RNA–Protein interactions for RNA: ENST00000424922.5

CALD1-206, Transcript of caldesmon 1, humanhuman

TSL 1 (best) BASIC

Gene CALD1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-206ENST00000424922 SPATA31A3Q5VYP0 1347 aa19.76■□□□□ 0.75
CALD1-206ENST00000424922 MED1Q15648 1581 aaPredicted RBP19.75■□□□□ 0.75
CALD1-206ENST00000424922 ROBO1Q9Y6N7 1651 aa19.75■□□□□ 0.75
CALD1-206ENST00000424922 RNF123Q5XPI4 1314 aa19.75■□□□□ 0.75
CALD1-206ENST00000424922 SOS2Q07890 1332 aaPredicted RBP19.74■□□□□ 0.75
CALD1-206ENST00000424922 KIF24Q5T7B8 1368 aa19.74■□□□□ 0.75
CALD1-206ENST00000424922 PHRF1Q9P1Y6 1649 aaKnown RBP19.73■□□□□ 0.75
CALD1-206ENST00000424922 HMOX1P09601 288 aa19.73■□□□□ 0.75
CALD1-206ENST00000424922 HOXC9P31274 260 aa19.73■□□□□ 0.75
CALD1-206ENST00000424922 ZBTB7CA1YPR0 619 aa19.73■□□□□ 0.75
CALD1-206ENST00000424922 TCP11L2Q8N4U5 519 aa19.73■□□□□ 0.75
CALD1-206ENST00000424922 PLEKHF1Q96S99 279 aa19.73■□□□□ 0.75
CALD1-206ENST00000424922 RGPD1P0DJD0 1748 aa19.73■□□□□ 0.75
CALD1-206ENST00000424922 IQSEC2Q5JU85 1478 aa19.72■□□□□ 0.75
CALD1-206ENST00000424922 FCHSD2O94868 740 aa19.72■□□□□ 0.75
CALD1-206ENST00000424922 CRYBG1Q9Y4K1 1723 aa19.72■□□□□ 0.75
CALD1-206ENST00000424922 ARHGEF10O15013 1369 aa19.72■□□□□ 0.75
CALD1-206ENST00000424922 NEUROD2Q15784 382 aa19.71■□□□□ 0.75
CALD1-206ENST00000424922 RSPH6AQ9H0K4 717 aa19.71■□□□□ 0.75
CALD1-206ENST00000424922 PNNQ9H307 717 aaKnown RBP19.71■□□□□ 0.75
CALD1-206ENST00000424922 RRP7AQ9Y3A4 280 aaKnown RBP19.71■□□□□ 0.75
CALD1-206ENST00000424922 RTL1A6NKG5 1358 aa19.71■□□□□ 0.75
CALD1-206ENST00000424922 RGPD5Q99666 1765 aa19.7■□□□□ 0.74
CALD1-206ENST00000424922 IRX6P78412 446 aaPredicted RBP19.7■□□□□ 0.74
CALD1-206ENST00000424922 CABLES1Q8TDN4 633 aa19.7■□□□□ 0.74
CALD1-206ENST00000424922 PRKAR2BP31323 418 aa19.7■□□□□ 0.74
CALD1-206ENST00000424922 MAPK8IP3Q9UPT6 1336 aa19.69■□□□□ 0.74
CALD1-206ENST00000424922 ARHGEF25Q86VW2 580 aa19.69■□□□□ 0.74
CALD1-206ENST00000424922 IP6K1Q92551 441 aa19.69■□□□□ 0.74
CALD1-206ENST00000424922 PDE3BQ13370 1112 aa19.69■□□□□ 0.74
CALD1-206ENST00000424922 ZC3H6P61129 1189 aaKnown RBP19.68■□□□□ 0.74
CALD1-206ENST00000424922 NGEFQ8N5V2 710 aa19.68■□□□□ 0.74
CALD1-206ENST00000424922 CDCA7LQ96GN5 454 aa19.68■□□□□ 0.74
CALD1-206ENST00000424922 ZNF521Q96K83 1311 aa19.68■□□□□ 0.74
CALD1-206ENST00000424922 LTV1Q96GA3 475 aaPredicted RBP19.67■□□□□ 0.74
CALD1-206ENST00000424922 RGPD2P0DJD1 1756 aa19.67■□□□□ 0.74
CALD1-206ENST00000424922 SULT6B1Q6IMI4 303 aa19.67■□□□□ 0.74
CALD1-206ENST00000424922 AEBP1Q8IUX7 1158 aa19.66■□□□□ 0.74
CALD1-206ENST00000424922 NEFMP07197 916 aa19.66■□□□□ 0.74
CALD1-206ENST00000424922 DLG5Q8TDM6 1919 aa19.65■□□□□ 0.74
CALD1-206ENST00000424922 EYA1Q99502 592 aa19.65■□□□□ 0.74
CALD1-206ENST00000424922 ABCA3Q99758 1704 aa19.65■□□□□ 0.74
CALD1-206ENST00000424922 AHDC1Q5TGY3 1603 aaPredicted RBP19.65■□□□□ 0.74
CALD1-206ENST00000424922 TMPOP42166 694 aaKnown RBP19.64■□□□□ 0.74
CALD1-206ENST00000424922 WWC1Q8IX03 1113 aa19.64■□□□□ 0.74
CALD1-206ENST00000424922 PHACTR3Q96KR7 559 aa19.64■□□□□ 0.74
CALD1-206ENST00000424922 TOM1O60784 492 aa19.64■□□□□ 0.73
CALD1-206ENST00000424922 GOLGA2Q08379 1002 aa19.63■□□□□ 0.73
CALD1-206ENST00000424922 IGSF1Q8N6C5 1336 aa19.62■□□□□ 0.73
CALD1-206ENST00000424922 COL18A1P39060 1754 aa19.62■□□□□ 0.73
CALD1-206ENST00000424922 PHLPP1O60346 1717 aa19.62■□□□□ 0.73
CALD1-206ENST00000424922 PIP4K2BP78356 416 aa19.61■□□□□ 0.73
CALD1-206ENST00000424922 PHF23Q9BUL5 403 aaPredicted RBP19.61■□□□□ 0.73
CALD1-206ENST00000424922 AXIN2Q9Y2T1 843 aa19.61■□□□□ 0.73
CALD1-206ENST00000424922 RIPK4P57078 832 aa19.61■□□□□ 0.73
CALD1-206ENST00000424922 CCDC27Q2M243 656 aa19.61■□□□□ 0.73
CALD1-206ENST00000424922 ANP32EQ9BTT0 268 aa19.61■□□□□ 0.73
CALD1-206ENST00000424922 NCBP3Q53F19 620 aaKnown RBP19.6■□□□□ 0.73
CALD1-206ENST00000424922 LRRC59Q96AG4 307 aaKnown RBP19.6■□□□□ 0.73
CALD1-206ENST00000424922 KDRP35968 1356 aa19.6■□□□□ 0.73
CALD1-206ENST00000424922 UBAP1LF5GYI3 381 aa19.59■□□□□ 0.73
CALD1-206ENST00000424922 HAP1P54257 671 aaPredicted RBP19.59■□□□□ 0.73
CALD1-206ENST00000424922 KIAA0232Q92628 1395 aa19.59■□□□□ 0.73
CALD1-206ENST00000424922 NFE2L2Q16236 605 aa19.58■□□□□ 0.73
CALD1-206ENST00000424922 SPINK5Q9NQ38 1064 aaPredicted RBP19.58■□□□□ 0.73
CALD1-206ENST00000424922 SLFN5Q08AF3 891 aa19.58■□□□□ 0.72
CALD1-206ENST00000424922 CHRNA2Q15822 529 aa19.58■□□□□ 0.72
CALD1-206ENST00000424922 ANKRD24Q8TF21 1146 aa19.58■□□□□ 0.72
CALD1-206ENST00000424922 TRIM35Q9UPQ4 493 aa19.58■□□□□ 0.72
CALD1-206ENST00000424922 CPDO75976 1380 aa19.57■□□□□ 0.72
CALD1-206ENST00000424922 NBPF6Q5VWK0 638 aa19.57■□□□□ 0.72
CALD1-206ENST00000424922 USHBP1Q8N6Y0 703 aa19.57■□□□□ 0.72
CALD1-206ENST00000424922 NBPF4Q96M43 638 aa19.57■□□□□ 0.72
CALD1-206ENST00000424922 WDR63Q8IWG1 891 aa19.56■□□□□ 0.72
CALD1-206ENST00000424922 COL16A1Q07092 1604 aaPredicted RBP19.56■□□□□ 0.72
CALD1-206ENST00000424922 DUSP27Q5VZP5 1158 aa19.55■□□□□ 0.72
CALD1-206ENST00000424922 ABCC6O95255 1503 aa19.55■□□□□ 0.72
CALD1-206ENST00000424922 E9PSI1 815 aa19.55■□□□□ 0.72
CALD1-206ENST00000424922 ERBB3P21860 1342 aa19.54■□□□□ 0.72
CALD1-206ENST00000424922 TRMT2AQ8IZ69 625 aaKnown RBP19.54■□□□□ 0.72
CALD1-206ENST00000424922 CERKQ8TCT0 537 aa19.54■□□□□ 0.72
CALD1-206ENST00000424922 PRDM11Q9NQV5 511 aa19.54■□□□□ 0.72
CALD1-206ENST00000424922 RBM19Q9Y4C8 960 aaKnown RBP19.54■□□□□ 0.72
CALD1-206ENST00000424922 COL22A1Q8NFW1 1626 aaPredicted RBP19.53■□□□□ 0.72
CALD1-206ENST00000424922 CAMTA1Q9Y6Y1 1673 aa19.52■□□□□ 0.72
CALD1-206ENST00000424922 FAM208AQ9UK61 1670 aaKnown RBP19.52■□□□□ 0.71
CALD1-206ENST00000424922 LMO7Q8WWI1 1683 aa19.51■□□□□ 0.71
CALD1-206ENST00000424922 B4GALNT3Q6L9W6 998 aa19.51■□□□□ 0.71
CALD1-206ENST00000424922 RCAN3Q9UKA8 241 aa19.51■□□□□ 0.71
CALD1-206ENST00000424922 MTHFSDQ2M296 383 aaKnown RBP19.5■□□□□ 0.71
CALD1-206ENST00000424922 RRP1P56182 461 aaKnown RBP19.49■□□□□ 0.71
CALD1-206ENST00000424922 CSB-PGBD3P0DP91 1061 aa19.49■□□□□ 0.71
CALD1-206ENST00000424922 LMOD3Q0VAK6 560 aa19.49■□□□□ 0.71
CALD1-206ENST00000424922 FAM83GA6ND36 823 aa19.48■□□□□ 0.71
CALD1-206ENST00000424922 NCAPD2Q15021 1401 aa19.48■□□□□ 0.71
CALD1-206ENST00000424922 THUMPD2Q9BTF0 503 aaKnown RBP19.48■□□□□ 0.71
CALD1-206ENST00000424922 NLRP2Q9NX02 1062 aa19.48■□□□□ 0.71
CALD1-206ENST00000424922 DCTN1Q14203 1278 aa19.46■□□□□ 0.71
CALD1-206ENST00000424922 GAS2L2Q8NHY3 880 aa19.46■□□□□ 0.71
CALD1-206ENST00000424922 MYH16Q9H6N6 1097 aa19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms