RNA–Protein interactions for RNA: ENST00000427076.5

POLR2J4-202, Transcript of RNA polymerase II subunit J4, pseudogene, humanhuman

TSL 1 (best) BASIC

Gene POLR2J4, Length 6,466 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J4-202ENST00000427076 SART3Q15020 963 aaKnown RBP13.41□□□□□ -0.26
POLR2J4-202ENST00000427076 ATF3P18847 181 aa13.41□□□□□ -0.26
POLR2J4-202ENST00000427076 HSP90AB4PQ58FF6 505 aa13.4□□□□□ -0.26
POLR2J4-202ENST00000427076 CCDC91Q7Z6B0 441 aa13.4□□□□□ -0.26
POLR2J4-202ENST00000427076 ESPNB1AK53 854 aa13.4□□□□□ -0.26
POLR2J4-202ENST00000427076 SSBP05455 408 aaKnown RBP eCLIP13.4□□□□□ -0.26
POLR2J4-202ENST00000427076 LMAN1P49257 510 aa13.4□□□□□ -0.26
POLR2J4-202ENST00000427076 ROCK1Q13464 1354 aa13.4□□□□□ -0.26
POLR2J4-202ENST00000427076 ZBED9Q6R2W3 1325 aa13.4□□□□□ -0.26
POLR2J4-202ENST00000427076 TRMT1Q9NXH9 659 aaKnown RBP13.4□□□□□ -0.26
POLR2J4-202ENST00000427076 DIAPH1O60610 1272 aaKnown RBP13.4□□□□□ -0.26
POLR2J4-202ENST00000427076 LUC7LQ9NQ29 371 aaKnown RBP13.39□□□□□ -0.27
POLR2J4-202ENST00000427076 PIBF1Q8WXW3 757 aa13.39□□□□□ -0.27
POLR2J4-202ENST00000427076 UACAQ9BZF9 1416 aa13.39□□□□□ -0.27
POLR2J4-202ENST00000427076 PIP4K2AP48426 406 aaPredicted RBP13.39□□□□□ -0.27
POLR2J4-202ENST00000427076 UBTFL1P0CB47 393 aaPredicted RBP13.39□□□□□ -0.27
POLR2J4-202ENST00000427076 FMN1Q68DA7 1419 aa13.38□□□□□ -0.27
POLR2J4-202ENST00000427076 IQCEQ6IPM2 695 aa13.38□□□□□ -0.27
POLR2J4-202ENST00000427076 CERS3Q8IU89 383 aa13.38□□□□□ -0.27
POLR2J4-202ENST00000427076 PDIA4P13667 645 aaKnown RBP13.38□□□□□ -0.27
POLR2J4-202ENST00000427076 TAF4BQ92750 862 aa13.38□□□□□ -0.27
POLR2J4-202ENST00000427076 PSMD1Q99460 953 aa13.38□□□□□ -0.27
POLR2J4-202ENST00000427076 CRACR2AQ9BSW2 395 aa13.38□□□□□ -0.27
POLR2J4-202ENST00000427076 SKAP1Q86WV1 359 aa13.38□□□□□ -0.27
POLR2J4-202ENST00000427076 CCDC144AA2RUR9 1427 aa13.38□□□□□ -0.27
POLR2J4-202ENST00000427076 STIM1Q13586 685 aa13.37□□□□□ -0.27
POLR2J4-202ENST00000427076 NUP133Q8WUM0 1156 aa13.37□□□□□ -0.27
POLR2J4-202ENST00000427076 RAPGEF4Q8WZA2 1011 aa13.37□□□□□ -0.27
POLR2J4-202ENST00000427076 KIF7Q2M1P5 1343 aa13.37□□□□□ -0.27
POLR2J4-202ENST00000427076 UBXN4Q92575 508 aa13.37□□□□□ -0.27
POLR2J4-202ENST00000427076 TDRD9Q8NDG6 1382 aaKnown RBP13.37□□□□□ -0.27
POLR2J4-202ENST00000427076 SYCE3A1L190 88 aa13.36□□□□□ -0.27
POLR2J4-202ENST00000427076 PPARDQ03181 441 aa13.36□□□□□ -0.27
POLR2J4-202ENST00000427076 JAKMIP3Q5VZ66 844 aa13.36□□□□□ -0.27
POLR2J4-202ENST00000427076 KIF6Q6ZMV9 814 aa13.36□□□□□ -0.27
POLR2J4-202ENST00000427076 DACH1Q9UI36 760 aa13.36□□□□□ -0.27
POLR2J4-202ENST00000427076 CBFA2T2O43439 604 aa13.36□□□□□ -0.27
POLR2J4-202ENST00000427076 EPB41L2O43491 1005 aaKnown RBP13.36□□□□□ -0.27
POLR2J4-202ENST00000427076 ABCC8Q09428 1581 aa13.36□□□□□ -0.27
POLR2J4-202ENST00000427076 NLRP2Q9NX02 1062 aa13.36□□□□□ -0.27
POLR2J4-202ENST00000427076 TBC1D2BQ9UPU7 963 aa13.36□□□□□ -0.27
POLR2J4-202ENST00000427076 LIG1P18858 919 aa13.36□□□□□ -0.27
POLR2J4-202ENST00000427076 RBM42Q9BTD8 480 aaKnown RBP13.36□□□□□ -0.27
POLR2J4-202ENST00000427076 RAI14Q9P0K7 980 aa13.36□□□□□ -0.27
POLR2J4-202ENST00000427076 CALCOCO1Q9P1Z2 691 aa13.36□□□□□ -0.27
POLR2J4-202ENST00000427076 SURF6O75683 361 aaKnown RBP13.35□□□□□ -0.27
POLR2J4-202ENST00000427076 CCDC148Q8NFR7 591 aa13.35□□□□□ -0.27
POLR2J4-202ENST00000427076 VGFO15240 615 aaPredicted RBP13.35□□□□□ -0.27
POLR2J4-202ENST00000427076 STAMBPO95630 424 aa13.35□□□□□ -0.27
POLR2J4-202ENST00000427076 CCDC178Q5BJE1 867 aa13.35□□□□□ -0.27
POLR2J4-202ENST00000427076 EIF5P55010 431 aaKnown RBP13.35□□□□□ -0.27
POLR2J4-202ENST00000427076 DNAAF4Q8WXU2 420 aa13.35□□□□□ -0.27
POLR2J4-202ENST00000427076 PRKRIP1Q9H875 184 aaPredicted RBP13.35□□□□□ -0.27
POLR2J4-202ENST00000427076 TERF1P54274 439 aa13.35□□□□□ -0.27
POLR2J4-202ENST00000427076 ARHGAP29Q52LW3 1261 aa13.35□□□□□ -0.27
POLR2J4-202ENST00000427076 IFFO1Q0D2I5 559 aa13.34□□□□□ -0.27
POLR2J4-202ENST00000427076 CCDC18Q5T9S5 1454 aa13.34□□□□□ -0.27
POLR2J4-202ENST00000427076 ANAPC15P60006 121 aa13.34□□□□□ -0.27
POLR2J4-202ENST00000427076 NACADO15069 1562 aa13.34□□□□□ -0.27
POLR2J4-202ENST00000427076 TTC39AQ5SRH9 613 aa13.34□□□□□ -0.27
POLR2J4-202ENST00000427076 CASQ1P31415 396 aa13.34□□□□□ -0.27
POLR2J4-202ENST00000427076 C16orf45Q96MC5 204 aaPredicted RBP13.34□□□□□ -0.27
POLR2J4-202ENST00000427076 ZNF830Q96NB3 372 aaPredicted RBP13.34□□□□□ -0.27
POLR2J4-202ENST00000427076 ZSWIM4Q9H7M6 989 aa13.34□□□□□ -0.27
POLR2J4-202ENST00000427076 SMC1AQ14683 1233 aaKnown RBP13.33□□□□□ -0.28
POLR2J4-202ENST00000427076 CYB5RLQ6IPT4 315 aa13.33□□□□□ -0.28
POLR2J4-202ENST00000427076 CTNNBL1Q8WYA6 563 aaPredicted RBP13.33□□□□□ -0.28
POLR2J4-202ENST00000427076 UPF3BQ9BZI7 483 aaKnown RBP13.33□□□□□ -0.28
POLR2J4-202ENST00000427076 TDO2P48775 406 aa13.33□□□□□ -0.28
POLR2J4-202ENST00000427076 SF3B2Q13435 895 aaKnown RBP13.33□□□□□ -0.28
POLR2J4-202ENST00000427076 TXLNBQ8N3L3 684 aa13.33□□□□□ -0.28
POLR2J4-202ENST00000427076 FAM160A1Q05DH4 1040 aa13.33□□□□□ -0.28
POLR2J4-202ENST00000427076 FLIIQ13045 1269 aa13.33□□□□□ -0.28
POLR2J4-202ENST00000427076 RSPH14Q9UHP6 348 aa13.33□□□□□ -0.28
POLR2J4-202ENST00000427076 CCDC69A6NI79 296 aa13.33□□□□□ -0.28
POLR2J4-202ENST00000427076 PDCP20941 246 aa13.33□□□□□ -0.28
POLR2J4-202ENST00000427076 RBM5P52756 815 aaKnown RBP eCLIP13.33□□□□□ -0.28
POLR2J4-202ENST00000427076 SPATA32Q96LK8 384 aa13.33□□□□□ -0.28
POLR2J4-202ENST00000427076 PDZRN3Q9UPQ7 1066 aa13.33□□□□□ -0.28
POLR2J4-202ENST00000427076 DDX11Q96FC9 970 aa13.32□□□□□ -0.28
POLR2J4-202ENST00000427076 TIGD1Q96MW7 591 aa13.32□□□□□ -0.28
POLR2J4-202ENST00000427076 DDX23Q9BUQ8 820 aaKnown RBP13.32□□□□□ -0.28
POLR2J4-202ENST00000427076 GSTTP1A0A1W2PQM5 241 aa13.32□□□□□ -0.28
POLR2J4-202ENST00000427076 CFAP100Q494V2 611 aa13.32□□□□□ -0.28
POLR2J4-202ENST00000427076 PDS5BQ9NTI5 1447 aa13.32□□□□□ -0.28
POLR2J4-202ENST00000427076 CECR2Q9BXF3 1484 aa13.32□□□□□ -0.28
POLR2J4-202ENST00000427076 JMYQ8N9B5 988 aa13.32□□□□□ -0.28
POLR2J4-202ENST00000427076 LARP1BQ659C4 914 aaKnown RBP13.32□□□□□ -0.28
POLR2J4-202ENST00000427076 CEP57Q86XR8 500 aa13.32□□□□□ -0.28
POLR2J4-202ENST00000427076 MICALL1Q8N3F8 863 aa13.32□□□□□ -0.28
POLR2J4-202ENST00000427076 FHOD3Q2V2M9 1422 aa13.31□□□□□ -0.28
POLR2J4-202ENST00000427076 URI1O94763 535 aaPredicted RBP13.31□□□□□ -0.28
POLR2J4-202ENST00000427076 SLC3A2P08195 630 aaKnown RBP13.31□□□□□ -0.28
POLR2J4-202ENST00000427076 SIL1Q9H173 461 aa13.31□□□□□ -0.28
POLR2J4-202ENST00000427076 STRN4Q9NRL3 753 aa13.31□□□□□ -0.28
POLR2J4-202ENST00000427076 C10orf67Q8IYJ2 551 aa13.31□□□□□ -0.28
POLR2J4-202ENST00000427076 SCLT1Q96NL6 688 aa13.31□□□□□ -0.28
POLR2J4-202ENST00000427076 MACROD2A1Z1Q3 448 aa13.31□□□□□ -0.28
POLR2J4-202ENST00000427076 PPM1EQ8WY54 764 aa13.31□□□□□ -0.28
POLR2J4-202ENST00000427076 CYP46A1Q9Y6A2 500 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms