RNA–Protein interactions for RNA: ENST00000427862.1

GCFC2-203, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 3

Gene GCFC2, Length 632 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-203ENST00000427862 ZNF697Q5TEC3 545 aa9.46□□□□□ -0.9
GCFC2-203ENST00000427862 GRM5P41594 1212 aa9.45□□□□□ -0.9
GCFC2-203ENST00000427862 MPNDQ8N594 471 aa9.45□□□□□ -0.9
GCFC2-203ENST00000427862 SLC10A4Q96EP9 437 aa9.45□□□□□ -0.9
GCFC2-203ENST00000427862 CCDC85AQ96PX6 553 aaPredicted RBP9.45□□□□□ -0.9
GCFC2-203ENST00000427862 ATP9BO43861 1147 aa9.44□□□□□ -0.9
GCFC2-203ENST00000427862 RFX1P22670 979 aa9.44□□□□□ -0.9
GCFC2-203ENST00000427862 NFATC2IPQ8NCF5 419 aa9.44□□□□□ -0.9
GCFC2-203ENST00000427862 KCTD15Q96SI1 283 aaPredicted RBP9.44□□□□□ -0.9
GCFC2-203ENST00000427862 MAP4K5Q9Y4K4 846 aa9.44□□□□□ -0.9
GCFC2-203ENST00000427862 MAFBQ9Y5Q3 323 aaPredicted RBP9.44□□□□□ -0.9
GCFC2-203ENST00000427862 TLL2Q9Y6L7 1015 aa9.44□□□□□ -0.9
GCFC2-203ENST00000427862 GDF9O60383 454 aa9.43□□□□□ -0.9
GCFC2-203ENST00000427862 SKIP12755 728 aa9.43□□□□□ -0.9
GCFC2-203ENST00000427862 LMOD1P29536 600 aaPredicted RBP9.43□□□□□ -0.9
GCFC2-203ENST00000427862 FOXC1Q12948 553 aa9.43□□□□□ -0.9
GCFC2-203ENST00000427862 SLFNL1Q499Z3 407 aa9.43□□□□□ -0.9
GCFC2-203ENST00000427862 RNF135Q8IUD6 432 aa9.43□□□□□ -0.9
GCFC2-203ENST00000427862 ZNF592Q92610 1267 aa9.43□□□□□ -0.9
GCFC2-203ENST00000427862 ARID5BQ14865 1188 aa9.42□□□□□ -0.9
GCFC2-203ENST00000427862 TRAF7Q6Q0C0 670 aa9.42□□□□□ -0.9
GCFC2-203ENST00000427862 TRIM67Q6ZTA4 783 aa9.42□□□□□ -0.9
GCFC2-203ENST00000427862 VASH1Q7L8A9 365 aaPredicted RBP9.42□□□□□ -0.9
GCFC2-203ENST00000427862 CDV3Q9UKY7 258 aaKnown RBP9.42□□□□□ -0.9
GCFC2-203ENST00000427862 INTS6LQ5JSJ4 861 aaKnown RBP9.41□□□□□ -0.9
GCFC2-203ENST00000427862 PLPP7Q8NBV4 271 aa9.41□□□□□ -0.9
GCFC2-203ENST00000427862 CDCA7Q9BWT1 371 aaPredicted RBP9.41□□□□□ -0.9
GCFC2-203ENST00000427862 NBPF20Q3BBV1 942 aa9.4□□□□□ -0.9
GCFC2-203ENST00000427862 KANK4Q5T7N3 995 aaPredicted RBP9.4□□□□□ -0.9
GCFC2-203ENST00000427862 DEPDC4Q8N2C3 294 aa9.4□□□□□ -0.9
GCFC2-203ENST00000427862 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP9.39□□□□□ -0.91
GCFC2-203ENST00000427862 USP17L5A8MUK1 530 aa9.39□□□□□ -0.91
GCFC2-203ENST00000427862 Q6ZNB5 142 aa9.39□□□□□ -0.91
GCFC2-203ENST00000427862 ERVH48-1M5A8F1 160 aa9.38□□□□□ -0.91
GCFC2-203ENST00000427862 CDCA8Q53HL2 280 aa9.38□□□□□ -0.91
GCFC2-203ENST00000427862 PLEKHM2Q8IWE5 1019 aa9.38□□□□□ -0.91
GCFC2-203ENST00000427862 SEPT12Q8IYM1 358 aa9.38□□□□□ -0.91
GCFC2-203ENST00000427862 USP17L3A6NCW0 530 aa9.37□□□□□ -0.91
GCFC2-203ENST00000427862 USP17L4A6NCW7 530 aa9.37□□□□□ -0.91
GCFC2-203ENST00000427862 TNFRSF10AO00220 468 aa9.37□□□□□ -0.91
GCFC2-203ENST00000427862 ADH1CP00326 375 aa9.37□□□□□ -0.91
GCFC2-203ENST00000427862 NR3C2P08235 984 aa9.37□□□□□ -0.91
GCFC2-203ENST00000427862 RAB15P59190 212 aa9.37□□□□□ -0.91
GCFC2-203ENST00000427862 MAP7D1Q3KQU3 841 aa9.37□□□□□ -0.91
GCFC2-203ENST00000427862 RNF20Q5VTR2 975 aa9.37□□□□□ -0.91
GCFC2-203ENST00000427862 USP17L2Q6R6M4 530 aa9.37□□□□□ -0.91
GCFC2-203ENST00000427862 USP17L1Q7RTZ2 530 aa9.37□□□□□ -0.91
GCFC2-203ENST00000427862 SNIP1Q8TAD8 396 aaKnown RBP9.37□□□□□ -0.91
GCFC2-203ENST00000427862 TOR4AQ9NXH8 423 aa9.37□□□□□ -0.91
GCFC2-203ENST00000427862 J3QL48 77 aa9.36□□□□□ -0.91
GCFC2-203ENST00000427862 ALDH1A1P00352 501 aa9.36□□□□□ -0.91
GCFC2-203ENST00000427862 FSHRP23945 695 aa9.36□□□□□ -0.91
GCFC2-203ENST00000427862 NCOA4Q13772 614 aa9.36□□□□□ -0.91
GCFC2-203ENST00000427862 TMPRSS4Q9NRS4 437 aa9.36□□□□□ -0.91
GCFC2-203ENST00000427862 NR5A1Q13285 461 aa9.35□□□□□ -0.91
GCFC2-203ENST00000427862 PBXIP1Q96AQ6 731 aa9.35□□□□□ -0.91
GCFC2-203ENST00000427862 DOLKQ9UPQ8 538 aa9.35□□□□□ -0.91
GCFC2-203ENST00000427862 PCDHB11Q9Y5F2 797 aa9.35□□□□□ -0.91
GCFC2-203ENST00000427862 LZTS3O60299 673 aaPredicted RBP9.34□□□□□ -0.91
GCFC2-203ENST00000427862 PRR20EP86478 221 aa9.34□□□□□ -0.91
GCFC2-203ENST00000427862 PRR20CP86479 221 aa9.34□□□□□ -0.91
GCFC2-203ENST00000427862 PRR20DP86480 221 aa9.34□□□□□ -0.91
GCFC2-203ENST00000427862 PRR20BP86481 221 aa9.34□□□□□ -0.91
GCFC2-203ENST00000427862 PRR20AP86496 221 aa9.34□□□□□ -0.91
GCFC2-203ENST00000427862 ARXQ96QS3 562 aa9.34□□□□□ -0.91
GCFC2-203ENST00000427862 MKRN1Q9UHC7 482 aaKnown RBP9.34□□□□□ -0.91
GCFC2-203ENST00000427862 PPP1R15AO75807 674 aaPredicted RBP9.33□□□□□ -0.92
GCFC2-203ENST00000427862 SMPD1P17405 629 aa9.33□□□□□ -0.92
GCFC2-203ENST00000427862 SCTRP47872 440 aa9.33□□□□□ -0.92
GCFC2-203ENST00000427862 OXLD1Q5BKU9 147 aa9.33□□□□□ -0.92
GCFC2-203ENST00000427862 CCDC125Q86Z20 511 aa9.33□□□□□ -0.92
GCFC2-203ENST00000427862 VRTNQ9H8Y1 702 aa9.33□□□□□ -0.92
GCFC2-203ENST00000427862 PPP1R26Q5T8A7 1209 aaPredicted RBP9.32□□□□□ -0.92
GCFC2-203ENST00000427862 CYP4X1Q8N118 509 aa9.32□□□□□ -0.92
GCFC2-203ENST00000427862 KLF16Q9BXK1 252 aaPredicted RBP9.32□□□□□ -0.92
GCFC2-203ENST00000427862 TTC24A2A3L6 582 aaPredicted RBP9.31□□□□□ -0.92
GCFC2-203ENST00000427862 ZBTB7BO15156 539 aaPredicted RBP9.31□□□□□ -0.92
GCFC2-203ENST00000427862 LILRA1O75019 489 aa9.31□□□□□ -0.92
GCFC2-203ENST00000427862 NNTQ13423 1086 aa9.31□□□□□ -0.92
GCFC2-203ENST00000427862 EML3Q32P44 896 aa9.31□□□□□ -0.92
GCFC2-203ENST00000427862 CCDC116Q8IYX3 515 aa9.31□□□□□ -0.92
GCFC2-203ENST00000427862 PCDHGA11Q9Y5H2 935 aa9.31□□□□□ -0.92
GCFC2-203ENST00000427862 ADD1P35611 737 aaKnown RBP9.3□□□□□ -0.92
GCFC2-203ENST00000427862 ERVK-9P63128 1117 aa9.3□□□□□ -0.92
GCFC2-203ENST00000427862 CLDN10P78369 228 aa9.3□□□□□ -0.92
GCFC2-203ENST00000427862 ZNF784Q8NCA9 323 aaPredicted RBP9.3□□□□□ -0.92
GCFC2-203ENST00000427862 WASF2Q9Y6W5 498 aa9.3□□□□□ -0.92
GCFC2-203ENST00000427862 ATG7O95352 703 aa9.29□□□□□ -0.92
GCFC2-203ENST00000427862 DHX9Q08211 1270 aaKnown RBP9.29□□□□□ -0.92
GCFC2-203ENST00000427862 USP4Q13107 963 aa9.29□□□□□ -0.92
GCFC2-203ENST00000427862 CRTC2Q53ET0 693 aaPredicted RBP9.29□□□□□ -0.92
GCFC2-203ENST00000427862 DKK1O94907 266 aa9.28□□□□□ -0.92
GCFC2-203ENST00000427862 HOMEZQ8IX15 550 aa9.28□□□□□ -0.92
GCFC2-203ENST00000427862 OSBPL3Q9H4L5 887 aa9.28□□□□□ -0.92
GCFC2-203ENST00000427862 CYLDQ9NQC7 956 aa9.28□□□□□ -0.92
GCFC2-203ENST00000427862 KIAA1024Q9UPX6 916 aa9.28□□□□□ -0.92
GCFC2-203ENST00000427862 NOD1Q9Y239 953 aa9.28□□□□□ -0.92
GCFC2-203ENST00000427862 ATP5J2-PTCD1G3V325 749 aa9.27□□□□□ -0.93
GCFC2-203ENST00000427862 PTK7Q13308 1070 aa9.27□□□□□ -0.93
GCFC2-203ENST00000427862 CC2D2BQ6DHV5 1058 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms