RNA–Protein interactions for RNA: ENST00000427447.5

LINC00649-203, long intergenic non-protein coding RNA 649, humanhuman

TSL 1 (best) BASIC

Gene LINC00649, Length 9,124 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-203ENST00000427447 GCKP35557 465 aa9.14□□□□□ -0.95
LINC00649-203ENST00000427447 CCDC40Q4G0X9 1142 aa9.14□□□□□ -0.95
LINC00649-203ENST00000427447 CCDC102AQ96A19 550 aa9.14□□□□□ -0.95
LINC00649-203ENST00000427447 MAPK8IP3Q9UPT6 1336 aa9.14□□□□□ -0.95
LINC00649-203ENST00000427447 ERCC3P19447 782 aa9.14□□□□□ -0.95
LINC00649-203ENST00000427447 RAI14Q9P0K7 980 aa9.14□□□□□ -0.95
LINC00649-203ENST00000427447 PHLDB2Q86SQ0 1253 aa9.14□□□□□ -0.95
LINC00649-203ENST00000427447 PFDN1O60925 122 aa9.14□□□□□ -0.95
LINC00649-203ENST00000427447 DIAPH1O60610 1272 aaKnown RBP9.14□□□□□ -0.95
LINC00649-203ENST00000427447 SF3A1Q15459 793 aaKnown RBP9.14□□□□□ -0.95
LINC00649-203ENST00000427447 RPAP2Q8IXW5 612 aaPredicted RBP9.14□□□□□ -0.95
LINC00649-203ENST00000427447 SPRYD3Q8NCJ5 442 aa9.14□□□□□ -0.95
LINC00649-203ENST00000427447 RTF1Q92541 710 aaKnown RBP9.14□□□□□ -0.95
LINC00649-203ENST00000427447 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.14□□□□□ -0.95
LINC00649-203ENST00000427447 NBPF3Q9H094 633 aa9.14□□□□□ -0.95
LINC00649-203ENST00000427447 TBC1D10BQ4KMP7 808 aaPredicted RBP9.13□□□□□ -0.95
LINC00649-203ENST00000427447 CCDC172P0C7W6 258 aa9.13□□□□□ -0.95
LINC00649-203ENST00000427447 EIF4G2P78344 907 aaKnown RBP eCLIP9.13□□□□□ -0.95
LINC00649-203ENST00000427447 EIF2AQ9BY44 585 aaKnown RBP9.13□□□□□ -0.95
LINC00649-203ENST00000427447 GTF2F1P35269 517 aaKnown RBP eCLIP9.13□□□□□ -0.95
LINC00649-203ENST00000427447 TTC14Q96N46 770 aa9.13□□□□□ -0.95
LINC00649-203ENST00000427447 CLNS1AP54105 237 aaKnown RBP9.13□□□□□ -0.95
LINC00649-203ENST00000427447 CTAGE6Q86UF2 777 aa9.13□□□□□ -0.95
LINC00649-203ENST00000427447 POTEDQ86YR6 584 aa9.13□□□□□ -0.95
LINC00649-203ENST00000427447 ANKS4BQ8N8V4 417 aa9.13□□□□□ -0.95
LINC00649-203ENST00000427447 STMN4Q9H169 189 aaPredicted RBP9.13□□□□□ -0.95
LINC00649-203ENST00000427447 TRDNQ13061 729 aa9.12□□□□□ -0.95
LINC00649-203ENST00000427447 H3BQV1 296 aa9.12□□□□□ -0.95
LINC00649-203ENST00000427447 CCER2I3L3R5 266 aa9.12□□□□□ -0.95
LINC00649-203ENST00000427447 ZFXP17010 805 aaPredicted RBP9.12□□□□□ -0.95
LINC00649-203ENST00000427447 RSF1Q96T23 1441 aaPredicted RBP9.12□□□□□ -0.95
LINC00649-203ENST00000427447 ANKRD24Q8TF21 1146 aa9.12□□□□□ -0.95
LINC00649-203ENST00000427447 CCDC47Q96A33 483 aaKnown RBP9.12□□□□□ -0.95
LINC00649-203ENST00000427447 CCDC94Q9BW85 323 aaPredicted RBP9.12□□□□□ -0.95
LINC00649-203ENST00000427447 CWC22Q9HCG8 908 aaKnown RBP9.12□□□□□ -0.95
LINC00649-203ENST00000427447 CDCA8Q53HL2 280 aa9.12□□□□□ -0.95
LINC00649-203ENST00000427447 ZFP91Q96JP5 570 aaPredicted RBP9.12□□□□□ -0.95
LINC00649-203ENST00000427447 SMC3Q9UQE7 1217 aa9.12□□□□□ -0.95
LINC00649-203ENST00000427447 CCDC148Q8NFR7 591 aa9.12□□□□□ -0.95
LINC00649-203ENST00000427447 BRPF3Q9ULD4 1205 aa9.12□□□□□ -0.95
LINC00649-203ENST00000427447 SPAG9O60271 1321 aaKnown RBP9.12□□□□□ -0.95
LINC00649-203ENST00000427447 KIF7Q2M1P5 1343 aa9.12□□□□□ -0.95
LINC00649-203ENST00000427447 RNF187Q5TA31 235 aaPredicted RBP9.12□□□□□ -0.95
LINC00649-203ENST00000427447 WWC2Q6AWC2 1192 aa9.11□□□□□ -0.95
LINC00649-203ENST00000427447 CTAGE9A4FU28 777 aa9.11□□□□□ -0.95
LINC00649-203ENST00000427447 STIM2Q9P246 746 aa9.11□□□□□ -0.95
LINC00649-203ENST00000427447 EBAG9O00559 213 aa9.11□□□□□ -0.95
LINC00649-203ENST00000427447 SMC2O95347 1197 aa9.11□□□□□ -0.95
LINC00649-203ENST00000427447 CAPZA3Q96KX2 299 aa9.11□□□□□ -0.95
LINC00649-203ENST00000427447 LUC7L3O95232 432 aaKnown RBP9.11□□□□□ -0.95
LINC00649-203ENST00000427447 MYSM1Q5VVJ2 828 aa9.11□□□□□ -0.95
LINC00649-203ENST00000427447 CEP112Q8N8E3 955 aa9.11□□□□□ -0.95
LINC00649-203ENST00000427447 RWDD1Q9H446 243 aaPredicted RBP9.11□□□□□ -0.95
LINC00649-203ENST00000427447 H0YC42 278 aa9.11□□□□□ -0.95
LINC00649-203ENST00000427447 TPD52P55327 224 aaPredicted RBP9.11□□□□□ -0.95
LINC00649-203ENST00000427447 SKILP12757 684 aa9.11□□□□□ -0.95
LINC00649-203ENST00000427447 MSL1Q68DK7 614 aa9.11□□□□□ -0.95
LINC00649-203ENST00000427447 CCDC196A0A1B0GTZ2 297 aa9.1□□□□□ -0.95
LINC00649-203ENST00000427447 VCX3AQ9NNX9 186 aa9.1□□□□□ -0.95
LINC00649-203ENST00000427447 ITGB1BP2Q9UKP3 347 aa9.1□□□□□ -0.95
LINC00649-203ENST00000427447 TTC36A6NLP5 189 aa9.1□□□□□ -0.95
LINC00649-203ENST00000427447 MGEA5O60502 916 aa9.1□□□□□ -0.95
LINC00649-203ENST00000427447 BRD3Q15059 726 aa9.1□□□□□ -0.95
LINC00649-203ENST00000427447 NFKBIBQ15653 356 aa9.1□□□□□ -0.95
LINC00649-203ENST00000427447 PDCD2Q16342 344 aaPredicted RBP9.1□□□□□ -0.95
LINC00649-203ENST00000427447 CEP57Q86XR8 500 aa9.1□□□□□ -0.95
LINC00649-203ENST00000427447 PPM1FP49593 454 aaPredicted RBP9.1□□□□□ -0.95
LINC00649-203ENST00000427447 BICD2Q8TD16 824 aa9.1□□□□□ -0.95
LINC00649-203ENST00000427447 ATAD2Q6PL18 1390 aa9.1□□□□□ -0.95
LINC00649-203ENST00000427447 CACNA2D3Q8IZS8 1091 aa9.1□□□□□ -0.95
LINC00649-203ENST00000427447 FRAT1Q92837 279 aaPredicted RBP9.1□□□□□ -0.95
LINC00649-203ENST00000427447 PAIP2BQ9ULR5 123 aaKnown RBP9.1□□□□□ -0.95
LINC00649-203ENST00000427447 FLOT2Q14254 428 aa9.1□□□□□ -0.95
LINC00649-203ENST00000427447 SELENOSQ9BQE4 189 aa9.1□□□□□ -0.95
LINC00649-203ENST00000427447 CLIP1P30622 1438 aa9.1□□□□□ -0.95
LINC00649-203ENST00000427447 POTEB3A0JP26 581 aa9.09□□□□□ -0.95
LINC00649-203ENST00000427447 SERPINI2O75830 405 aa9.09□□□□□ -0.95
LINC00649-203ENST00000427447 NBPF7P0C2Y1 421 aaPredicted RBP9.09□□□□□ -0.95
LINC00649-203ENST00000427447 POTEBQ6S5H4 581 aa9.09□□□□□ -0.95
LINC00649-203ENST00000427447 FBF1Q8TES7 1133 aa9.09□□□□□ -0.95
LINC00649-203ENST00000427447 TACO1Q9BSH4 297 aaKnown RBP9.09□□□□□ -0.95
LINC00649-203ENST00000427447 GABPB1Q06547 395 aaPredicted RBP9.09□□□□□ -0.95
LINC00649-203ENST00000427447 IQCGQ9H095 443 aaKnown RBP9.09□□□□□ -0.95
LINC00649-203ENST00000427447 SKIDA1Q1XH10 827 aa9.09□□□□□ -0.95
LINC00649-203ENST00000427447 B4GALNT4Q76KP1 1039 aa9.09□□□□□ -0.95
LINC00649-203ENST00000427447 PALM2Q8IXS6 379 aa9.09□□□□□ -0.95
LINC00649-203ENST00000427447 KIF18AQ8NI77 898 aa9.09□□□□□ -0.95
LINC00649-203ENST00000427447 CFAP58Q5T655 872 aa9.09□□□□□ -0.95
LINC00649-203ENST00000427447 TSNAXIP1Q2TAA8 658 aa9.09□□□□□ -0.95
LINC00649-203ENST00000427447 FAM161AQ3B820 660 aa9.09□□□□□ -0.95
LINC00649-203ENST00000427447 TAOK3Q9H2K8 898 aa9.09□□□□□ -0.95
LINC00649-203ENST00000427447 NINLQ9Y2I6 1382 aa9.09□□□□□ -0.95
LINC00649-203ENST00000427447 PEX19P40855 299 aa9.09□□□□□ -0.95
LINC00649-203ENST00000427447 CTNNBL1Q8WYA6 563 aaPredicted RBP9.09□□□□□ -0.95
LINC00649-203ENST00000427447 NMIQ13287 307 aaPredicted RBP9.09□□□□□ -0.95
LINC00649-203ENST00000427447 MRFAP1L1Q96HT8 127 aa9.09□□□□□ -0.95
LINC00649-203ENST00000427447 TSPY26PQ9H489 355 aa9.09□□□□□ -0.95
LINC00649-203ENST00000427447 THEGQ9P2T0 379 aa9.09□□□□□ -0.95
LINC00649-203ENST00000427447 MVPQ14764 893 aaKnown RBP9.08□□□□□ -0.96
LINC00649-203ENST00000427447 OTUD6BQ8N6M0 293 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 85.8 ms