RNA–Protein interactions for RNA: ENST00000427383.6

CHEK1-202, Transcript of checkpoint kinase 1, humanhuman

TSL 1 (best) BASIC

Gene CHEK1, Length 1,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK1-202ENST00000427383 APAF1O14727 1248 aa22.7■■□□□ 1.22
CHEK1-202ENST00000427383 AMPHP49418 695 aa22.7■■□□□ 1.22
CHEK1-202ENST00000427383 ARHGEF25Q86VW2 580 aa22.7■■□□□ 1.22
CHEK1-202ENST00000427383 RSPH6AQ9H0K4 717 aa22.7■■□□□ 1.22
CHEK1-202ENST00000427383 ABCC6O95255 1503 aa22.69■■□□□ 1.22
CHEK1-202ENST00000427383 FCHSD2O94868 740 aa22.69■■□□□ 1.22
CHEK1-202ENST00000427383 COL18A1P39060 1754 aa22.69■■□□□ 1.22
CHEK1-202ENST00000427383 NGEFQ8N5V2 710 aa22.68■■□□□ 1.22
CHEK1-202ENST00000427383 IP6K1Q92551 441 aa22.68■■□□□ 1.22
CHEK1-202ENST00000427383 COL16A1Q07092 1604 aaPredicted RBP22.67■■□□□ 1.22
CHEK1-202ENST00000427383 COL22A1Q8NFW1 1626 aaPredicted RBP22.66■■□□□ 1.22
CHEK1-202ENST00000427383 RGPD5Q99666 1765 aa22.66■■□□□ 1.22
CHEK1-202ENST00000427383 KDRP35968 1356 aa22.66■■□□□ 1.22
CHEK1-202ENST00000427383 CAMTA1Q9Y6Y1 1673 aa22.66■■□□□ 1.22
CHEK1-202ENST00000427383 NCBP3Q53F19 620 aaKnown RBP22.65■■□□□ 1.22
CHEK1-202ENST00000427383 TCP11L2Q8N4U5 519 aa22.65■■□□□ 1.22
CHEK1-202ENST00000427383 SALL2Q9Y467 1007 aaPredicted RBP22.65■■□□□ 1.22
CHEK1-202ENST00000427383 IGSF1Q8N6C5 1336 aa22.65■■□□□ 1.22
CHEK1-202ENST00000427383 PHF23Q9BUL5 403 aaPredicted RBP22.65■■□□□ 1.22
CHEK1-202ENST00000427383 CPDO75976 1380 aa22.64■■□□□ 1.22
CHEK1-202ENST00000427383 PHLPP1O60346 1717 aa22.64■■□□□ 1.21
CHEK1-202ENST00000427383 HMOX1P09601 288 aa22.63■■□□□ 1.21
CHEK1-202ENST00000427383 PDE3BQ13370 1112 aa22.63■■□□□ 1.21
CHEK1-202ENST00000427383 PNNQ9H307 717 aaKnown RBP22.63■■□□□ 1.21
CHEK1-202ENST00000427383 RGPD2P0DJD1 1756 aa22.63■■□□□ 1.21
CHEK1-202ENST00000427383 PRKAR2BP31323 418 aa22.62■■□□□ 1.21
CHEK1-202ENST00000427383 CABLES1Q8TDN4 633 aa22.62■■□□□ 1.21
CHEK1-202ENST00000427383 LMO7Q8WWI1 1683 aa22.61■■□□□ 1.21
CHEK1-202ENST00000427383 TOM1O60784 492 aa22.61■■□□□ 1.21
CHEK1-202ENST00000427383 AEBP1Q8IUX7 1158 aa22.61■■□□□ 1.21
CHEK1-202ENST00000427383 NCAPD2Q15021 1401 aa22.6■■□□□ 1.21
CHEK1-202ENST00000427383 CCDC27Q2M243 656 aa22.6■■□□□ 1.21
CHEK1-202ENST00000427383 DLG5Q8TDM6 1919 aa22.6■■□□□ 1.21
CHEK1-202ENST00000427383 MAPK8IP3Q9UPT6 1336 aa22.6■■□□□ 1.21
CHEK1-202ENST00000427383 PLEKHG5O94827 1062 aa22.59■■□□□ 1.21
CHEK1-202ENST00000427383 EYA1Q99502 592 aa22.59■■□□□ 1.21
CHEK1-202ENST00000427383 FAM208AQ9UK61 1670 aaKnown RBP22.59■■□□□ 1.21
CHEK1-202ENST00000427383 ZC3H6P61129 1189 aaKnown RBP22.58■■□□□ 1.21
CHEK1-202ENST00000427383 SULT6B1Q6IMI4 303 aa22.58■■□□□ 1.21
CHEK1-202ENST00000427383 TMPOP42166 694 aaKnown RBP22.58■■□□□ 1.2
CHEK1-202ENST00000427383 RRP7AQ9Y3A4 280 aaKnown RBP22.58■■□□□ 1.2
CHEK1-202ENST00000427383 KIAA0232Q92628 1395 aa22.57■■□□□ 1.2
CHEK1-202ENST00000427383 WWC1Q8IX03 1113 aa22.57■■□□□ 1.2
CHEK1-202ENST00000427383 LRRC59Q96AG4 307 aaKnown RBP22.57■■□□□ 1.2
CHEK1-202ENST00000427383 PHACTR3Q96KR7 559 aa22.57■■□□□ 1.2
CHEK1-202ENST00000427383 AXIN2Q9Y2T1 843 aa22.57■■□□□ 1.2
CHEK1-202ENST00000427383 CDCA7LQ96GN5 454 aa22.56■■□□□ 1.2
CHEK1-202ENST00000427383 ERBB3P21860 1342 aa22.55■■□□□ 1.2
CHEK1-202ENST00000427383 ZBTB7CA1YPR0 619 aa22.54■■□□□ 1.2
CHEK1-202ENST00000427383 UBAP1LF5GYI3 381 aa22.53■■□□□ 1.2
CHEK1-202ENST00000427383 GOLGA2Q08379 1002 aa22.53■■□□□ 1.2
CHEK1-202ENST00000427383 NEUROD2Q15784 382 aa22.53■■□□□ 1.2
CHEK1-202ENST00000427383 CERKQ8TCT0 537 aa22.53■■□□□ 1.2
CHEK1-202ENST00000427383 LTV1Q96GA3 475 aaPredicted RBP22.52■■□□□ 1.2
CHEK1-202ENST00000427383 TRIM35Q9UPQ4 493 aa22.52■■□□□ 1.2
CHEK1-202ENST00000427383 NFE2L2Q16236 605 aa22.52■■□□□ 1.2
CHEK1-202ENST00000427383 ANKRD24Q8TF21 1146 aa22.52■■□□□ 1.2
CHEK1-202ENST00000427383 NEFMP07197 916 aa22.51■■□□□ 1.19
CHEK1-202ENST00000427383 PIP4K2BP78356 416 aa22.51■■□□□ 1.19
CHEK1-202ENST00000427383 NBPF6Q5VWK0 638 aa22.51■■□□□ 1.19
CHEK1-202ENST00000427383 TRMT2AQ8IZ69 625 aaKnown RBP22.51■■□□□ 1.19
CHEK1-202ENST00000427383 NBPF4Q96M43 638 aa22.51■■□□□ 1.19
CHEK1-202ENST00000427383 SLFN5Q08AF3 891 aa22.5■■□□□ 1.19
CHEK1-202ENST00000427383 SPINK5Q9NQ38 1064 aaPredicted RBP22.5■■□□□ 1.19
CHEK1-202ENST00000427383 DUSP27Q5VZP5 1158 aa22.49■■□□□ 1.19
CHEK1-202ENST00000427383 WDR63Q8IWG1 891 aa22.49■■□□□ 1.19
CHEK1-202ENST00000427383 RIPK4P57078 832 aa22.49■■□□□ 1.19
CHEK1-202ENST00000427383 CHRNA2Q15822 529 aa22.49■■□□□ 1.19
CHEK1-202ENST00000427383 COL5A2P05997 1499 aaPredicted RBP22.47■■□□□ 1.19
CHEK1-202ENST00000427383 COL14A1Q05707 1796 aaKnown RBP22.47■■□□□ 1.19
CHEK1-202ENST00000427383 E9PSI1 815 aa22.46■■□□□ 1.19
CHEK1-202ENST00000427383 PRDM11Q9NQV5 511 aa22.46■■□□□ 1.19
CHEK1-202ENST00000427383 USHBP1Q8N6Y0 703 aa22.46■■□□□ 1.19
CHEK1-202ENST00000427383 HAP1P54257 671 aaPredicted RBP22.44■■□□□ 1.18
CHEK1-202ENST00000427383 IL16Q14005 1332 aa22.44■■□□□ 1.18
CHEK1-202ENST00000427383 LRRC37A3O60309 1634 aa22.43■■□□□ 1.18
CHEK1-202ENST00000427383 MTHFSDQ2M296 383 aaKnown RBP22.42■■□□□ 1.18
CHEK1-202ENST00000427383 PLEKHG2Q9H7P9 1386 aa22.41■■□□□ 1.18
CHEK1-202ENST00000427383 PLCH1Q4KWH8 1693 aa22.41■■□□□ 1.18
CHEK1-202ENST00000427383 LMOD3Q0VAK6 560 aa22.4■■□□□ 1.18
CHEK1-202ENST00000427383 FAM83GA6ND36 823 aa22.39■■□□□ 1.18
CHEK1-202ENST00000427383 GAS2L2Q8NHY3 880 aa22.39■■□□□ 1.18
CHEK1-202ENST00000427383 WDR17Q8IZU2 1322 aa22.39■■□□□ 1.18
CHEK1-202ENST00000427383 PKD1L3Q7Z443 1732 aa22.39■■□□□ 1.17
CHEK1-202ENST00000427383 RNF123Q5XPI4 1314 aa22.38■■□□□ 1.17
CHEK1-202ENST00000427383 SUPT16HQ9Y5B9 1047 aaKnown RBP22.37■■□□□ 1.17
CHEK1-202ENST00000427383 MEGF6O75095 1541 aa22.37■■□□□ 1.17
CHEK1-202ENST00000427383 NRAPQ86VF7 1730 aa22.36■■□□□ 1.17
CHEK1-202ENST00000427383 PARP4Q9UKK3 1724 aaKnown RBP22.36■■□□□ 1.17
CHEK1-202ENST00000427383 THUMPD2Q9BTF0 503 aaKnown RBP22.36■■□□□ 1.17
CHEK1-202ENST00000427383 MYH16Q9H6N6 1097 aa22.36■■□□□ 1.17
CHEK1-202ENST00000427383 NLRP2Q9NX02 1062 aa22.36■■□□□ 1.17
CHEK1-202ENST00000427383 GTF3C3Q9Y5Q9 886 aa22.36■■□□□ 1.17
CHEK1-202ENST00000427383 VIRMAQ69YN4 1812 aaKnown RBP22.35■■□□□ 1.17
CHEK1-202ENST00000427383 FANCIQ9NVI1 1328 aa22.35■■□□□ 1.17
CHEK1-202ENST00000427383 MAP3K5Q99683 1374 aa22.35■■□□□ 1.17
CHEK1-202ENST00000427383 JCADQ9P266 1359 aa22.35■■□□□ 1.17
CHEK1-202ENST00000427383 ADAMTS7Q9UKP4 1686 aa22.34■■□□□ 1.17
CHEK1-202ENST00000427383 CSB-PGBD3P0DP91 1061 aa22.34■■□□□ 1.17
CHEK1-202ENST00000427383 CALD1Q05682 793 aaKnown RBP22.34■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms