC6-204ENST00000428868 FAM83GA6ND36 823 aa11.68□□□□□ -0.54
SMC6-204ENST00000428868 GOLGA2Q08379 1002 aa11.68□□□□□ -0.54
SMC6-204ENST00000428868 SLFN5Q08AF3 891 aa11.68□□□□□ -0.54
SMC6-204ENST00000428868 CCDC27Q2M243 656 aa11.68□□□□□ -0.54
SMC6-204ENST00000428868 MTHFSDQ2M296 383 aaKnown RBP11.68□□□□□ -0.54
SMC6-204ENST00000428868 POTEAQ6S8J7 498 aa11.68□□□□□ -0.54
SMC6-204ENST00000428868 TOGARAM1Q9Y4F4 1720 aa11.68□□□□□ -0.54
SMC6-204ENST00000428868 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.67□□□□□ -0.54
SMC6-204ENST00000428868 PDE3BQ13370 1112 aa11.67□□□□□ -0.54
SMC6-204ENST00000428868 DCTN1Q14203 1278 aa11.67□□□□□ -0.54
SMC6-204ENST00000428868 DUSP27Q5VZP5 1158 aa11.67□□□□□ -0.54
SMC6-204ENST00000428868 TRMT2AQ8IZ69 625 aaKnown RBP11.67□□□□□ -0.54
SMC6-204ENST00000428868 PNNQ9H307 717 aaKnown RBP11.67□□□□□ -0.54
SMC6-204ENST00000428868 ITGB4P16144 1822 aa11.66□□□□□ -0.54
SMC6-204ENST00000428868 NUTM2BA6NNL0 878 aaPredicted RBP11.65□□□□□ -0.54
SMC6-204ENST00000428868 NUTM2EB1AL46 878 aaPredicted RBP11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms