RNA–Protein interactions for RNA: ENST00000428599.6

CTNND1-208, Transcript of catenin delta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNND1, Length 6,016 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-208ENST00000428599 TTC39AQ5SRH9 613 aa10.68□□□□□ -0.7
CTNND1-208ENST00000428599 HIP1O00291 1037 aa10.67□□□□□ -0.7
CTNND1-208ENST00000428599 ABCC5O15440 1437 aa10.67□□□□□ -0.7
CTNND1-208ENST00000428599 DESP17661 470 aa10.67□□□□□ -0.7
CTNND1-208ENST00000428599 RBM5P52756 815 aaKnown RBP eCLIP10.67□□□□□ -0.7
CTNND1-208ENST00000428599 XPCQ01831 940 aaPredicted RBP10.67□□□□□ -0.7
CTNND1-208ENST00000428599 TOM1L2Q6ZVM7 507 aa10.67□□□□□ -0.7
CTNND1-208ENST00000428599 FANCAO15360 1455 aa10.67□□□□□ -0.7
CTNND1-208ENST00000428599 CCDC158Q5M9N0 1113 aa10.67□□□□□ -0.7
CTNND1-208ENST00000428599 DDX24Q9GZR7 859 aaKnown RBP eCLIP10.67□□□□□ -0.71e-7■■■□□ 16.3
CTNND1-208ENST00000428599 DNAJC2Q99543 621 aaKnown RBP10.67□□□□□ -0.7
CTNND1-208ENST00000428599 CCDC30Q5VVM6 783 aa10.67□□□□□ -0.7
CTNND1-208ENST00000428599 MAP7D2Q96T17 732 aa10.67□□□□□ -0.7
CTNND1-208ENST00000428599 KDM4AO75164 1064 aa10.66□□□□□ -0.7
CTNND1-208ENST00000428599 ERLIN2O94905 339 aa10.66□□□□□ -0.7
CTNND1-208ENST00000428599 CLASRPQ8N2M8 674 aaKnown RBP10.66□□□□□ -0.7
CTNND1-208ENST00000428599 DENND4BO75064 1496 aaPredicted RBP10.66□□□□□ -0.7
CTNND1-208ENST00000428599 WDHD1O75717 1129 aaPredicted RBP10.66□□□□□ -0.7
CTNND1-208ENST00000428599 NEBLO76041 1014 aa10.66□□□□□ -0.7
CTNND1-208ENST00000428599 NEFHP12036 1026 aa10.66□□□□□ -0.7
CTNND1-208ENST00000428599 TRIM21P19474 475 aaKnown RBP10.66□□□□□ -0.7
CTNND1-208ENST00000428599 PDE4AP27815 886 aa10.66□□□□□ -0.7
CTNND1-208ENST00000428599 SULT6B1Q6IMI4 303 aa10.66□□□□□ -0.7
CTNND1-208ENST00000428599 ATAD2Q6PL18 1390 aa10.66□□□□□ -0.7
CTNND1-208ENST00000428599 ERC1Q8IUD2 1116 aa10.65□□□□□ -0.7
CTNND1-208ENST00000428599 CEBPAP49715 358 aaPredicted RBP10.65□□□□□ -0.7
CTNND1-208ENST00000428599 NACAP1Q9BZK3 213 aa10.65□□□□□ -0.7
CTNND1-208ENST00000428599 GNAI3P08754 354 aa10.65□□□□□ -0.7
CTNND1-208ENST00000428599 FBXO31Q5XUX0 539 aaPredicted RBP10.65□□□□□ -0.7
CTNND1-208ENST00000428599 SOGA3Q5TF21 947 aa10.65□□□□□ -0.71
CTNND1-208ENST00000428599 PRDM11Q9NQV5 511 aa10.65□□□□□ -0.71
CTNND1-208ENST00000428599 ATP2B1P20020 1258 aa10.64□□□□□ -0.71
CTNND1-208ENST00000428599 TTLL5Q6EMB2 1281 aa10.64□□□□□ -0.71
CTNND1-208ENST00000428599 RSPH6AQ9H0K4 717 aa10.64□□□□□ -0.71
CTNND1-208ENST00000428599 LUC7LQ9NQ29 371 aaKnown RBP10.64□□□□□ -0.71
CTNND1-208ENST00000428599 CDC45O75419 566 aa10.64□□□□□ -0.71
CTNND1-208ENST00000428599 DDX54Q8TDD1 881 aaKnown RBP10.64□□□□□ -0.71
CTNND1-208ENST00000428599 CCP110O43303 1012 aa10.64□□□□□ -0.71
CTNND1-208ENST00000428599 SEPT7Q16181 437 aaKnown RBP10.64□□□□□ -0.71
CTNND1-208ENST00000428599 TXLNBQ8N3L3 684 aa10.64□□□□□ -0.71
CTNND1-208ENST00000428599 NUDT16Q96DE0 195 aaKnown RBP10.64□□□□□ -0.71
CTNND1-208ENST00000428599 WAPLQ7Z5K2 1190 aa10.64□□□□□ -0.71
CTNND1-208ENST00000428599 CCDC97Q96F63 343 aaPredicted RBP10.64□□□□□ -0.71
CTNND1-208ENST00000428599 ZNF396Q96N95 335 aaPredicted RBP10.64□□□□□ -0.71
CTNND1-208ENST00000428599 DNAI2Q9GZS0 605 aa10.64□□□□□ -0.71
CTNND1-208ENST00000428599 ZNHIT6Q9NWK9 470 aaKnown RBP10.64□□□□□ -0.71
CTNND1-208ENST00000428599 RRS1Q15050 365 aaKnown RBP10.63□□□□□ -0.71
CTNND1-208ENST00000428599 AKNAQ7Z591 1439 aa10.63□□□□□ -0.71
CTNND1-208ENST00000428599 LETM1O95202 739 aaPredicted RBP10.63□□□□□ -0.71
CTNND1-208ENST00000428599 AAMPQ13685 434 aa10.63□□□□□ -0.71
CTNND1-208ENST00000428599 ANKRD62A6NC57 917 aa10.63□□□□□ -0.71
CTNND1-208ENST00000428599 STIM1Q13586 685 aa10.63□□□□□ -0.71
CTNND1-208ENST00000428599 PANK1Q8TE04 598 aa10.63□□□□□ -0.71
CTNND1-208ENST00000428599 KINO60870 393 aaKnown RBP10.63□□□□□ -0.71
CTNND1-208ENST00000428599 CABP4P57796 275 aa10.62□□□□□ -0.71
CTNND1-208ENST00000428599 ZNF530Q6P9A1 599 aaPredicted RBP10.62□□□□□ -0.71
CTNND1-208ENST00000428599 ZHX3Q9H4I2 956 aa10.62□□□□□ -0.71
CTNND1-208ENST00000428599 SKIDA1Q1XH10 827 aa10.62□□□□□ -0.71
CTNND1-208ENST00000428599 VSIG10Q8N0Z9 540 aa10.62□□□□□ -0.71
CTNND1-208ENST00000428599 CCDC61Q9Y6R9 512 aa10.62□□□□□ -0.71
CTNND1-208ENST00000428599 MATR3P43243 847 aaKnown RBP eCLIP10.62□□□□□ -0.716e-7■■■■□ 22.1
CTNND1-208ENST00000428599 GSE1Q14687 1217 aa10.62□□□□□ -0.71
CTNND1-208ENST00000428599 TRIM22Q8IYM9 498 aa10.62□□□□□ -0.71
CTNND1-208ENST00000428599 JMYQ8N9B5 988 aa10.62□□□□□ -0.71
CTNND1-208ENST00000428599 H0YHG0 523 aa10.61□□□□□ -0.71
CTNND1-208ENST00000428599 SURF6O75683 361 aaKnown RBP10.61□□□□□ -0.71
CTNND1-208ENST00000428599 SMC2O95347 1197 aa10.61□□□□□ -0.71
CTNND1-208ENST00000428599 ZSCAN25Q6NSZ9 544 aa10.61□□□□□ -0.71
CTNND1-208ENST00000428599 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.61□□□□□ -0.71
CTNND1-208ENST00000428599 ZSCAN29Q8IWY8 852 aaPredicted RBP10.61□□□□□ -0.71
CTNND1-208ENST00000428599 SPG7Q9UQ90 795 aa10.61□□□□□ -0.71
CTNND1-208ENST00000428599 THOC2Q8NI27 1593 aaKnown RBP10.61□□□□□ -0.71
CTNND1-208ENST00000428599 ZC3H6P61129 1189 aaKnown RBP10.61□□□□□ -0.71
CTNND1-208ENST00000428599 LNPKQ9C0E8 428 aa10.61□□□□□ -0.71
CTNND1-208ENST00000428599 MAP3K1Q13233 1512 aa10.61□□□□□ -0.71
CTNND1-208ENST00000428599 FAM135AQ9P2D6 1515 aa10.61□□□□□ -0.71
CTNND1-208ENST00000428599 PDCP20941 246 aa10.61□□□□□ -0.71
CTNND1-208ENST00000428599 EXOSC9Q06265 439 aaKnown RBP10.61□□□□□ -0.71
CTNND1-208ENST00000428599 TMOD2Q9NZR1 351 aa10.61□□□□□ -0.71
CTNND1-208ENST00000428599 CCDC69A6NI79 296 aa10.61□□□□□ -0.71
CTNND1-208ENST00000428599 BRPF1P55201 1214 aaPredicted RBP10.61□□□□□ -0.71
CTNND1-208ENST00000428599 TWISTNBQ3B726 338 aaPredicted RBP10.61□□□□□ -0.71
CTNND1-208ENST00000428599 EZRP15311 586 aaKnown RBP10.6□□□□□ -0.71
CTNND1-208ENST00000428599 IDI1Q13907 227 aa10.6□□□□□ -0.71
CTNND1-208ENST00000428599 CDCA7LQ96GN5 454 aa10.6□□□□□ -0.71
CTNND1-208ENST00000428599 MPHOSPH8Q99549 860 aa10.6□□□□□ -0.71
CTNND1-208ENST00000428599 DACH1Q9UI36 760 aa10.6□□□□□ -0.71
CTNND1-208ENST00000428599 STK38Q15208 465 aa10.6□□□□□ -0.71
CTNND1-208ENST00000428599 RAPGEF6Q8TEU7 1601 aa10.6□□□□□ -0.71
CTNND1-208ENST00000428599 PPM1FP49593 454 aaPredicted RBP10.6□□□□□ -0.71
CTNND1-208ENST00000428599 TANGO6Q9C0B7 1094 aa10.6□□□□□ -0.71
CTNND1-208ENST00000428599 CCDC57Q2TAC2 916 aa10.6□□□□□ -0.71
CTNND1-208ENST00000428599 NSD3Q9BZ95 1437 aa10.6□□□□□ -0.71
CTNND1-208ENST00000428599 BMP2KQ9NSY1 1161 aaPredicted RBP10.6□□□□□ -0.71
CTNND1-208ENST00000428599 NCOA1Q15788 1441 aa10.6□□□□□ -0.71
CTNND1-208ENST00000428599 ZNF76P36508 570 aa10.59□□□□□ -0.71
CTNND1-208ENST00000428599 DEF6Q9H4E7 631 aa10.59□□□□□ -0.71
CTNND1-208ENST00000428599 TSR2Q969E8 191 aaKnown RBP10.59□□□□□ -0.71
CTNND1-208ENST00000428599 CWC15Q9P013 229 aaKnown RBP10.59□□□□□ -0.71
CTNND1-208ENST00000428599 NOL7Q9UMY1 257 aaKnown RBP10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms