RNA–Protein interactions for RNA: ENST00000427755.2

DEPDC7-203, Transcript of DEP domain containing 7, humanhuman

TSL 2

Gene DEPDC7, Length 1,212 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC7-203ENST00000427755 SOX12O15370 315 aa18.58■□□□□ 0.56
DEPDC7-203ENST00000427755 USP31Q70CQ4 1352 aa18.57■□□□□ 0.56
DEPDC7-203ENST00000427755 C11orf95C9JLR9 678 aaPredicted RBP18.57■□□□□ 0.56
DEPDC7-203ENST00000427755 DDB1Q16531 1140 aa18.57■□□□□ 0.56
DEPDC7-203ENST00000427755 OVOS2A0A0G2JMS6 1433 aa18.57■□□□□ 0.56
DEPDC7-203ENST00000427755 OVOS2A0A0J9YW53 1432 aa18.57■□□□□ 0.56
DEPDC7-203ENST00000427755 OVOS2Q6IE36 1432 aa18.57■□□□□ 0.56
DEPDC7-203ENST00000427755 TONSLQ96HA7 1378 aa18.56■□□□□ 0.56
DEPDC7-203ENST00000427755 AKAP12Q02952 1782 aa18.56■□□□□ 0.56
DEPDC7-203ENST00000427755 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.56■□□□□ 0.56
DEPDC7-203ENST00000427755 CARD10Q9BWT7 1032 aa18.56■□□□□ 0.56
DEPDC7-203ENST00000427755 SLC12A5Q9H2X9 1139 aa18.55■□□□□ 0.56
DEPDC7-203ENST00000427755 PEAK1Q9H792 1746 aa18.54■□□□□ 0.56
DEPDC7-203ENST00000427755 LRRC37A3O60309 1634 aa18.54■□□□□ 0.56
DEPDC7-203ENST00000427755 NME9Q86XW9 330 aa18.54■□□□□ 0.56
DEPDC7-203ENST00000427755 MARCH10Q8NA82 808 aaPredicted RBP18.54■□□□□ 0.56
DEPDC7-203ENST00000427755 CDCA7Q9BWT1 371 aaPredicted RBP18.54■□□□□ 0.56
DEPDC7-203ENST00000427755 BCL9O00512 1426 aa18.53■□□□□ 0.56
DEPDC7-203ENST00000427755 CSB-PGBD3P0DP91 1061 aa18.53■□□□□ 0.56
DEPDC7-203ENST00000427755 PTF1AQ7RTS3 328 aa18.53■□□□□ 0.56
DEPDC7-203ENST00000427755 TMC1Q8TDI8 760 aa18.53■□□□□ 0.56
DEPDC7-203ENST00000427755 PUS7Q96PZ0 661 aaKnown RBP18.53■□□□□ 0.56
DEPDC7-203ENST00000427755 RREB1Q92766 1687 aa18.52■□□□□ 0.56
DEPDC7-203ENST00000427755 ABCC6O95255 1503 aa18.52■□□□□ 0.56
DEPDC7-203ENST00000427755 PLSCR1O15162 318 aa18.51■□□□□ 0.55
DEPDC7-203ENST00000427755 HDGFL2Q7Z4V5 671 aaPredicted RBP18.51■□□□□ 0.55
DEPDC7-203ENST00000427755 TESK2Q96S53 571 aa18.51■□□□□ 0.55
DEPDC7-203ENST00000427755 MON2Q7Z3U7 1717 aa18.51■□□□□ 0.55
DEPDC7-203ENST00000427755 EDC4Q6P2E9 1401 aaKnown RBP18.5■□□□□ 0.55
DEPDC7-203ENST00000427755 NBPF14Q5TI25 921 aa18.5■□□□□ 0.55
DEPDC7-203ENST00000427755 BCL11BQ9C0K0 894 aaPredicted RBP18.5■□□□□ 0.55
DEPDC7-203ENST00000427755 A0A1W2PP64 1363 aa18.5■□□□□ 0.55
DEPDC7-203ENST00000427755 CCDC7Q96M83 1385 aa18.5■□□□□ 0.55
DEPDC7-203ENST00000427755 ERBB3P21860 1342 aa18.49■□□□□ 0.55
DEPDC7-203ENST00000427755 NUP188Q5SRE5 1749 aa18.49■□□□□ 0.55
DEPDC7-203ENST00000427755 TERF2IPQ9NYB0 399 aa18.48■□□□□ 0.55
DEPDC7-203ENST00000427755 USP54Q70EL1 1684 aa18.47■□□□□ 0.55
DEPDC7-203ENST00000427755 ST20-MTHFSA0A0A6YYL1 179 aa18.47■□□□□ 0.55
DEPDC7-203ENST00000427755 EXOC5O00471 708 aa18.47■□□□□ 0.55
DEPDC7-203ENST00000427755 PROM2Q8N271 834 aa18.46■□□□□ 0.55
DEPDC7-203ENST00000427755 ANO8Q9HCE9 1232 aaPredicted RBP18.45■□□□□ 0.54
DEPDC7-203ENST00000427755 TNS2Q63HR2 1409 aa18.45■□□□□ 0.54
DEPDC7-203ENST00000427755 WNK3Q9BYP7 1800 aa18.44■□□□□ 0.54
DEPDC7-203ENST00000427755 NLRP2Q9NX02 1062 aa18.44■□□□□ 0.54
DEPDC7-203ENST00000427755 NINLQ9Y2I6 1382 aa18.43■□□□□ 0.54
DEPDC7-203ENST00000427755 ANKRD24Q8TF21 1146 aa18.43■□□□□ 0.54
DEPDC7-203ENST00000427755 RGPD5Q99666 1765 aa18.42■□□□□ 0.54
DEPDC7-203ENST00000427755 TRIM26Q12899 539 aaPredicted RBP18.42■□□□□ 0.54
DEPDC7-203ENST00000427755 RGPD3A6NKT7 1758 aaPredicted RBP18.41■□□□□ 0.54
DEPDC7-203ENST00000427755 RGPD4Q7Z3J3 1758 aa18.41■□□□□ 0.54
DEPDC7-203ENST00000427755 KCNQ2O43526 872 aa18.41■□□□□ 0.54
DEPDC7-203ENST00000427755 SLC24A1O60721 1099 aa18.4■□□□□ 0.54
DEPDC7-203ENST00000427755 IL2RBP14784 551 aa18.4■□□□□ 0.54
DEPDC7-203ENST00000427755 IP6K1Q92551 441 aa18.4■□□□□ 0.54
DEPDC7-203ENST00000427755 SBF2Q86WG5 1849 aa18.39■□□□□ 0.54
DEPDC7-203ENST00000427755 TXNRD1Q16881 649 aa18.39■□□□□ 0.53
DEPDC7-203ENST00000427755 SPON1Q9HCB6 807 aa18.39■□□□□ 0.53
DEPDC7-203ENST00000427755 ACSBG1Q96GR2 724 aa18.37■□□□□ 0.53
DEPDC7-203ENST00000427755 PDGFDQ9GZP0 370 aaPredicted RBP18.37■□□□□ 0.53
DEPDC7-203ENST00000427755 MAP3K19Q56UN5 1328 aa18.37■□□□□ 0.53
DEPDC7-203ENST00000427755 ANKRD36BQ8N2N9 1353 aa18.37■□□□□ 0.53
DEPDC7-203ENST00000427755 FBLN1P23142 703 aa18.36■□□□□ 0.53
DEPDC7-203ENST00000427755 COG3Q96JB2 828 aa18.36■□□□□ 0.53
DEPDC7-203ENST00000427755 USP47Q96K76 1375 aa18.36■□□□□ 0.53
DEPDC7-203ENST00000427755 HOXC9P31274 260 aa18.34■□□□□ 0.53
DEPDC7-203ENST00000427755 LTN1O94822 1766 aa18.34■□□□□ 0.53
DEPDC7-203ENST00000427755 TMF1P82094 1093 aa18.33■□□□□ 0.52
DEPDC7-203ENST00000427755 LTV1Q96GA3 475 aaPredicted RBP18.33■□□□□ 0.52
DEPDC7-203ENST00000427755 FYB1O15117 783 aa18.32■□□□□ 0.52
DEPDC7-203ENST00000427755 SLC15A2Q16348 729 aa18.32■□□□□ 0.52
DEPDC7-203ENST00000427755 STK32BQ9NY57 414 aa18.32■□□□□ 0.52
DEPDC7-203ENST00000427755 PPP1R1BQ9UD71 204 aaPredicted RBP18.32■□□□□ 0.52
DEPDC7-203ENST00000427755 NHSQ6T4R5 1651 aa18.31■□□□□ 0.52
DEPDC7-203ENST00000427755 CASZ1Q86V15 1759 aa18.3■□□□□ 0.52
DEPDC7-203ENST00000427755 ZBTB7AO95365 584 aa18.3■□□□□ 0.52
DEPDC7-203ENST00000427755 PTGER2P43116 358 aa18.3■□□□□ 0.52
DEPDC7-203ENST00000427755 AMPHP49418 695 aa18.3■□□□□ 0.52
DEPDC7-203ENST00000427755 RRS1Q15050 365 aaKnown RBP18.29■□□□□ 0.52
DEPDC7-203ENST00000427755 DDX54Q8TDD1 881 aaKnown RBP18.29■□□□□ 0.52
DEPDC7-203ENST00000427755 GGNBP2Q9H3C7 697 aa18.29■□□□□ 0.52
DEPDC7-203ENST00000427755 RTL1A6NKG5 1358 aa18.29■□□□□ 0.52
DEPDC7-203ENST00000427755 LRRC4BQ9NT99 713 aa18.27■□□□□ 0.52
DEPDC7-203ENST00000427755 ATF5Q9Y2D1 282 aaPredicted RBP18.26■□□□□ 0.51
DEPDC7-203ENST00000427755 MEGF6O75095 1541 aa18.25■□□□□ 0.51
DEPDC7-203ENST00000427755 PAPPAQ13219 1627 aa18.25■□□□□ 0.51
DEPDC7-203ENST00000427755 ZNF827Q17R98 1081 aa18.25■□□□□ 0.51
DEPDC7-203ENST00000427755 CDCA8Q53HL2 280 aa18.25■□□□□ 0.51
DEPDC7-203ENST00000427755 NBPF6Q5VWK0 638 aa18.25■□□□□ 0.51
DEPDC7-203ENST00000427755 PIAS4Q8N2W9 510 aaPredicted RBP18.25■□□□□ 0.51
DEPDC7-203ENST00000427755 NBPF4Q96M43 638 aa18.25■□□□□ 0.51
DEPDC7-203ENST00000427755 SGIP1Q9BQI5 828 aa18.25■□□□□ 0.51
DEPDC7-203ENST00000427755 CARD14Q9BXL6 1004 aa18.25■□□□□ 0.51
DEPDC7-203ENST00000427755 FAM208AQ9UK61 1670 aaKnown RBP18.25■□□□□ 0.51
DEPDC7-203ENST00000427755 ZCRB1Q8TBF4 217 aaKnown RBP18.24■□□□□ 0.51
DEPDC7-203ENST00000427755 MTFR1LQ9H019 292 aa18.24■□□□□ 0.51
DEPDC7-203ENST00000427755 TIMELESSQ9UNS1 1208 aa18.24■□□□□ 0.51
DEPDC7-203ENST00000427755 NSD2O96028 1365 aa18.23■□□□□ 0.51
DEPDC7-203ENST00000427755 ADRA2BP18089 450 aa18.23■□□□□ 0.51
DEPDC7-203ENST00000427755 PRIM1P49642 420 aaKnown RBP18.23■□□□□ 0.51
DEPDC7-203ENST00000427755 AKT1S1Q96B36 256 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms