RNA–Protein interactions for RNA: ENST00000425989.5

HDLBP-211, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-211ENST00000425989 PHRF1Q9P1Y6 1649 aaKnown RBP12.6□□□□□ -0.39
HDLBP-211ENST00000425989 E9PSI1 815 aa12.6□□□□□ -0.39
HDLBP-211ENST00000425989 CALD1Q05682 793 aaKnown RBP12.6□□□□□ -0.39
HDLBP-211ENST00000425989 LMOD3Q0VAK6 560 aa12.6□□□□□ -0.39
HDLBP-211ENST00000425989 NUTM2GQ5VZR2 741 aa12.6□□□□□ -0.39
HDLBP-211ENST00000425989 WWC1Q8IX03 1113 aa12.6□□□□□ -0.39
HDLBP-211ENST00000425989 CCDC146Q8IYE0 955 aa12.6□□□□□ -0.39
HDLBP-211ENST00000425989 LRRC59Q96AG4 307 aaKnown RBP12.6□□□□□ -0.39
HDLBP-211ENST00000425989 RSPH6AQ9H0K4 717 aa12.6□□□□□ -0.39
HDLBP-211ENST00000425989 SLIT3O75094 1523 aa12.6□□□□□ -0.39
HDLBP-211ENST00000425989 MARF1Q9Y4F3 1742 aaKnown RBP12.59□□□□□ -0.39
HDLBP-211ENST00000425989 TMPOP42166 694 aaKnown RBP12.59□□□□□ -0.39
HDLBP-211ENST00000425989 TNS3Q68CZ2 1445 aa12.59□□□□□ -0.39
HDLBP-211ENST00000425989 IQSEC2Q5JU85 1478 aa12.59□□□□□ -0.39
HDLBP-211ENST00000425989 PXDNQ92626 1479 aa12.59□□□□□ -0.39
HDLBP-211ENST00000425989 XPCQ01831 940 aaPredicted RBP12.58□□□□□ -0.4
HDLBP-211ENST00000425989 SLFN5Q08AF3 891 aa12.58□□□□□ -0.4
HDLBP-211ENST00000425989 TRMT2AQ8IZ69 625 aaKnown RBP12.58□□□□□ -0.4
HDLBP-211ENST00000425989 IL16Q14005 1332 aa12.58□□□□□ -0.4
HDLBP-211ENST00000425989 SOX12O15370 315 aa12.57□□□□□ -0.4
HDLBP-211ENST00000425989 PRKAR2BP31323 418 aa12.57□□□□□ -0.4
HDLBP-211ENST00000425989 RIPK4P57078 832 aa12.57□□□□□ -0.4
HDLBP-211ENST00000425989 NFE2L2Q16236 605 aa12.57□□□□□ -0.4
HDLBP-211ENST00000425989 ERICH6BQ5W0A0 696 aa12.57□□□□□ -0.4
HDLBP-211ENST00000425989 SALL2Q9Y467 1007 aaPredicted RBP12.57□□□□□ -0.4
HDLBP-211ENST00000425989 NFAT5O94916 1531 aa12.57□□□□□ -0.4
HDLBP-211ENST00000425989 LTN1O94822 1766 aa12.56□□□□□ -0.4
HDLBP-211ENST00000425989 HTATSF1O43719 755 aaKnown RBP12.56□□□□□ -0.4
HDLBP-211ENST00000425989 NEFLP07196 543 aa12.56□□□□□ -0.4
HDLBP-211ENST00000425989 SULT6B1Q6IMI4 303 aa12.56□□□□□ -0.4
HDLBP-211ENST00000425989 EYA1Q99502 592 aa12.56□□□□□ -0.4
HDLBP-211ENST00000425989 MYH16Q9H6N6 1097 aa12.56□□□□□ -0.4
HDLBP-211ENST00000425989 ABCC6O95255 1503 aa12.56□□□□□ -0.4
HDLBP-211ENST00000425989 IGSF1Q8N6C5 1336 aa12.56□□□□□ -0.4
HDLBP-211ENST00000425989 CPDO75976 1380 aa12.56□□□□□ -0.4
HDLBP-211ENST00000425989 PEAK1Q9H792 1746 aa12.55□□□□□ -0.4
HDLBP-211ENST00000425989 KDRP35968 1356 aa12.55□□□□□ -0.4
HDLBP-211ENST00000425989 HMOX1P09601 288 aa12.54□□□□□ -0.4
HDLBP-211ENST00000425989 CT47B1P0C2W7 299 aaPredicted RBP12.54□□□□□ -0.4
HDLBP-211ENST00000425989 GAS2L2Q8NHY3 880 aa12.54□□□□□ -0.4
HDLBP-211ENST00000425989 NHSL1Q5SYE7 1610 aa12.54□□□□□ -0.4
HDLBP-211ENST00000425989 PLEKHG2Q9H7P9 1386 aa12.54□□□□□ -0.4
HDLBP-211ENST00000425989 MED1Q15648 1581 aaPredicted RBP12.53□□□□□ -0.4
HDLBP-211ENST00000425989 NEUROD2Q15784 382 aa12.53□□□□□ -0.4
HDLBP-211ENST00000425989 DDX17Q92841 729 aaKnown RBP12.53□□□□□ -0.4
HDLBP-211ENST00000425989 RGPD1P0DJD0 1748 aa12.53□□□□□ -0.4
HDLBP-211ENST00000425989 AMOTQ4VCS5 1084 aa12.52□□□□□ -0.41
HDLBP-211ENST00000425989 DUSP27Q5VZP5 1158 aa12.52□□□□□ -0.41
HDLBP-211ENST00000425989 TRIM35Q9UPQ4 493 aa12.52□□□□□ -0.41
HDLBP-211ENST00000425989 SUPT16HQ9Y5B9 1047 aaKnown RBP12.52□□□□□ -0.41
HDLBP-211ENST00000425989 HAP1P54257 671 aaPredicted RBP12.51□□□□□ -0.41
HDLBP-211ENST00000425989 ZC3H6P61129 1189 aaKnown RBP12.51□□□□□ -0.41
HDLBP-211ENST00000425989 CDCA7LQ96GN5 454 aa12.51□□□□□ -0.41
HDLBP-211ENST00000425989 PHACTR3Q96KR7 559 aa12.51□□□□□ -0.41
HDLBP-211ENST00000425989 RCAN3Q9UKA8 241 aa12.51□□□□□ -0.41
HDLBP-211ENST00000425989 GTF3C3Q9Y5Q9 886 aa12.51□□□□□ -0.41
HDLBP-211ENST00000425989 AHDC1Q5TGY3 1603 aaPredicted RBP12.51□□□□□ -0.41
HDLBP-211ENST00000425989 GNAI1P63096 354 aa12.5□□□□□ -0.41
HDLBP-211ENST00000425989 ANKRD24Q8TF21 1146 aa12.5□□□□□ -0.41
HDLBP-211ENST00000425989 RNF123Q5XPI4 1314 aa12.5□□□□□ -0.41
HDLBP-211ENST00000425989 PLEKHO1Q53GL0 409 aaPredicted RBP12.49□□□□□ -0.41
HDLBP-211ENST00000425989 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.49□□□□□ -0.41
HDLBP-211ENST00000425989 RTF1Q92541 710 aaKnown RBP12.49□□□□□ -0.41
HDLBP-211ENST00000425989 ZNF428Q96B54 188 aa12.49□□□□□ -0.41
HDLBP-211ENST00000425989 BABAM1Q9NWV8 329 aa12.49□□□□□ -0.41
HDLBP-211ENST00000425989 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.49□□□□□ -0.412e-15■□□□□ 9.8
HDLBP-211ENST00000425989 RRP7AQ9Y3A4 280 aaKnown RBP12.49□□□□□ -0.41
HDLBP-211ENST00000425989 ROBO1Q9Y6N7 1651 aa12.48□□□□□ -0.41
HDLBP-211ENST00000425989 NBPF6Q5VWK0 638 aa12.48□□□□□ -0.41
HDLBP-211ENST00000425989 LTV1Q96GA3 475 aaPredicted RBP12.48□□□□□ -0.41
HDLBP-211ENST00000425989 NBPF4Q96M43 638 aa12.48□□□□□ -0.41
HDLBP-211ENST00000425989 IFT57Q9NWB7 429 aa12.48□□□□□ -0.41
HDLBP-211ENST00000425989 ZBTB7CA1YPR0 619 aa12.47□□□□□ -0.41
HDLBP-211ENST00000425989 UBAP1LF5GYI3 381 aa12.47□□□□□ -0.41
HDLBP-211ENST00000425989 CFAP44Q96MT7 982 aa12.47□□□□□ -0.41
HDLBP-211ENST00000425989 PRDM11Q9NQV5 511 aa12.47□□□□□ -0.41
HDLBP-211ENST00000425989 AXIN2Q9Y2T1 843 aa12.47□□□□□ -0.41
HDLBP-211ENST00000425989 COL18A1P39060 1754 aa12.47□□□□□ -0.41
HDLBP-211ENST00000425989 CRYBG1Q9Y4K1 1723 aa12.47□□□□□ -0.41
HDLBP-211ENST00000425989 DLG5Q8TDM6 1919 aa12.47□□□□□ -0.41
HDLBP-211ENST00000425989 NCAPD2Q15021 1401 aa12.46□□□□□ -0.41
HDLBP-211ENST00000425989 ERBB3P21860 1342 aa12.46□□□□□ -0.41
HDLBP-211ENST00000425989 FAM208AQ9UK61 1670 aaKnown RBP12.46□□□□□ -0.41
HDLBP-211ENST00000425989 GNAT3A8MTJ3 354 aa12.46□□□□□ -0.41
HDLBP-211ENST00000425989 AEBP1Q8IUX7 1158 aa12.46□□□□□ -0.41
HDLBP-211ENST00000425989 CABLES1Q8TDN4 633 aa12.46□□□□□ -0.41
HDLBP-211ENST00000425989 CHMP4AQ9BY43 222 aa12.46□□□□□ -0.41
HDLBP-211ENST00000425989 KIAA0232Q92628 1395 aa12.45□□□□□ -0.42
HDLBP-211ENST00000425989 EVA1CP58658 441 aa12.45□□□□□ -0.42
HDLBP-211ENST00000425989 MTHFSDQ2M296 383 aaKnown RBP12.45□□□□□ -0.42
HDLBP-211ENST00000425989 RGPD5Q99666 1765 aa12.45□□□□□ -0.42
HDLBP-211ENST00000425989 SENP3-EIF4A1A0A087X0R7 540 aa12.44□□□□□ -0.42
HDLBP-211ENST00000425989 ZNF853P0CG23 659 aa12.44□□□□□ -0.42
HDLBP-211ENST00000425989 CSB-PGBD3P0DP91 1061 aa12.44□□□□□ -0.42
HDLBP-211ENST00000425989 AKAP4Q5JQC9 854 aa12.44□□□□□ -0.42
HDLBP-211ENST00000425989 RAPGEF4Q8WZA2 1011 aa12.44□□□□□ -0.42
HDLBP-211ENST00000425989 COL22A1Q8NFW1 1626 aaPredicted RBP12.44□□□□□ -0.42
HDLBP-211ENST00000425989 TATP17735 454 aaPredicted RBP12.43□□□□□ -0.42
HDLBP-211ENST00000425989 CARD10Q9BWT7 1032 aa12.43□□□□□ -0.42
HDLBP-211ENST00000425989 SPINK5Q9NQ38 1064 aaPredicted RBP12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms