RNA–Protein interactions for RNA: ENST00000427778.1

LINC00963-204, long intergenic non-protein coding RNA 963, humanhuman

TSL 2

Gene LINC00963, Length 382 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-204ENST00000427778 USP54Q70EL1 1684 aa12.51□□□□□ -0.41
LINC00963-204ENST00000427778 THSD7AQ9UPZ6 1657 aa12.51□□□□□ -0.41
LINC00963-204ENST00000427778 SLC24A1O60721 1099 aa12.5□□□□□ -0.41
LINC00963-204ENST00000427778 R3HDM1Q15032 1099 aaKnown RBP12.5□□□□□ -0.41
LINC00963-204ENST00000427778 CPSF1Q10570 1443 aaKnown RBP12.5□□□□□ -0.41
LINC00963-204ENST00000427778 USP19O94966 1318 aa12.49□□□□□ -0.41
LINC00963-204ENST00000427778 VPS72Q15906 364 aa12.49□□□□□ -0.41
LINC00963-204ENST00000427778 LMOD2Q6P5Q4 547 aa12.49□□□□□ -0.41
LINC00963-204ENST00000427778 CABLES1Q8TDN4 633 aa12.49□□□□□ -0.41
LINC00963-204ENST00000427778 TESK2Q96S53 571 aa12.49□□□□□ -0.41
LINC00963-204ENST00000427778 PLSCR2Q9NRY7 297 aa12.49□□□□□ -0.41
LINC00963-204ENST00000427778 CCDC9Q9Y3X0 531 aaKnown RBP12.49□□□□□ -0.41
LINC00963-204ENST00000427778 CHD4Q14839 1912 aa12.49□□□□□ -0.41
LINC00963-204ENST00000427778 SLIT3O75094 1523 aa12.48□□□□□ -0.41
LINC00963-204ENST00000427778 USP47Q96K76 1375 aa12.48□□□□□ -0.41
LINC00963-204ENST00000427778 A0A0G2JS52 829 aa12.48□□□□□ -0.41
LINC00963-204ENST00000427778 CD44P16070 742 aaKnown RBP12.48□□□□□ -0.41
LINC00963-204ENST00000427778 MYT1Q01538 1121 aa12.48□□□□□ -0.41
LINC00963-204ENST00000427778 CABP1Q9NZU7 370 aa12.48□□□□□ -0.41
LINC00963-204ENST00000427778 CD163L1Q9NR16 1453 aa12.47□□□□□ -0.41
LINC00963-204ENST00000427778 NINLQ9Y2I6 1382 aa12.47□□□□□ -0.41
LINC00963-204ENST00000427778 PAK3O75914 559 aaPredicted RBP12.47□□□□□ -0.41
LINC00963-204ENST00000427778 HAP1P54257 671 aaPredicted RBP12.47□□□□□ -0.41
LINC00963-204ENST00000427778 EN1Q05925 392 aaPredicted RBP12.47□□□□□ -0.41
LINC00963-204ENST00000427778 LMO7Q8WWI1 1683 aa12.47□□□□□ -0.41
LINC00963-204ENST00000427778 CPDO75976 1380 aa12.46□□□□□ -0.41
LINC00963-204ENST00000427778 ST20-MTHFSA0A0A6YYL1 179 aa12.46□□□□□ -0.41
LINC00963-204ENST00000427778 ONECUT3O60422 494 aaPredicted RBP12.46□□□□□ -0.41
LINC00963-204ENST00000427778 CCER1Q8TC90 406 aaPredicted RBP12.46□□□□□ -0.41
LINC00963-204ENST00000427778 TTC21AQ8NDW8 1320 aa12.44□□□□□ -0.42
LINC00963-204ENST00000427778 FAM83GA6ND36 823 aa12.44□□□□□ -0.42
LINC00963-204ENST00000427778 ABTB2Q8N961 1025 aa12.44□□□□□ -0.42
LINC00963-204ENST00000427778 KIAA0232Q92628 1395 aa12.43□□□□□ -0.42
LINC00963-204ENST00000427778 NLRP13Q86W25 1043 aa12.43□□□□□ -0.42
LINC00963-204ENST00000427778 KTN1Q86UP2 1357 aaKnown RBP12.43□□□□□ -0.42
LINC00963-204ENST00000427778 MYOM1P52179 1685 aa12.42□□□□□ -0.42
LINC00963-204ENST00000427778 PRDM11Q9NQV5 511 aa12.42□□□□□ -0.42
LINC00963-204ENST00000427778 COL18A1P39060 1754 aa12.42□□□□□ -0.42
LINC00963-204ENST00000427778 EDC4Q6P2E9 1401 aaKnown RBP12.42□□□□□ -0.42
LINC00963-204ENST00000427778 NFAT5O94916 1531 aa12.42□□□□□ -0.42
LINC00963-204ENST00000427778 ABCC6O95255 1503 aa12.42□□□□□ -0.42
LINC00963-204ENST00000427778 TTC21BQ7Z4L5 1316 aa12.41□□□□□ -0.42
LINC00963-204ENST00000427778 RGPD3A6NKT7 1758 aaPredicted RBP12.41□□□□□ -0.42
LINC00963-204ENST00000427778 RGPD4Q7Z3J3 1758 aa12.41□□□□□ -0.42
LINC00963-204ENST00000427778 EZH2Q15910 746 aaKnown RBP12.41□□□□□ -0.42
LINC00963-204ENST00000427778 FAM98CQ17RN3 349 aaKnown RBP12.41□□□□□ -0.42
LINC00963-204ENST00000427778 USP31Q70CQ4 1352 aa12.41□□□□□ -0.42
LINC00963-204ENST00000427778 PARD3Q8TEW0 1356 aa12.41□□□□□ -0.42
LINC00963-204ENST00000427778 NUTM2GQ5VZR2 741 aa12.4□□□□□ -0.42
LINC00963-204ENST00000427778 BTG4Q9NY30 223 aa12.4□□□□□ -0.42
LINC00963-204ENST00000427778 CASZ1Q86V15 1759 aa12.4□□□□□ -0.42
LINC00963-204ENST00000427778 A0A1W2PP64 1363 aa12.4□□□□□ -0.42
LINC00963-204ENST00000427778 PLEKHG5O94827 1062 aa12.39□□□□□ -0.43
LINC00963-204ENST00000427778 GCP02774 474 aa12.39□□□□□ -0.43
LINC00963-204ENST00000427778 POTEIP0CG38 1075 aa12.39□□□□□ -0.43
LINC00963-204ENST00000427778 CLCN6P51797 869 aa12.39□□□□□ -0.43
LINC00963-204ENST00000427778 TMF1P82094 1093 aa12.39□□□□□ -0.43
LINC00963-204ENST00000427778 FAM182BQ5T319 152 aa12.39□□□□□ -0.43
LINC00963-204ENST00000427778 DCBLD2Q96PD2 775 aa12.39□□□□□ -0.43
LINC00963-204ENST00000427778 TERF2IPQ9NYB0 399 aa12.39□□□□□ -0.43
LINC00963-204ENST00000427778 NLRP6P59044 892 aa12.38□□□□□ -0.43
LINC00963-204ENST00000427778 CDCA8Q53HL2 280 aa12.38□□□□□ -0.43
LINC00963-204ENST00000427778 IFFO2Q5TF58 517 aa12.38□□□□□ -0.43
LINC00963-204ENST00000427778 HDGFL2Q7Z4V5 671 aaPredicted RBP12.38□□□□□ -0.43
LINC00963-204ENST00000427778 SLC12A5Q9H2X9 1139 aa12.38□□□□□ -0.43
LINC00963-204ENST00000427778 FARP1Q9Y4F1 1045 aaPredicted RBP12.38□□□□□ -0.43
LINC00963-204ENST00000427778 AATKQ6ZMQ8 1374 aa12.38□□□□□ -0.43
LINC00963-204ENST00000427778 ANKRD36BQ8N2N9 1353 aa12.38□□□□□ -0.43
LINC00963-204ENST00000427778 LTN1O94822 1766 aa12.38□□□□□ -0.43
LINC00963-204ENST00000427778 SPATA31A5Q5VU36 1347 aa12.37□□□□□ -0.43
LINC00963-204ENST00000427778 SPATA31A7Q8IWB4 1347 aa12.37□□□□□ -0.43
LINC00963-204ENST00000427778 PPP1R1BQ9UD71 204 aaPredicted RBP12.37□□□□□ -0.43
LINC00963-204ENST00000427778 COL5A2P05997 1499 aaPredicted RBP12.37□□□□□ -0.43
LINC00963-204ENST00000427778 RGPD5Q99666 1765 aa12.37□□□□□ -0.43
LINC00963-204ENST00000427778 OVOS2A0A0J9YW53 1432 aa12.37□□□□□ -0.43
LINC00963-204ENST00000427778 OVOS2Q6IE36 1432 aa12.37□□□□□ -0.43
LINC00963-204ENST00000427778 SENP3-EIF4A1A0A087X0R7 540 aa12.36□□□□□ -0.43
LINC00963-204ENST00000427778 ZC3H6P61129 1189 aaKnown RBP12.36□□□□□ -0.43
LINC00963-204ENST00000427778 KCNH5Q8NCM2 988 aa12.36□□□□□ -0.43
LINC00963-204ENST00000427778 TMC1Q8TDI8 760 aa12.36□□□□□ -0.43
LINC00963-204ENST00000427778 UTRNP46939 3433 aa12.36□□□□□ -0.43
LINC00963-204ENST00000427778 KIF20BQ96Q89 1820 aa12.36□□□□□ -0.43
LINC00963-204ENST00000427778 WNK3Q9BYP7 1800 aa12.36□□□□□ -0.43
LINC00963-204ENST00000427778 SBF2Q86WG5 1849 aa12.35□□□□□ -0.43
LINC00963-204ENST00000427778 CHRNA2Q15822 529 aa12.35□□□□□ -0.43
LINC00963-204ENST00000427778 CAMKK2Q96RR4 588 aa12.35□□□□□ -0.43
LINC00963-204ENST00000427778 PARP4Q9UKK3 1724 aaKnown RBP12.34□□□□□ -0.43
LINC00963-204ENST00000427778 ARHGEF25Q86VW2 580 aa12.34□□□□□ -0.43
LINC00963-204ENST00000427778 SPATA31A1Q5TZJ5 1347 aa12.34□□□□□ -0.43
LINC00963-204ENST00000427778 SPON1Q9HCB6 807 aa12.33□□□□□ -0.44
LINC00963-204ENST00000427778 CRB1P82279 1406 aa12.32□□□□□ -0.44
LINC00963-204ENST00000427778 TRIM37O94972 964 aa12.32□□□□□ -0.44
LINC00963-204ENST00000427778 EIF4G2P78344 907 aaKnown RBP eCLIP12.32□□□□□ -0.44
LINC00963-204ENST00000427778 NME9Q86XW9 330 aa12.32□□□□□ -0.44
LINC00963-204ENST00000427778 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.32□□□□□ -0.44
LINC00963-204ENST00000427778 FAM208AQ9UK61 1670 aaKnown RBP12.32□□□□□ -0.44
LINC00963-204ENST00000427778 APBA3O96018 575 aa12.31□□□□□ -0.44
LINC00963-204ENST00000427778 NBPF14Q5TI25 921 aa12.31□□□□□ -0.44
LINC00963-204ENST00000427778 BARGINQ6ZT62 677 aa12.31□□□□□ -0.44
LINC00963-204ENST00000427778 ZNF784Q8NCA9 323 aaPredicted RBP12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms