RNA–Protein interactions for RNA: ENST00000426763.3

RPL28-202, Transcript of ribosomal protein L28, humanhuman

TSL 1 (best)

Gene RPL28, Length 5,620 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-202ENST00000426763 C1orf115Q9H7X2 142 aa16.84■□□□□ 0.29
RPL28-202ENST00000426763 ABCC11Q96J66 1382 aa16.84■□□□□ 0.29
RPL28-202ENST00000426763 MCTP1Q6DN14 999 aa16.84■□□□□ 0.29
RPL28-202ENST00000426763 USHBP1Q8N6Y0 703 aa16.83■□□□□ 0.29
RPL28-202ENST00000426763 CCDC184Q52MB2 194 aa16.83■□□□□ 0.29
RPL28-202ENST00000426763 GNL3LQ9NVN8 582 aaKnown RBP16.83■□□□□ 0.29
RPL28-202ENST00000426763 DDX11L8A8MPP1 907 aa16.83■□□□□ 0.28
RPL28-202ENST00000426763 MCM10Q7L590 875 aa16.83■□□□□ 0.28
RPL28-202ENST00000426763 CCDC158Q5M9N0 1113 aa16.83■□□□□ 0.28
RPL28-202ENST00000426763 NGLY1Q96IV0 654 aa16.83■□□□□ 0.28
RPL28-202ENST00000426763 HIP1O00291 1037 aa16.82■□□□□ 0.28
RPL28-202ENST00000426763 KIAA2012Q0VF49 1180 aa16.82■□□□□ 0.28
RPL28-202ENST00000426763 IFT57Q9NWB7 429 aa16.82■□□□□ 0.28
RPL28-202ENST00000426763 DNAJC2Q99543 621 aaKnown RBP16.82■□□□□ 0.28
RPL28-202ENST00000426763 DISP3Q9P2K9 1392 aa16.82■□□□□ 0.28
RPL28-202ENST00000426763 ZMYM3Q14202 1370 aa16.82■□□□□ 0.28
RPL28-202ENST00000426763 TAF7Q15545 349 aaPredicted RBP16.82■□□□□ 0.28
RPL28-202ENST00000426763 FYB1O15117 783 aa16.81■□□□□ 0.28
RPL28-202ENST00000426763 GLIPR1L2Q4G1C9 344 aa16.81■□□□□ 0.28
RPL28-202ENST00000426763 DCAF8L1A6NGE4 600 aa16.81■□□□□ 0.28
RPL28-202ENST00000426763 ANKRD36BQ8N2N9 1353 aa16.81■□□□□ 0.28
RPL28-202ENST00000426763 SLFN5Q08AF3 891 aa16.81■□□□□ 0.28
RPL28-202ENST00000426763 CCDC57Q2TAC2 916 aa16.81■□□□□ 0.28
RPL28-202ENST00000426763 MVPQ14764 893 aaKnown RBP16.81■□□□□ 0.28
RPL28-202ENST00000426763 TTC39AQ5SRH9 613 aa16.81■□□□□ 0.28
RPL28-202ENST00000426763 TTC21AQ8NDW8 1320 aa16.8■□□□□ 0.28
RPL28-202ENST00000426763 DUSP27Q5VZP5 1158 aa16.8■□□□□ 0.28
RPL28-202ENST00000426763 MPHOSPH8Q99549 860 aa16.8■□□□□ 0.28
RPL28-202ENST00000426763 RALGAPBQ86X10 1494 aa16.8■□□□□ 0.28
RPL28-202ENST00000426763 ATP10AO60312 1499 aa16.79■□□□□ 0.28
RPL28-202ENST00000426763 THUMPD2Q9BTF0 503 aaKnown RBP16.79■□□□□ 0.28
RPL28-202ENST00000426763 PDZRN3Q9UPQ7 1066 aa16.79■□□□□ 0.28
RPL28-202ENST00000426763 C22orf23Q9BZE7 217 aa16.79■□□□□ 0.28
RPL28-202ENST00000426763 LRRCC1Q9C099 1032 aa16.79■□□□□ 0.28
RPL28-202ENST00000426763 NPHP3Q7Z494 1330 aa16.79■□□□□ 0.28
RPL28-202ENST00000426763 MIS18AQ9NYP9 233 aa16.78■□□□□ 0.28
RPL28-202ENST00000426763 TOM1O60784 492 aa16.78■□□□□ 0.28
RPL28-202ENST00000426763 PTCD1O75127 700 aaKnown RBP16.78■□□□□ 0.28
RPL28-202ENST00000426763 PSMA5P28066 241 aa16.78■□□□□ 0.28
RPL28-202ENST00000426763 EXOC5O00471 708 aa16.78■□□□□ 0.28
RPL28-202ENST00000426763 TCEAL9Q9UHQ7 104 aa16.78■□□□□ 0.28
RPL28-202ENST00000426763 PRAG1Q86YV5 1406 aa16.78■□□□□ 0.28
RPL28-202ENST00000426763 PPP1R1BQ9UD71 204 aaPredicted RBP16.78■□□□□ 0.28
RPL28-202ENST00000426763 GOLGA6L3A6NEY3 463 aa16.77■□□□□ 0.28
RPL28-202ENST00000426763 DCTN1Q14203 1278 aa16.77■□□□□ 0.28
RPL28-202ENST00000426763 SIL1Q9H173 461 aa16.77■□□□□ 0.28
RPL28-202ENST00000426763 TARBP1Q13395 1621 aaKnown RBP16.77■□□□□ 0.28
RPL28-202ENST00000426763 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.77■□□□□ 0.27
RPL28-202ENST00000426763 SMC3Q9UQE7 1217 aa16.77■□□□□ 0.27
RPL28-202ENST00000426763 ZNF652Q9Y2D9 606 aa16.77■□□□□ 0.27
RPL28-202ENST00000426763 SLC4A3P48751 1232 aa16.76■□□□□ 0.27
RPL28-202ENST00000426763 ATP7AQ04656 1500 aa16.76■□□□□ 0.27
RPL28-202ENST00000426763 MPRIPQ6WCQ1 1025 aa16.76■□□□□ 0.27
RPL28-202ENST00000426763 NAP1L5Q96NT1 182 aaPredicted RBP16.76■□□□□ 0.27
RPL28-202ENST00000426763 PPIP5K1Q6PFW1 1433 aa16.76■□□□□ 0.27
RPL28-202ENST00000426763 DNMT1P26358 1616 aaKnown RBP16.75■□□□□ 0.27
RPL28-202ENST00000426763 SRGAP3O43295 1099 aa16.75■□□□□ 0.27
RPL28-202ENST00000426763 FOXD4L6Q3SYB3 417 aaPredicted RBP16.75■□□□□ 0.27
RPL28-202ENST00000426763 FOXD4L3Q6VB84 417 aaPredicted RBP16.75■□□□□ 0.27
RPL28-202ENST00000426763 CREBRFQ8IUR6 639 aa16.75■□□□□ 0.27
RPL28-202ENST00000426763 ANKRD24Q8TF21 1146 aa16.75■□□□□ 0.27
RPL28-202ENST00000426763 EIF2AK4Q9P2K8 1649 aaKnown RBP16.74■□□□□ 0.27
RPL28-202ENST00000426763 SLC3A2P08195 630 aaKnown RBP16.74■□□□□ 0.27
RPL28-202ENST00000426763 SART3Q15020 963 aaKnown RBP16.74■□□□□ 0.27
RPL28-202ENST00000426763 SAMD9Q5K651 1589 aa16.74■□□□□ 0.27
RPL28-202ENST00000426763 SAFBQ15424 915 aaKnown RBP eCLIP16.74■□□□□ 0.27
RPL28-202ENST00000426763 LARP1Q6PKG0 1096 aaKnown RBP16.74■□□□□ 0.27
RPL28-202ENST00000426763 IFNL2Q8IZJ0 200 aa16.74■□□□□ 0.27
RPL28-202ENST00000426763 SKOR2Q2VWA4 1001 aaPredicted RBP16.74■□□□□ 0.27
RPL28-202ENST00000426763 ALDH1L2Q3SY69 923 aa16.74■□□□□ 0.27
RPL28-202ENST00000426763 RPAP2Q8IXW5 612 aaPredicted RBP16.74■□□□□ 0.27
RPL28-202ENST00000426763 DDX49Q9Y6V7 483 aaKnown RBP16.74■□□□□ 0.27
RPL28-202ENST00000426763 BICDL1Q6ZP65 573 aa16.73■□□□□ 0.27
RPL28-202ENST00000426763 CEP126Q9P2H0 1117 aa16.73■□□□□ 0.27
RPL28-202ENST00000426763 UBAP1LF5GYI3 381 aa16.73■□□□□ 0.27
RPL28-202ENST00000426763 C19orf44Q9H6X5 657 aa16.72■□□□□ 0.27
RPL28-202ENST00000426763 NEO1Q92859 1461 aa16.72■□□□□ 0.27
RPL28-202ENST00000426763 ZPR1O75312 459 aa16.72■□□□□ 0.27
RPL28-202ENST00000426763 TPD52L1Q16890 204 aaPredicted RBP16.72■□□□□ 0.27
RPL28-202ENST00000426763 FMNL2Q96PY5 1086 aa16.72■□□□□ 0.27
RPL28-202ENST00000426763 VPS37CA5D8V6 355 aaPredicted RBP16.72■□□□□ 0.27
RPL28-202ENST00000426763 CWC22Q9HCG8 908 aaKnown RBP16.72■□□□□ 0.27
RPL28-202ENST00000426763 NCKAP5LQ9HCH0 1330 aa16.72■□□□□ 0.27
RPL28-202ENST00000426763 IGHMBP2P38935 993 aaKnown RBP16.71■□□□□ 0.27
RPL28-202ENST00000426763 DEKP35659 375 aaKnown RBP16.71■□□□□ 0.27
RPL28-202ENST00000426763 CHRNA2Q15822 529 aa16.71■□□□□ 0.27
RPL28-202ENST00000426763 PUS7Q96PZ0 661 aaKnown RBP16.71■□□□□ 0.27
RPL28-202ENST00000426763 HSPA2P54652 639 aa16.71■□□□□ 0.27
RPL28-202ENST00000426763 CHMP5Q9NZZ3 219 aa16.71■□□□□ 0.27
RPL28-202ENST00000426763 ZSCAN25Q6NSZ9 544 aa16.71■□□□□ 0.26
RPL28-202ENST00000426763 MAPKBP1O60336 1514 aa16.71■□□□□ 0.26
RPL28-202ENST00000426763 TBX22Q9Y458 520 aa16.7■□□□□ 0.26
RPL28-202ENST00000426763 AACSQ86V21 672 aa16.7■□□□□ 0.26
RPL28-202ENST00000426763 NUCB2P80303 420 aa16.7■□□□□ 0.26
RPL28-202ENST00000426763 CCDC47Q96A33 483 aaKnown RBP16.7■□□□□ 0.26
RPL28-202ENST00000426763 TMEM57Q8N5G2 664 aa16.7■□□□□ 0.26
RPL28-202ENST00000426763 HSP90AB3PQ58FF7 597 aa16.69■□□□□ 0.26
RPL28-202ENST00000426763 XBP1P17861 261 aa16.69■□□□□ 0.26
RPL28-202ENST00000426763 SAMD1Q6SPF0 538 aaPredicted RBP16.69■□□□□ 0.26
RPL28-202ENST00000426763 FANCIQ9NVI1 1328 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms