RNA–Protein interactions for RNA: ENST00000428680.6

CNOT4-206, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 4,642 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-206ENST00000428680 COG3Q96JB2 828 aa9.29□□□□□ -0.92
CNOT4-206ENST00000428680 EVC2Q86UK5 1308 aa9.29□□□□□ -0.92
CNOT4-206ENST00000428680 WASLO00401 505 aaPredicted RBP9.29□□□□□ -0.92
CNOT4-206ENST00000428680 TEFQ10587 303 aa9.29□□□□□ -0.92
CNOT4-206ENST00000428680 STK31Q9BXU1 1019 aa9.29□□□□□ -0.92
CNOT4-206ENST00000428680 RGPD3A6NKT7 1758 aaPredicted RBP9.29□□□□□ -0.92
CNOT4-206ENST00000428680 RGPD4Q7Z3J3 1758 aa9.29□□□□□ -0.92
CNOT4-206ENST00000428680 CLSTN1O94985 981 aa9.28□□□□□ -0.92
CNOT4-206ENST00000428680 KRT27Q7Z3Y8 459 aa9.28□□□□□ -0.92
CNOT4-206ENST00000428680 CCDC7Q96M83 1385 aa9.28□□□□□ -0.92
CNOT4-206ENST00000428680 CALD1Q05682 793 aaKnown RBP9.28□□□□□ -0.92
CNOT4-206ENST00000428680 HDAC5Q9UQL6 1122 aa9.27□□□□□ -0.92
CNOT4-206ENST00000428680 TRPM1Q7Z4N2 1603 aa9.27□□□□□ -0.93
CNOT4-206ENST00000428680 NAP1L2Q9ULW6 460 aaPredicted RBP9.27□□□□□ -0.93
CNOT4-206ENST00000428680 QRICH2Q9H0J4 1663 aa9.27□□□□□ -0.93
CNOT4-206ENST00000428680 PLEKHG3A1L390 1219 aa9.27□□□□□ -0.93
CNOT4-206ENST00000428680 SBNO2Q9Y2G9 1366 aa9.27□□□□□ -0.93
CNOT4-206ENST00000428680 TIMELESSQ9UNS1 1208 aa9.27□□□□□ -0.93
CNOT4-206ENST00000428680 POLR3AO14802 1390 aaPredicted RBP9.26□□□□□ -0.93
CNOT4-206ENST00000428680 CCDC61Q9Y6R9 512 aa9.26□□□□□ -0.93
CNOT4-206ENST00000428680 BCL9O00512 1426 aa9.26□□□□□ -0.93
CNOT4-206ENST00000428680 PRDM11Q9NQV5 511 aa9.26□□□□□ -0.93
CNOT4-206ENST00000428680 CASC1Q6TDU7 716 aa9.26□□□□□ -0.93
CNOT4-206ENST00000428680 PLCH1Q4KWH8 1693 aa9.25□□□□□ -0.93
CNOT4-206ENST00000428680 NSD3Q9BZ95 1437 aa9.25□□□□□ -0.93
CNOT4-206ENST00000428680 FRAT1Q92837 279 aaPredicted RBP9.25□□□□□ -0.93
CNOT4-206ENST00000428680 ADAMTS2O95450 1211 aa9.25□□□□□ -0.93
CNOT4-206ENST00000428680 SENP3-EIF4A1A0A087X0R7 540 aa9.24□□□□□ -0.93
CNOT4-206ENST00000428680 MS4A1P11836 297 aa9.24□□□□□ -0.93
CNOT4-206ENST00000428680 SIN3AQ96ST3 1273 aa9.24□□□□□ -0.93
CNOT4-206ENST00000428680 CENPJQ9HC77 1338 aaPredicted RBP9.24□□□□□ -0.93
CNOT4-206ENST00000428680 NLRP6P59044 892 aa9.24□□□□□ -0.93
CNOT4-206ENST00000428680 RAB3GAP2Q9H2M9 1393 aa9.24□□□□□ -0.93
CNOT4-206ENST00000428680 FBXW7Q969H0 707 aa9.24□□□□□ -0.93
CNOT4-206ENST00000428680 PRAM1Q96QH2 718 aa9.24□□□□□ -0.93
CNOT4-206ENST00000428680 ROCK2O75116 1388 aaKnown RBP9.23□□□□□ -0.93
CNOT4-206ENST00000428680 NUTM2GQ5VZR2 741 aa9.23□□□□□ -0.93
CNOT4-206ENST00000428680 ADGRF5Q8IZF2 1346 aa9.23□□□□□ -0.93
CNOT4-206ENST00000428680 TRIM34Q9BYJ4 488 aa9.23□□□□□ -0.93
CNOT4-206ENST00000428680 ADGRB1O14514 1584 aa9.23□□□□□ -0.93
CNOT4-206ENST00000428680 ALS2Q96Q42 1657 aa9.22□□□□□ -0.93
CNOT4-206ENST00000428680 CTDP1Q9Y5B0 961 aaPredicted RBP9.22□□□□□ -0.93
CNOT4-206ENST00000428680 ABCA3Q99758 1704 aa9.22□□□□□ -0.93
CNOT4-206ENST00000428680 KIF24Q5T7B8 1368 aa9.22□□□□□ -0.93
CNOT4-206ENST00000428680 SPATA31A5Q5VU36 1347 aa9.22□□□□□ -0.93
CNOT4-206ENST00000428680 SPATA31A7Q8IWB4 1347 aa9.22□□□□□ -0.93
CNOT4-206ENST00000428680 ZRSR1Q15695 479 aaKnown RBP9.22□□□□□ -0.93
CNOT4-206ENST00000428680 RBM33Q96EV2 1170 aaKnown RBP9.22□□□□□ -0.93
CNOT4-206ENST00000428680 CGNL1Q0VF96 1302 aa9.22□□□□□ -0.93
CNOT4-206ENST00000428680 BCL9LQ86UU0 1499 aa9.21□□□□□ -0.93
CNOT4-206ENST00000428680 FAM208AQ9UK61 1670 aaKnown RBP9.21□□□□□ -0.93
CNOT4-206ENST00000428680 TRPM3Q9HCF6 1732 aaPredicted RBP9.21□□□□□ -0.93
CNOT4-206ENST00000428680 TOM1L2Q6ZVM7 507 aa9.21□□□□□ -0.93
CNOT4-206ENST00000428680 NGEFQ8N5V2 710 aa9.21□□□□□ -0.93
CNOT4-206ENST00000428680 CCDC136Q96JN2 1154 aa9.21□□□□□ -0.93
CNOT4-206ENST00000428680 TOPAZ1Q8N9V7 1692 aa9.21□□□□□ -0.93
CNOT4-206ENST00000428680 SEPT12Q8IYM1 358 aa9.21□□□□□ -0.94
CNOT4-206ENST00000428680 AATKQ6ZMQ8 1374 aa9.21□□□□□ -0.94
CNOT4-206ENST00000428680 FOXO3O43524 673 aa9.2□□□□□ -0.94
CNOT4-206ENST00000428680 ABTB2Q8N961 1025 aa9.2□□□□□ -0.94
CNOT4-206ENST00000428680 NRAPQ86VF7 1730 aa9.2□□□□□ -0.94
CNOT4-206ENST00000428680 USP19O94966 1318 aa9.2□□□□□ -0.94
CNOT4-206ENST00000428680 TCP11L2Q8N4U5 519 aa9.2□□□□□ -0.94
CNOT4-206ENST00000428680 OVOS2A0A0G2JMS6 1433 aa9.2□□□□□ -0.94
CNOT4-206ENST00000428680 OVOS2A0A0J9YW53 1432 aa9.2□□□□□ -0.94
CNOT4-206ENST00000428680 OVOS2Q6IE36 1432 aa9.2□□□□□ -0.94
CNOT4-206ENST00000428680 LMOD3Q0VAK6 560 aa9.2□□□□□ -0.94
CNOT4-206ENST00000428680 KRI1Q8N9T8 703 aaKnown RBP9.2□□□□□ -0.94
CNOT4-206ENST00000428680 ORAI2Q96SN7 254 aa9.2□□□□□ -0.94
CNOT4-206ENST00000428680 ANP32BQ92688 251 aaKnown RBP9.2□□□□□ -0.94
CNOT4-206ENST00000428680 NOL10Q9BSC4 688 aaKnown RBP9.2□□□□□ -0.94
CNOT4-206ENST00000428680 THSD7AQ9UPZ6 1657 aa9.2□□□□□ -0.94
CNOT4-206ENST00000428680 NUDT16Q96DE0 195 aaKnown RBP9.19□□□□□ -0.94
CNOT4-206ENST00000428680 ARHGEF28Q8N1W1 1705 aaKnown RBP9.19□□□□□ -0.94
CNOT4-206ENST00000428680 PAXIP1Q6ZW49 1069 aaPredicted RBP9.19□□□□□ -0.94
CNOT4-206ENST00000428680 CCAR1Q8IX12 1150 aaKnown RBP9.19□□□□□ -0.94
CNOT4-206ENST00000428680 CRB1P82279 1406 aa9.19□□□□□ -0.94
CNOT4-206ENST00000428680 SMG6Q86US8 1419 aaKnown RBP9.19□□□□□ -0.94
CNOT4-206ENST00000428680 ANP32AP39687 249 aaKnown RBP9.18□□□□□ -0.94
CNOT4-206ENST00000428680 VPS37DQ86XT2 251 aa9.18□□□□□ -0.94
CNOT4-206ENST00000428680 FLAD1Q8NFF5 587 aa9.18□□□□□ -0.94
CNOT4-206ENST00000428680 RTL1A6NKG5 1358 aa9.18□□□□□ -0.94
CNOT4-206ENST00000428680 PHRF1Q9P1Y6 1649 aaKnown RBP9.18□□□□□ -0.94
CNOT4-206ENST00000428680 EIF5BO60841 1220 aaKnown RBP9.17□□□□□ -0.94
CNOT4-206ENST00000428680 USP54Q70EL1 1684 aa9.17□□□□□ -0.94
CNOT4-206ENST00000428680 SLIT3O75094 1523 aa9.17□□□□□ -0.94
CNOT4-206ENST00000428680 SSH2Q76I76 1423 aa9.17□□□□□ -0.94
CNOT4-206ENST00000428680 NEXNQ0ZGT2 675 aa9.17□□□□□ -0.94
CNOT4-206ENST00000428680 SLC16A10Q8TF71 515 aa9.17□□□□□ -0.94
CNOT4-206ENST00000428680 DDRGK1Q96HY6 314 aa9.17□□□□□ -0.94
CNOT4-206ENST00000428680 RBM42Q9BTD8 480 aaKnown RBP9.17□□□□□ -0.94
CNOT4-206ENST00000428680 GLI3P10071 1580 aa9.17□□□□□ -0.94
CNOT4-206ENST00000428680 SPATA31A1Q5TZJ5 1347 aa9.17□□□□□ -0.94
CNOT4-206ENST00000428680 PMFBP1Q8TBY8 1022 aa9.16□□□□□ -0.94
CNOT4-206ENST00000428680 PARP4Q9UKK3 1724 aaKnown RBP9.16□□□□□ -0.94
CNOT4-206ENST00000428680 DDX54Q8TDD1 881 aaKnown RBP9.16□□□□□ -0.94
CNOT4-206ENST00000428680 USP31Q70CQ4 1352 aa9.16□□□□□ -0.94
CNOT4-206ENST00000428680 IPO8O15397 1037 aaKnown RBP9.16□□□□□ -0.94
CNOT4-206ENST00000428680 CFAP70Q5T0N1 1121 aa9.16□□□□□ -0.94
CNOT4-206ENST00000428680 STK32BQ9NY57 414 aa9.16□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms