RNA–Protein interactions for RNA: ENST00000427414.2

SH3D19-204, Transcript of SH3 domain containing 19, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SH3D19, Length 2,656 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-204ENST00000427414 RCAN3Q9UKA8 241 aa11.11□□□□□ -0.63
SH3D19-204ENST00000427414 LMOD3Q0VAK6 560 aa11.1□□□□□ -0.63
SH3D19-204ENST00000427414 TCP11L2Q8N4U5 519 aa11.1□□□□□ -0.63
SH3D19-204ENST00000427414 RSPH6AQ9H0K4 717 aa11.1□□□□□ -0.63
SH3D19-204ENST00000427414 MAPK8IP3Q9UPT6 1336 aa11.09□□□□□ -0.63
SH3D19-204ENST00000427414 PSME1Q06323 249 aa11.09□□□□□ -0.63
SH3D19-204ENST00000427414 CAMTA1Q9Y6Y1 1673 aa11.09□□□□□ -0.63
SH3D19-204ENST00000427414 KDRP35968 1356 aa11.09□□□□□ -0.63
SH3D19-204ENST00000427414 MSH6P52701 1360 aa11.09□□□□□ -0.63
SH3D19-204ENST00000427414 ZNF428Q96B54 188 aa11.09□□□□□ -0.63
SH3D19-204ENST00000427414 MYH16Q9H6N6 1097 aa11.09□□□□□ -0.63
SH3D19-204ENST00000427414 USP19O94966 1318 aa11.09□□□□□ -0.63
SH3D19-204ENST00000427414 TNNT2P45379 298 aaPredicted RBP11.08□□□□□ -0.64
SH3D19-204ENST00000427414 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.08□□□□□ -0.64
SH3D19-204ENST00000427414 TMEM94Q12767 1356 aa11.08□□□□□ -0.64
SH3D19-204ENST00000427414 AAMPQ13685 434 aa11.08□□□□□ -0.64
SH3D19-204ENST00000427414 LTN1O94822 1766 aa11.08□□□□□ -0.64
SH3D19-204ENST00000427414 FAM208AQ9UK61 1670 aaKnown RBP11.07□□□□□ -0.64
SH3D19-204ENST00000427414 TMPOP42166 694 aaKnown RBP11.07□□□□□ -0.64
SH3D19-204ENST00000427414 NCAPD2Q15021 1401 aa11.07□□□□□ -0.64
SH3D19-204ENST00000427414 SALL2Q9Y467 1007 aaPredicted RBP11.07□□□□□ -0.64
SH3D19-204ENST00000427414 ATF3P18847 181 aa11.06□□□□□ -0.64
SH3D19-204ENST00000427414 RRP1P56182 461 aaKnown RBP11.06□□□□□ -0.64
SH3D19-204ENST00000427414 CRYBG1Q9Y4K1 1723 aa11.06□□□□□ -0.64
SH3D19-204ENST00000427414 NFE2L2Q16236 605 aa11.06□□□□□ -0.64
SH3D19-204ENST00000427414 HTATSF1O43719 755 aaKnown RBP11.05□□□□□ -0.64
SH3D19-204ENST00000427414 CCDC146Q8IYE0 955 aa11.05□□□□□ -0.64
SH3D19-204ENST00000427414 IL27Q8NEV9 243 aa11.05□□□□□ -0.64
SH3D19-204ENST00000427414 PMFBP1Q8TBY8 1022 aa11.05□□□□□ -0.64
SH3D19-204ENST00000427414 EMILIN1Q9Y6C2 1016 aa11.05□□□□□ -0.64
SH3D19-204ENST00000427414 MAP3K19Q56UN5 1328 aa11.04□□□□□ -0.64
SH3D19-204ENST00000427414 NPHP3Q7Z494 1330 aa11.04□□□□□ -0.64
SH3D19-204ENST00000427414 IGSF1Q8N6C5 1336 aa11.04□□□□□ -0.64
SH3D19-204ENST00000427414 U2SURPO15042 1029 aaKnown RBP11.04□□□□□ -0.64
SH3D19-204ENST00000427414 NLRP6P59044 892 aa11.04□□□□□ -0.64
SH3D19-204ENST00000427414 ESCO1Q5FWF5 840 aa11.04□□□□□ -0.64
SH3D19-204ENST00000427414 RTN4Q9NQC3 1192 aaKnown RBP11.04□□□□□ -0.64
SH3D19-204ENST00000427414 DLG5Q8TDM6 1919 aa11.04□□□□□ -0.64
SH3D19-204ENST00000427414 EIF4A2Q14240 407 aaKnown RBP11.03□□□□□ -0.64
SH3D19-204ENST00000427414 C14orf37Q86TY3 774 aa11.03□□□□□ -0.64
SH3D19-204ENST00000427414 ABTB2Q8N961 1025 aa11.03□□□□□ -0.64
SH3D19-204ENST00000427414 CDCA7LQ96GN5 454 aa11.03□□□□□ -0.64
SH3D19-204ENST00000427414 PXDNQ92626 1479 aa11.03□□□□□ -0.64
SH3D19-204ENST00000427414 NHSL1Q5SYE7 1610 aa11.03□□□□□ -0.64
SH3D19-204ENST00000427414 LMO7Q8WWI1 1683 aa11.03□□□□□ -0.64
SH3D19-204ENST00000427414 BRPF1P55201 1214 aaPredicted RBP11.03□□□□□ -0.64
SH3D19-204ENST00000427414 NPM2Q86SE8 214 aaKnown RBP11.03□□□□□ -0.64
SH3D19-204ENST00000427414 IP6K1Q92551 441 aa11.03□□□□□ -0.64
SH3D19-204ENST00000427414 ZRANB1Q9UGI0 708 aa11.03□□□□□ -0.64
SH3D19-204ENST00000427414 TRIM35Q9UPQ4 493 aa11.03□□□□□ -0.64
SH3D19-204ENST00000427414 SENP3-EIF4A1A0A087X0R7 540 aa11.02□□□□□ -0.64
SH3D19-204ENST00000427414 BABAM1Q9NWV8 329 aa11.02□□□□□ -0.64
SH3D19-204ENST00000427414 HAP1P54257 671 aaPredicted RBP11.02□□□□□ -0.65
SH3D19-204ENST00000427414 LRRC37A3O60309 1634 aa11.02□□□□□ -0.65
SH3D19-204ENST00000427414 SOS1Q07889 1333 aaPredicted RBP11.02□□□□□ -0.65
SH3D19-204ENST00000427414 TNS3Q68CZ2 1445 aa11.02□□□□□ -0.65
SH3D19-204ENST00000427414 MS4A1P11836 297 aa11.02□□□□□ -0.65
SH3D19-204ENST00000427414 HOXC9P31274 260 aa11.01□□□□□ -0.65
SH3D19-204ENST00000427414 PRKAR2BP31323 418 aa11.01□□□□□ -0.65
SH3D19-204ENST00000427414 PDE3AQ14432 1141 aa11.01□□□□□ -0.65
SH3D19-204ENST00000427414 IFT57Q9NWB7 429 aa11.01□□□□□ -0.65
SH3D19-204ENST00000427414 OVOS2A0A0G2JMS6 1433 aa11.01□□□□□ -0.65
SH3D19-204ENST00000427414 KRT28Q7Z3Y7 464 aa11.01□□□□□ -0.65
SH3D19-204ENST00000427414 CPDO75976 1380 aa11.01□□□□□ -0.65
SH3D19-204ENST00000427414 AMPHP49418 695 aa11□□□□□ -0.65
SH3D19-204ENST00000427414 RIPK4P57078 832 aa11□□□□□ -0.65
SH3D19-204ENST00000427414 RRS1Q15050 365 aaKnown RBP11□□□□□ -0.65
SH3D19-204ENST00000427414 ZNF853P0CG23 659 aa11□□□□□ -0.65
SH3D19-204ENST00000427414 GNAI1P63096 354 aa11□□□□□ -0.65
SH3D19-204ENST00000427414 LAS1LQ9Y4W2 734 aaKnown RBP11□□□□□ -0.65
SH3D19-204ENST00000427414 COL18A1P39060 1754 aa10.99□□□□□ -0.65
SH3D19-204ENST00000427414 NUTM2FA1L443 756 aa10.99□□□□□ -0.65
SH3D19-204ENST00000427414 ALDH1L2Q3SY69 923 aa10.99□□□□□ -0.65
SH3D19-204ENST00000427414 GAS2L2Q8NHY3 880 aa10.99□□□□□ -0.65
SH3D19-204ENST00000427414 ARHGEF25Q86VW2 580 aa10.99□□□□□ -0.65
SH3D19-204ENST00000427414 ORAI2Q96SN7 254 aa10.98□□□□□ -0.65
SH3D19-204ENST00000427414 SOS2Q07890 1332 aaPredicted RBP10.98□□□□□ -0.65
SH3D19-204ENST00000427414 PPM1GO15355 546 aaPredicted RBP10.97□□□□□ -0.65
SH3D19-204ENST00000427414 SPATA31A3Q5VYP0 1347 aa10.97□□□□□ -0.65
SH3D19-204ENST00000427414 KIAA0232Q92628 1395 aa10.97□□□□□ -0.65
SH3D19-204ENST00000427414 AHDC1Q5TGY3 1603 aaPredicted RBP10.97□□□□□ -0.65
SH3D19-204ENST00000427414 ADAMTS7Q9UKP4 1686 aa10.97□□□□□ -0.65
SH3D19-204ENST00000427414 HSPA2P54652 639 aa10.97□□□□□ -0.65
SH3D19-204ENST00000427414 HSP90AB2PQ58FF8 381 aa10.97□□□□□ -0.65
SH3D19-204ENST00000427414 CFAP44Q96MT7 982 aa10.97□□□□□ -0.65
SH3D19-204ENST00000427414 SPINK5Q9NQ38 1064 aaPredicted RBP10.97□□□□□ -0.65
SH3D19-204ENST00000427414 GCP02774 474 aa10.96□□□□□ -0.65
SH3D19-204ENST00000427414 USP35Q9P2H5 1018 aa10.96□□□□□ -0.65
SH3D19-204ENST00000427414 COL22A1Q8NFW1 1626 aaPredicted RBP10.96□□□□□ -0.66
SH3D19-204ENST00000427414 ABCA3Q99758 1704 aa10.96□□□□□ -0.66
SH3D19-204ENST00000427414 LTBP4Q8N2S1 1624 aa10.95□□□□□ -0.66
SH3D19-204ENST00000427414 RARSP54136 660 aaKnown RBP10.95□□□□□ -0.66
SH3D19-204ENST00000427414 SULT6B1Q6IMI4 303 aa10.95□□□□□ -0.66
SH3D19-204ENST00000427414 CHMP4AQ9BY43 222 aa10.95□□□□□ -0.66
SH3D19-204ENST00000427414 TCERG1O14776 1098 aaKnown RBP10.95□□□□□ -0.66
SH3D19-204ENST00000427414 EYA1Q99502 592 aa10.95□□□□□ -0.66
SH3D19-204ENST00000427414 FOXO3O43524 673 aa10.94□□□□□ -0.66
SH3D19-204ENST00000427414 PDE4AP27815 886 aa10.94□□□□□ -0.66
SH3D19-204ENST00000427414 ARHGAP45Q92619 1136 aa10.94□□□□□ -0.66
SH3D19-204ENST00000427414 PHACTR3Q96KR7 559 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms