RNA–Protein interactions for RNA: ENST00000426882.5

HCG18-235, Transcript of HLA complex group 18, humanhuman

TSL 1 (best) BASIC

Gene HCG18, Length 4,862 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG18-235ENST00000426882 MCM10Q7L590 875 aa23.63■■□□□ 1.37
HCG18-235ENST00000426882 HOMER1Q86YM7 354 aa23.63■■□□□ 1.37
HCG18-235ENST00000426882 IFT57Q9NWB7 429 aa23.63■■□□□ 1.37
HCG18-235ENST00000426882 IDI1Q13907 227 aa23.63■■□□□ 1.37
HCG18-235ENST00000426882 IL1RAPL2Q9NP60 686 aa23.63■■□□□ 1.37
HCG18-235ENST00000426882 SIL1Q9H173 461 aa23.62■■□□□ 1.37
HCG18-235ENST00000426882 MIS18AQ9NYP9 233 aa23.62■■□□□ 1.37
HCG18-235ENST00000426882 NME9Q86XW9 330 aa23.62■■□□□ 1.37
HCG18-235ENST00000426882 TSPY26PQ9H489 355 aa23.62■■□□□ 1.37
HCG18-235ENST00000426882 CYP46A1Q9Y6A2 500 aa23.62■■□□□ 1.37
HCG18-235ENST00000426882 EXOC6BQ9Y2D4 811 aa23.61■■□□□ 1.37
HCG18-235ENST00000426882 FAM135AQ9P2D6 1515 aa23.61■■□□□ 1.37
HCG18-235ENST00000426882 R3HCC1Q9Y3T6 440 aaKnown RBP23.61■■□□□ 1.37
HCG18-235ENST00000426882 EMILIN1Q9Y6C2 1016 aa23.61■■□□□ 1.37
HCG18-235ENST00000426882 LETM1O95202 739 aaPredicted RBP23.6■■□□□ 1.37
HCG18-235ENST00000426882 TPM2P07951 284 aa23.6■■□□□ 1.37
HCG18-235ENST00000426882 NOS1P29475 1434 aa23.6■■□□□ 1.37
HCG18-235ENST00000426882 ANKRD20A12PQ8NF67 263 aa23.6■■□□□ 1.37
HCG18-235ENST00000426882 VSIG10Q8N0Z9 540 aa23.59■■□□□ 1.37
HCG18-235ENST00000426882 WDR33Q9C0J8 1336 aaKnown RBP23.58■■□□□ 1.37
HCG18-235ENST00000426882 CCDC173Q0VFZ6 552 aa23.58■■□□□ 1.37
HCG18-235ENST00000426882 TRIM27P14373 513 aa23.58■■□□□ 1.37
HCG18-235ENST00000426882 C14orf93Q9H972 538 aaKnown RBP23.58■■□□□ 1.36
HCG18-235ENST00000426882 DHX16O60231 1041 aaKnown RBP23.58■■□□□ 1.36
HCG18-235ENST00000426882 GRPEL1Q9HAV7 217 aa23.58■■□□□ 1.36
HCG18-235ENST00000426882 UNC13AQ9UPW8 1703 aa23.57■■□□□ 1.36
HCG18-235ENST00000426882 A0A0U1RQG5 324 aaPredicted RBP23.56■■□□□ 1.36
HCG18-235ENST00000426882 GNAT3A8MTJ3 354 aa23.56■■□□□ 1.36
HCG18-235ENST00000426882 TBC1D2BQ9UPU7 963 aa23.56■■□□□ 1.36
HCG18-235ENST00000426882 MYL6BP14649 208 aa23.56■■□□□ 1.36
HCG18-235ENST00000426882 RAD21O60216 631 aa23.56■■□□□ 1.36
HCG18-235ENST00000426882 FBXO31Q5XUX0 539 aaPredicted RBP23.56■■□□□ 1.36
HCG18-235ENST00000426882 CCDC47Q96A33 483 aaKnown RBP23.56■■□□□ 1.36
HCG18-235ENST00000426882 TRIM5Q9C035 493 aa23.56■■□□□ 1.36
HCG18-235ENST00000426882 NAT10Q9H0A0 1025 aaKnown RBP23.56■■□□□ 1.36
HCG18-235ENST00000426882 IPO7O95373 1038 aaKnown RBP23.56■■□□□ 1.36
HCG18-235ENST00000426882 BTBD11A6QL63 1104 aa23.55■■□□□ 1.36
HCG18-235ENST00000426882 AACSQ86V21 672 aa23.55■■□□□ 1.36
HCG18-235ENST00000426882 KINO60870 393 aaKnown RBP23.55■■□□□ 1.36
HCG18-235ENST00000426882 RALGAPBQ86X10 1494 aa23.55■■□□□ 1.36
HCG18-235ENST00000426882 PCMTD1Q96MG8 357 aaPredicted RBP23.55■■□□□ 1.36
HCG18-235ENST00000426882 RBM42Q9BTD8 480 aaKnown RBP23.55■■□□□ 1.36
HCG18-235ENST00000426882 CABP4P57796 275 aa23.54■■□□□ 1.36
HCG18-235ENST00000426882 FAM177BA6PVY3 158 aa23.54■■□□□ 1.36
HCG18-235ENST00000426882 FYB1O15117 783 aa23.54■■□□□ 1.36
HCG18-235ENST00000426882 CWC27Q6UX04 472 aaKnown RBP23.53■■□□□ 1.36
HCG18-235ENST00000426882 SMARCA5O60264 1052 aaPredicted RBP23.53■■□□□ 1.36
HCG18-235ENST00000426882 KDM4AO75164 1064 aa23.53■■□□□ 1.36
HCG18-235ENST00000426882 STK3Q13188 491 aa23.53■■□□□ 1.36
HCG18-235ENST00000426882 ANKLE2Q86XL3 938 aa23.53■■□□□ 1.36
HCG18-235ENST00000426882 STRN4Q9NRL3 753 aa23.53■■□□□ 1.36
HCG18-235ENST00000426882 KIF6Q6ZMV9 814 aa23.52■■□□□ 1.36
HCG18-235ENST00000426882 AEBP1Q8IUX7 1158 aa23.52■■□□□ 1.36
HCG18-235ENST00000426882 TNNT3P45378 269 aaPredicted RBP23.52■■□□□ 1.36
HCG18-235ENST00000426882 CEBPZQ03701 1054 aaKnown RBP23.52■■□□□ 1.36
HCG18-235ENST00000426882 ANKRD1Q15327 319 aa23.52■■□□□ 1.36
HCG18-235ENST00000426882 SPG7Q9UQ90 795 aa23.52■■□□□ 1.36
HCG18-235ENST00000426882 DHX29Q7Z478 1369 aaKnown RBP23.52■■□□□ 1.36
HCG18-235ENST00000426882 WASLO00401 505 aaPredicted RBP23.51■■□□□ 1.35
HCG18-235ENST00000426882 NUP153P49790 1475 aaKnown RBP23.51■■□□□ 1.35
HCG18-235ENST00000426882 PDE4CQ08493 712 aa23.51■■□□□ 1.35
HCG18-235ENST00000426882 CCDC158Q5M9N0 1113 aa23.51■■□□□ 1.35
HCG18-235ENST00000426882 IGHDP01880 384 aa23.51■■□□□ 1.35
HCG18-235ENST00000426882 NUTM1Q86Y26 1132 aa23.51■■□□□ 1.35
HCG18-235ENST00000426882 FANCAO15360 1455 aa23.51■■□□□ 1.35
HCG18-235ENST00000426882 NSD2O96028 1365 aa23.51■■□□□ 1.35
HCG18-235ENST00000426882 XPCQ01831 940 aaPredicted RBP23.5■■□□□ 1.35
HCG18-235ENST00000426882 BLOC1S2Q6QNY1 142 aa23.5■■□□□ 1.35
HCG18-235ENST00000426882 LARP1BQ659C4 914 aaKnown RBP23.5■■□□□ 1.35
HCG18-235ENST00000426882 SART3Q15020 963 aaKnown RBP23.5■■□□□ 1.35
HCG18-235ENST00000426882 ATP10BO94823 1461 aa23.5■■□□□ 1.35
HCG18-235ENST00000426882 OLFM4Q6UX06 510 aa23.49■■□□□ 1.35
HCG18-235ENST00000426882 JAKMIP1Q96N16 626 aaKnown RBP23.49■■□□□ 1.35
HCG18-235ENST00000426882 CEP89Q96ST8 783 aa23.49■■□□□ 1.35
HCG18-235ENST00000426882 MX1P20591 662 aa23.49■■□□□ 1.35
HCG18-235ENST00000426882 TBC1D2Q9BYX2 928 aa23.49■■□□□ 1.35
HCG18-235ENST00000426882 ATP2B1P20020 1258 aa23.49■■□□□ 1.35
HCG18-235ENST00000426882 KRT85P78386 507 aa23.49■■□□□ 1.35
HCG18-235ENST00000426882 RAPGEF6Q8TEU7 1601 aa23.49■■□□□ 1.35
HCG18-235ENST00000426882 TTC39AQ5SRH9 613 aa23.48■■□□□ 1.35
HCG18-235ENST00000426882 RBM33Q96EV2 1170 aaKnown RBP23.48■■□□□ 1.35
HCG18-235ENST00000426882 ZNF396Q96N95 335 aaPredicted RBP23.48■■□□□ 1.35
HCG18-235ENST00000426882 XBP1P17861 261 aa23.48■■□□□ 1.35
HCG18-235ENST00000426882 TOM1L2Q6ZVM7 507 aa23.48■■□□□ 1.35
HCG18-235ENST00000426882 DDX54Q8TDD1 881 aaKnown RBP23.48■■□□□ 1.35
HCG18-235ENST00000426882 CNNM1Q9NRU3 951 aa23.48■■□□□ 1.35
HCG18-235ENST00000426882 F6X3S4 739 aa23.48■■□□□ 1.35
HCG18-235ENST00000426882 STK38Q15208 465 aa23.48■■□□□ 1.35
HCG18-235ENST00000426882 PDRG1Q9NUG6 133 aa23.48■■□□□ 1.35
HCG18-235ENST00000426882 GPS2Q13227 327 aa23.47■■□□□ 1.35
HCG18-235ENST00000426882 FMNL2Q96PY5 1086 aa23.47■■□□□ 1.35
HCG18-235ENST00000426882 TRIM34Q9BYJ4 488 aa23.47■■□□□ 1.35
HCG18-235ENST00000426882 KIF1BPQ96EK5 621 aa23.46■■□□□ 1.35
HCG18-235ENST00000426882 BRMS1Q9HCU9 246 aa23.46■■□□□ 1.35
HCG18-235ENST00000426882 PRAG1Q86YV5 1406 aa23.46■■□□□ 1.35
HCG18-235ENST00000426882 PARD3Q8TEW0 1356 aa23.46■■□□□ 1.35
HCG18-235ENST00000426882 UPF3BQ9BZI7 483 aaKnown RBP23.46■■□□□ 1.35
HCG18-235ENST00000426882 CCDC192P0DO97 292 aa23.45■■□□□ 1.35
HCG18-235ENST00000426882 CCDC70Q6NSX1 233 aa23.45■■□□□ 1.35
HCG18-235ENST00000426882 ZC3H6P61129 1189 aaKnown RBP23.45■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms