RNA–Protein interactions for RNA: ENST00000424894.1

PRDM1-204, Transcript of PR/SET domain 1, humanhuman

TSL 5

Gene PRDM1, Length 583 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM1-204ENST00000424894 TMF1P82094 1093 aa9.98□□□□□ -0.81
PRDM1-204ENST00000424894 HDGFL2Q7Z4V5 671 aaPredicted RBP9.98□□□□□ -0.81
PRDM1-204ENST00000424894 TTC21AQ8NDW8 1320 aa9.98□□□□□ -0.81
PRDM1-204ENST00000424894 SHANK3Q9BYB0 1731 aa9.97□□□□□ -0.81
PRDM1-204ENST00000424894 EVA1CP58658 441 aa9.97□□□□□ -0.81
PRDM1-204ENST00000424894 ZNF692Q9BU19 519 aaPredicted RBP9.97□□□□□ -0.81
PRDM1-204ENST00000424894 CARD14Q9BXL6 1004 aa9.97□□□□□ -0.81
PRDM1-204ENST00000424894 GGNBP2Q9H3C7 697 aa9.97□□□□□ -0.81
PRDM1-204ENST00000424894 MAP2P11137 1827 aaKnown RBP9.97□□□□□ -0.81
PRDM1-204ENST00000424894 ANKRD36BQ8N2N9 1353 aa9.97□□□□□ -0.81
PRDM1-204ENST00000424894 FAM208AQ9UK61 1670 aaKnown RBP9.96□□□□□ -0.81
PRDM1-204ENST00000424894 DEFB132Q7Z7B7 95 aa9.96□□□□□ -0.82
PRDM1-204ENST00000424894 ARHGEF25Q86VW2 580 aa9.96□□□□□ -0.82
PRDM1-204ENST00000424894 TERF2IPQ9NYB0 399 aa9.96□□□□□ -0.82
PRDM1-204ENST00000424894 BRD4O60885 1362 aaPredicted RBP9.96□□□□□ -0.82
PRDM1-204ENST00000424894 USP31Q70CQ4 1352 aa9.96□□□□□ -0.82
PRDM1-204ENST00000424894 NSD3Q9BZ95 1437 aa9.96□□□□□ -0.82
PRDM1-204ENST00000424894 ONECUT3O60422 494 aaPredicted RBP9.95□□□□□ -0.82
PRDM1-204ENST00000424894 KRT27Q7Z3Y8 459 aa9.95□□□□□ -0.82
PRDM1-204ENST00000424894 TIMELESSQ9UNS1 1208 aa9.95□□□□□ -0.82
PRDM1-204ENST00000424894 AATKQ6ZMQ8 1374 aa9.95□□□□□ -0.82
PRDM1-204ENST00000424894 CRB1P82279 1406 aa9.95□□□□□ -0.82
PRDM1-204ENST00000424894 RRS1Q15050 365 aaKnown RBP9.94□□□□□ -0.82
PRDM1-204ENST00000424894 LTV1Q96GA3 475 aaPredicted RBP9.94□□□□□ -0.82
PRDM1-204ENST00000424894 EIF4G2P78344 907 aaKnown RBP eCLIP9.93□□□□□ -0.82
PRDM1-204ENST00000424894 TOM1L2Q6ZVM7 507 aa9.93□□□□□ -0.82
PRDM1-204ENST00000424894 NUP188Q5SRE5 1749 aa9.93□□□□□ -0.82
PRDM1-204ENST00000424894 WDR17Q8IZU2 1322 aa9.92□□□□□ -0.82
PRDM1-204ENST00000424894 FYB1O15117 783 aa9.92□□□□□ -0.82
PRDM1-204ENST00000424894 CSB-PGBD3P0DP91 1061 aa9.92□□□□□ -0.82
PRDM1-204ENST00000424894 PTF1AQ7RTS3 328 aa9.92□□□□□ -0.82
PRDM1-204ENST00000424894 RREB1Q92766 1687 aa9.92□□□□□ -0.82
PRDM1-204ENST00000424894 NINLQ9Y2I6 1382 aa9.91□□□□□ -0.82
PRDM1-204ENST00000424894 DOT1LQ8TEK3 1739 aa9.91□□□□□ -0.82
PRDM1-204ENST00000424894 MAP3K19Q56UN5 1328 aa9.91□□□□□ -0.82
PRDM1-204ENST00000424894 TCP11L2Q8N4U5 519 aa9.91□□□□□ -0.82
PRDM1-204ENST00000424894 USHBP1Q8N6Y0 703 aa9.91□□□□□ -0.82
PRDM1-204ENST00000424894 KCNH5Q8NCM2 988 aa9.91□□□□□ -0.82
PRDM1-204ENST00000424894 ANKRD24Q8TF21 1146 aa9.91□□□□□ -0.82
PRDM1-204ENST00000424894 COG3Q96JB2 828 aa9.91□□□□□ -0.82
PRDM1-204ENST00000424894 PUS7Q96PZ0 661 aaKnown RBP9.91□□□□□ -0.82
PRDM1-204ENST00000424894 SRCAPQ6ZRS2 3230 aa9.91□□□□□ -0.82
PRDM1-204ENST00000424894 ABCC6O95255 1503 aa9.91□□□□□ -0.82
PRDM1-204ENST00000424894 DISP2A7MBM2 1401 aa9.9□□□□□ -0.82
PRDM1-204ENST00000424894 BLMP54132 1417 aaPredicted RBP9.9□□□□□ -0.82
PRDM1-204ENST00000424894 TRIM37O94972 964 aa9.9□□□□□ -0.82
PRDM1-204ENST00000424894 TNNT2P45379 298 aaPredicted RBP9.9□□□□□ -0.82
PRDM1-204ENST00000424894 CNGB1Q14028 1251 aaPredicted RBP9.9□□□□□ -0.82
PRDM1-204ENST00000424894 EMILIN1Q9Y6C2 1016 aa9.9□□□□□ -0.82
PRDM1-204ENST00000424894 ERBB3P21860 1342 aa9.89□□□□□ -0.83
PRDM1-204ENST00000424894 KIF7Q2M1P5 1343 aa9.89□□□□□ -0.83
PRDM1-204ENST00000424894 NLRP2Q9NX02 1062 aa9.89□□□□□ -0.83
PRDM1-204ENST00000424894 BTAF1O14981 1849 aa9.89□□□□□ -0.83
PRDM1-204ENST00000424894 NHSQ6T4R5 1651 aa9.88□□□□□ -0.83
PRDM1-204ENST00000424894 HOXC9P31274 260 aa9.88□□□□□ -0.83
PRDM1-204ENST00000424894 EN1Q05925 392 aaPredicted RBP9.88□□□□□ -0.83
PRDM1-204ENST00000424894 BARGINQ6ZT62 677 aa9.88□□□□□ -0.83
PRDM1-204ENST00000424894 MARCH10Q8NA82 808 aaPredicted RBP9.88□□□□□ -0.83
PRDM1-204ENST00000424894 PANK3Q9H999 370 aa9.88□□□□□ -0.83
PRDM1-204ENST00000424894 TOGARAM1Q9Y4F4 1720 aa9.87□□□□□ -0.83
PRDM1-204ENST00000424894 KAT6BQ8WYB5 2073 aa9.87□□□□□ -0.83
PRDM1-204ENST00000424894 MEGF6O75095 1541 aa9.87□□□□□ -0.83
PRDM1-204ENST00000424894 HSP90AB2PQ58FF8 381 aa9.87□□□□□ -0.83
PRDM1-204ENST00000424894 PSDA5PKW4 1024 aaPredicted RBP9.86□□□□□ -0.83
PRDM1-204ENST00000424894 PPM1GO15355 546 aaPredicted RBP9.86□□□□□ -0.83
PRDM1-204ENST00000424894 AMPHP49418 695 aa9.86□□□□□ -0.83
PRDM1-204ENST00000424894 PDE3BQ13370 1112 aa9.86□□□□□ -0.83
PRDM1-204ENST00000424894 EZH2Q15910 746 aaKnown RBP9.86□□□□□ -0.83
PRDM1-204ENST00000424894 CDCA8Q53HL2 280 aa9.86□□□□□ -0.83
PRDM1-204ENST00000424894 TNS2Q63HR2 1409 aa9.86□□□□□ -0.83
PRDM1-204ENST00000424894 IP6K1Q92551 441 aa9.86□□□□□ -0.83
PRDM1-204ENST00000424894 CARD10Q9BWT7 1032 aa9.86□□□□□ -0.83
PRDM1-204ENST00000424894 DDB1Q16531 1140 aa9.85□□□□□ -0.83
PRDM1-204ENST00000424894 ACSBG1Q96GR2 724 aa9.85□□□□□ -0.83
PRDM1-204ENST00000424894 WASHC2AQ641Q2 1341 aa9.84□□□□□ -0.83
PRDM1-204ENST00000424894 ITGB4P16144 1822 aa9.84□□□□□ -0.83
PRDM1-204ENST00000424894 VIRMAQ69YN4 1812 aaKnown RBP9.84□□□□□ -0.83
PRDM1-204ENST00000424894 OVOS2A0A0G2JMS6 1433 aa9.84□□□□□ -0.83
PRDM1-204ENST00000424894 KCNQ2O43526 872 aa9.84□□□□□ -0.83
PRDM1-204ENST00000424894 NBPF6Q5VWK0 638 aa9.84□□□□□ -0.83
PRDM1-204ENST00000424894 NBPF4Q96M43 638 aa9.84□□□□□ -0.83
PRDM1-204ENST00000424894 THRAP3Q9Y2W1 955 aaKnown RBP9.84□□□□□ -0.83
PRDM1-204ENST00000424894 PKD1L3Q7Z443 1732 aa9.84□□□□□ -0.83
PRDM1-204ENST00000424894 TUBGCP6Q96RT7 1819 aa9.84□□□□□ -0.83
PRDM1-204ENST00000424894 APBA3O96018 575 aa9.83□□□□□ -0.84
PRDM1-204ENST00000424894 SF3B2Q13435 895 aaKnown RBP9.83□□□□□ -0.84
PRDM1-204ENST00000424894 CCDC7Q96M83 1385 aa9.83□□□□□ -0.84
PRDM1-204ENST00000424894 RGPD3A6NKT7 1758 aaPredicted RBP9.83□□□□□ -0.84
PRDM1-204ENST00000424894 RGPD4Q7Z3J3 1758 aa9.83□□□□□ -0.84
PRDM1-204ENST00000424894 SLC24A1O60721 1099 aa9.82□□□□□ -0.84
PRDM1-204ENST00000424894 FAM196AQ6ZSG2 479 aa9.82□□□□□ -0.84
PRDM1-204ENST00000424894 RTL1A6NKG5 1358 aa9.82□□□□□ -0.84
PRDM1-204ENST00000424894 CGNL1Q0VF96 1302 aa9.82□□□□□ -0.84
PRDM1-204ENST00000424894 FLT4P35916 1363 aa9.81□□□□□ -0.84
PRDM1-204ENST00000424894 IL2RBP14784 551 aa9.81□□□□□ -0.84
PRDM1-204ENST00000424894 DDX54Q8TDD1 881 aaKnown RBP9.81□□□□□ -0.84
PRDM1-204ENST00000424894 POLKQ9UBT6 870 aa9.81□□□□□ -0.84
PRDM1-204ENST00000424894 INSRP06213 1382 aa9.8□□□□□ -0.84
PRDM1-204ENST00000424894 BAG6P46379 1132 aa9.8□□□□□ -0.84
PRDM1-204ENST00000424894 CC2D1BQ5T0F9 858 aaKnown RBP9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms