RNA–Protein interactions for RNA: ENST00000426870.1

LINC01953-201, Transcript of long intergenic non-protein coding RNA 1953, humanhuman

TSL 5 BASIC

Gene LINC01953, Length 717 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01953-201ENST00000426870 TRIM52Q96A61 297 aa11.92□□□□□ -0.5
LINC01953-201ENST00000426870 ZIC2O95409 532 aaPredicted RBP11.91□□□□□ -0.5
LINC01953-201ENST00000426870 NR1H3Q13133 447 aa11.91□□□□□ -0.5
LINC01953-201ENST00000426870 OCSTAMPQ9BR26 566 aa11.91□□□□□ -0.5
LINC01953-201ENST00000426870 PGPEP1Q9NXJ5 209 aa11.91□□□□□ -0.5
LINC01953-201ENST00000426870 DACH1Q9UI36 760 aa11.91□□□□□ -0.5
LINC01953-201ENST00000426870 PCDHB9Q9Y5E1 797 aa11.91□□□□□ -0.5
LINC01953-201ENST00000426870 NR3C2P08235 984 aa11.9□□□□□ -0.5
LINC01953-201ENST00000426870 TIMP2P16035 220 aa11.9□□□□□ -0.5
LINC01953-201ENST00000426870 MCCD1P59942 119 aaPredicted RBP11.9□□□□□ -0.5
LINC01953-201ENST00000426870 C11orf95C9JLR9 678 aaPredicted RBP11.89□□□□□ -0.51
LINC01953-201ENST00000426870 FBXO45P0C2W1 286 aa11.89□□□□□ -0.51
LINC01953-201ENST00000426870 KIFC2Q96AC6 838 aa11.89□□□□□ -0.51
LINC01953-201ENST00000426870 UPP2O95045 317 aa11.88□□□□□ -0.51
LINC01953-201ENST00000426870 SCARF1Q14162 830 aa11.88□□□□□ -0.51
LINC01953-201ENST00000426870 GMPR2Q9P2T1 348 aaKnown RBP11.88□□□□□ -0.51
LINC01953-201ENST00000426870 FLIIQ13045 1269 aa11.87□□□□□ -0.51
LINC01953-201ENST00000426870 ITPKCQ96DU7 683 aa11.87□□□□□ -0.51
LINC01953-201ENST00000426870 TBC1D2BQ9UPU7 963 aa11.87□□□□□ -0.51
LINC01953-201ENST00000426870 RAB15P59190 212 aa11.86□□□□□ -0.51
LINC01953-201ENST00000426870 MCM6Q14566 821 aa11.86□□□□□ -0.51
LINC01953-201ENST00000426870 PPP1R26Q5T8A7 1209 aaPredicted RBP11.86□□□□□ -0.51
LINC01953-201ENST00000426870 ZFAND3Q9H8U3 227 aa11.86□□□□□ -0.51
LINC01953-201ENST00000426870 INTS6LQ5JSJ4 861 aaKnown RBP11.85□□□□□ -0.51
LINC01953-201ENST00000426870 WWC1Q8IX03 1113 aa11.85□□□□□ -0.51
LINC01953-201ENST00000426870 KLF16Q9BXK1 252 aaPredicted RBP11.85□□□□□ -0.51
LINC01953-201ENST00000426870 BMP1P13497 986 aa11.84□□□□□ -0.51
LINC01953-201ENST00000426870 MRPL14Q6P1L8 145 aaKnown RBP11.84□□□□□ -0.51
LINC01953-201ENST00000426870 SEPT12Q8IYM1 358 aa11.84□□□□□ -0.51
LINC01953-201ENST00000426870 POTECB2RU33 542 aa11.83□□□□□ -0.52
LINC01953-201ENST00000426870 ABL2P42684 1182 aa11.83□□□□□ -0.52
LINC01953-201ENST00000426870 RNF20Q5VTR2 975 aa11.83□□□□□ -0.52
LINC01953-201ENST00000426870 CCDC125Q86Z20 511 aa11.83□□□□□ -0.52
LINC01953-201ENST00000426870 GDPD2Q9HCC8 539 aa11.83□□□□□ -0.52
LINC01953-201ENST00000426870 RAD21O60216 631 aa11.82□□□□□ -0.52
LINC01953-201ENST00000426870 EIF4G2P78344 907 aaKnown RBP eCLIP11.82□□□□□ -0.52
LINC01953-201ENST00000426870 TRIM47Q96LD4 638 aa11.82□□□□□ -0.52
LINC01953-201ENST00000426870 TRIM46Q7Z4K8 759 aa11.81□□□□□ -0.52
LINC01953-201ENST00000426870 WASHC4Q2M389 1173 aa11.8□□□□□ -0.52
LINC01953-201ENST00000426870 TSEN34Q9BSV6 310 aaKnown RBP11.8□□□□□ -0.52
LINC01953-201ENST00000426870 ESPNB1AK53 854 aa11.79□□□□□ -0.52
LINC01953-201ENST00000426870 MEIOBQ8N635 442 aa11.79□□□□□ -0.52
LINC01953-201ENST00000426870 ZFP42Q96MM3 310 aa11.79□□□□□ -0.52
LINC01953-201ENST00000426870 GPR37L1O60883 481 aa11.78□□□□□ -0.52
LINC01953-201ENST00000426870 GIGYF1O75420 1035 aaPredicted RBP11.78□□□□□ -0.52
LINC01953-201ENST00000426870 BMP2P12643 396 aa11.78□□□□□ -0.52
LINC01953-201ENST00000426870 UBTFP17480 764 aaKnown RBP11.78□□□□□ -0.52
LINC01953-201ENST00000426870 PURBQ96QR8 312 aaKnown RBP11.78□□□□□ -0.52
LINC01953-201ENST00000426870 C6orf118Q5T5N4 469 aa11.77□□□□□ -0.53
LINC01953-201ENST00000426870 ERVH48-1M5A8F1 160 aa11.76□□□□□ -0.53
LINC01953-201ENST00000426870 LINC00528Q8N1L1 170 aa11.76□□□□□ -0.53
LINC01953-201ENST00000426870 ESF1Q9H501 851 aaKnown RBP11.76□□□□□ -0.53
LINC01953-201ENST00000426870 SNRPBP14678 240 aaKnown RBP11.74□□□□□ -0.53
LINC01953-201ENST00000426870 CBLBQ13191 982 aa11.74□□□□□ -0.53
LINC01953-201ENST00000426870 IRF5Q13568 498 aa11.74□□□□□ -0.53
LINC01953-201ENST00000426870 ZNF784Q8NCA9 323 aaPredicted RBP11.74□□□□□ -0.53
LINC01953-201ENST00000426870 TMPRSS4Q9NRS4 437 aa11.74□□□□□ -0.53
LINC01953-201ENST00000426870 COG6Q9Y2V7 657 aa11.74□□□□□ -0.53
LINC01953-201ENST00000426870 VAC14Q08AM6 782 aa11.73□□□□□ -0.53
LINC01953-201ENST00000426870 Q6ZVU0 165 aa11.73□□□□□ -0.53
LINC01953-201ENST00000426870 SOX11P35716 441 aa11.71□□□□□ -0.53
LINC01953-201ENST00000426870 SEMA3FQ13275 785 aa11.71□□□□□ -0.53
LINC01953-201ENST00000426870 CEP126Q9P2H0 1117 aa11.71□□□□□ -0.53
LINC01953-201ENST00000426870 SLFNL1Q499Z3 407 aa11.7□□□□□ -0.54
LINC01953-201ENST00000426870 ZNF775Q96BV0 537 aaPredicted RBP11.7□□□□□ -0.54
LINC01953-201ENST00000426870 CYLDQ9NQC7 956 aa11.7□□□□□ -0.54
LINC01953-201ENST00000426870 PCDHB11Q9Y5F2 797 aa11.7□□□□□ -0.54
LINC01953-201ENST00000426870 MAN1A2O60476 641 aa11.69□□□□□ -0.54
LINC01953-201ENST00000426870 RELBQ01201 579 aa11.69□□□□□ -0.54
LINC01953-201ENST00000426870 ADH1AP07327 375 aa11.68□□□□□ -0.54
LINC01953-201ENST00000426870 CC2D2BQ6DHV5 1058 aa11.67□□□□□ -0.54
LINC01953-201ENST00000426870 AGBL1Q96MI9 1066 aa11.66□□□□□ -0.54
LINC01953-201ENST00000426870 SPINT1O43278 529 aa11.65□□□□□ -0.54
LINC01953-201ENST00000426870 LILRA1O75019 489 aa11.65□□□□□ -0.54
LINC01953-201ENST00000426870 MYCP01106 439 aaPredicted RBP11.65□□□□□ -0.54
LINC01953-201ENST00000426870 RNF135Q8IUD6 432 aa11.65□□□□□ -0.54
LINC01953-201ENST00000426870 POM121Q96HA1 1249 aa11.65□□□□□ -0.54
LINC01953-201ENST00000426870 TTLL8A6PVC2 850 aa11.64□□□□□ -0.55
LINC01953-201ENST00000426870 ADD1P35611 737 aaKnown RBP11.64□□□□□ -0.55
LINC01953-201ENST00000426870 POLMQ9NP87 494 aaPredicted RBP11.64□□□□□ -0.55
LINC01953-201ENST00000426870 ATP5J2-PTCD1G3V325 749 aa11.63□□□□□ -0.55
LINC01953-201ENST00000426870 PTGIRP43119 386 aa11.63□□□□□ -0.55
LINC01953-201ENST00000426870 ERVK-9P63128 1117 aa11.63□□□□□ -0.55
LINC01953-201ENST00000426870 CYP2U1Q7Z449 544 aa11.63□□□□□ -0.55
LINC01953-201ENST00000426870 ZNF395Q9H8N7 513 aaPredicted RBP11.63□□□□□ -0.55
LINC01953-201ENST00000426870 SOS2Q07890 1332 aaPredicted RBP11.62□□□□□ -0.55
LINC01953-201ENST00000426870 SLC16A10Q8TF71 515 aa11.62□□□□□ -0.55
LINC01953-201ENST00000426870 DOLKQ9UPQ8 538 aa11.62□□□□□ -0.55
LINC01953-201ENST00000426870 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.61□□□□□ -0.55
LINC01953-201ENST00000426870 SIRT1Q96EB6 747 aa11.61□□□□□ -0.55
LINC01953-201ENST00000426870 NXF1Q9UBU9 619 aaKnown RBP11.61□□□□□ -0.55
LINC01953-201ENST00000426870 INSM2Q96T92 566 aaPredicted RBP11.6□□□□□ -0.55
LINC01953-201ENST00000426870 SOBPA7XYQ1 873 aa11.59□□□□□ -0.55
LINC01953-201ENST00000426870 TERTO14746 1132 aaKnown RBP11.59□□□□□ -0.55
LINC01953-201ENST00000426870 USP4Q13107 963 aa11.59□□□□□ -0.55
LINC01953-201ENST00000426870 CCDC85AQ96PX6 553 aaPredicted RBP11.59□□□□□ -0.55
LINC01953-201ENST00000426870 FIGNL2A6NMB9 653 aa11.58□□□□□ -0.56
LINC01953-201ENST00000426870 WFS1O76024 890 aa11.58□□□□□ -0.56
LINC01953-201ENST00000426870 MAP7D1Q3KQU3 841 aa11.58□□□□□ -0.56
LINC01953-201ENST00000426870 NPAS3Q8IXF0 933 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms