RNA–Protein interactions for RNA: ENST00000424234.6

ACTN4-203, Transcript of actinin alpha 4, humanhuman

TSL 1 (best) BASIC

Gene ACTN4, Length 1,566 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-203ENST00000424234 RRS1Q15050 365 aaKnown RBP18.87■□□□□ 0.61
ACTN4-203ENST00000424234 RTL1A6NKG5 1358 aa18.86■□□□□ 0.61
ACTN4-203ENST00000424234 MAP3K19Q56UN5 1328 aa18.86■□□□□ 0.61
ACTN4-203ENST00000424234 ZBED9Q6R2W3 1325 aa18.86■□□□□ 0.61
ACTN4-203ENST00000424234 KIAA0232Q92628 1395 aa18.86■□□□□ 0.61
ACTN4-203ENST00000424234 CAMTA1Q9Y6Y1 1673 aa18.86■□□□□ 0.61
ACTN4-203ENST00000424234 FAM9BQ8IZU0 186 aa18.85■□□□□ 0.61
ACTN4-203ENST00000424234 EMILIN1Q9Y6C2 1016 aa18.85■□□□□ 0.61
ACTN4-203ENST00000424234 POLKQ9UBT6 870 aa18.85■□□□□ 0.61
ACTN4-203ENST00000424234 WNK3Q9BYP7 1800 aa18.84■□□□□ 0.61
ACTN4-203ENST00000424234 SPATA31A6Q5VVP1 1343 aa18.84■□□□□ 0.61
ACTN4-203ENST00000424234 KIF24Q5T7B8 1368 aa18.84■□□□□ 0.61
ACTN4-203ENST00000424234 HAP1P54257 671 aaPredicted RBP18.84■□□□□ 0.61
ACTN4-203ENST00000424234 FLT4P35916 1363 aa18.83■□□□□ 0.61
ACTN4-203ENST00000424234 ARHGEF25Q86VW2 580 aa18.83■□□□□ 0.6
ACTN4-203ENST00000424234 ZC3H6P61129 1189 aaKnown RBP18.82■□□□□ 0.6
ACTN4-203ENST00000424234 MTHFSP49914 203 aa18.81■□□□□ 0.6
ACTN4-203ENST00000424234 BLMP54132 1417 aaPredicted RBP18.81■□□□□ 0.6
ACTN4-203ENST00000424234 NUTM2BA6NNL0 878 aaPredicted RBP18.79■□□□□ 0.6
ACTN4-203ENST00000424234 NUTM2EB1AL46 878 aaPredicted RBP18.79■□□□□ 0.6
ACTN4-203ENST00000424234 NUTM2AQ8IVF1 878 aaPredicted RBP18.79■□□□□ 0.6
ACTN4-203ENST00000424234 PRDM11Q9NQV5 511 aa18.79■□□□□ 0.6
ACTN4-203ENST00000424234 INSRP06213 1382 aa18.79■□□□□ 0.6
ACTN4-203ENST00000424234 COL5A2P05997 1499 aaPredicted RBP18.79■□□□□ 0.6
ACTN4-203ENST00000424234 ZBTB7CA1YPR0 619 aa18.78■□□□□ 0.6
ACTN4-203ENST00000424234 PPM1GO15355 546 aaPredicted RBP18.78■□□□□ 0.6
ACTN4-203ENST00000424234 HOXC9P31274 260 aa18.78■□□□□ 0.6
ACTN4-203ENST00000424234 AMPHP49418 695 aa18.77■□□□□ 0.6
ACTN4-203ENST00000424234 CHRNA2Q15822 529 aa18.77■□□□□ 0.6
ACTN4-203ENST00000424234 SLIT2O94813 1529 aa18.77■□□□□ 0.6
ACTN4-203ENST00000424234 ADAMTS2O95450 1211 aa18.76■□□□□ 0.59
ACTN4-203ENST00000424234 IP6K1Q92551 441 aa18.76■□□□□ 0.59
ACTN4-203ENST00000424234 VIRMAQ69YN4 1812 aaKnown RBP18.75■□□□□ 0.59
ACTN4-203ENST00000424234 HSP90AB2PQ58FF8 381 aa18.75■□□□□ 0.59
ACTN4-203ENST00000424234 ERICH6BQ5W0A0 696 aa18.75■□□□□ 0.59
ACTN4-203ENST00000424234 FAM83GA6ND36 823 aa18.74■□□□□ 0.59
ACTN4-203ENST00000424234 AXIN2Q9Y2T1 843 aa18.74■□□□□ 0.59
ACTN4-203ENST00000424234 PARP4Q9UKK3 1724 aaKnown RBP18.73■□□□□ 0.59
ACTN4-203ENST00000424234 CFAP53Q96M91 514 aa18.72■□□□□ 0.59
ACTN4-203ENST00000424234 DLG5Q8TDM6 1919 aa18.72■□□□□ 0.59
ACTN4-203ENST00000424234 ERBB3P21860 1342 aa18.72■□□□□ 0.59
ACTN4-203ENST00000424234 PNISRQ8TF01 805 aaKnown RBP18.72■□□□□ 0.59
ACTN4-203ENST00000424234 NCAPD2Q15021 1401 aa18.7■□□□□ 0.58
ACTN4-203ENST00000424234 EIF4A2Q14240 407 aaKnown RBP18.7■□□□□ 0.58
ACTN4-203ENST00000424234 SHANK3Q9BYB0 1731 aa18.69■□□□□ 0.58
ACTN4-203ENST00000424234 C8orf37Q96NL8 207 aa18.69■□□□□ 0.58
ACTN4-203ENST00000424234 BCL9LQ86UU0 1499 aa18.69■□□□□ 0.58
ACTN4-203ENST00000424234 DIAPH1O60610 1272 aaKnown RBP18.68■□□□□ 0.58
ACTN4-203ENST00000424234 IL13P35225 146 aa18.68■□□□□ 0.58
ACTN4-203ENST00000424234 ANKRD24Q8TF21 1146 aa18.68■□□□□ 0.58
ACTN4-203ENST00000424234 BTG4Q9NY30 223 aa18.68■□□□□ 0.58
ACTN4-203ENST00000424234 PKD1L3Q7Z443 1732 aa18.68■□□□□ 0.58
ACTN4-203ENST00000424234 MEX3CQ5U5Q3 659 aaKnown RBP18.68■□□□□ 0.58
ACTN4-203ENST00000424234 ILDR1Q86SU0 546 aaPredicted RBP18.68■□□□□ 0.58
ACTN4-203ENST00000424234 LTV1Q96GA3 475 aaPredicted RBP18.68■□□□□ 0.58
ACTN4-203ENST00000424234 TSHZ2Q9NRE2 1034 aa18.68■□□□□ 0.58
ACTN4-203ENST00000424234 WDR17Q8IZU2 1322 aa18.66■□□□□ 0.58
ACTN4-203ENST00000424234 CRB1P82279 1406 aa18.65■□□□□ 0.58
ACTN4-203ENST00000424234 IGSF1Q8N6C5 1336 aa18.65■□□□□ 0.58
ACTN4-203ENST00000424234 GLI3P10071 1580 aa18.64■□□□□ 0.58
ACTN4-203ENST00000424234 FNBP4Q8N3X1 1017 aaPredicted RBP18.64■□□□□ 0.58
ACTN4-203ENST00000424234 NGLY1Q96IV0 654 aa18.64■□□□□ 0.58
ACTN4-203ENST00000424234 STRN4Q9NRL3 753 aa18.64■□□□□ 0.57
ACTN4-203ENST00000424234 AFF2P51816 1311 aa18.63■□□□□ 0.57
ACTN4-203ENST00000424234 KDRP35968 1356 aa18.63■□□□□ 0.57
ACTN4-203ENST00000424234 LRRC37A3O60309 1634 aa18.62■□□□□ 0.57
ACTN4-203ENST00000424234 LARP1Q6PKG0 1096 aaKnown RBP18.62■□□□□ 0.57
ACTN4-203ENST00000424234 EYA1Q99502 592 aa18.62■□□□□ 0.57
ACTN4-203ENST00000424234 NUDCQ9Y266 331 aa18.62■□□□□ 0.57
ACTN4-203ENST00000424234 U2SURPO15042 1029 aaKnown RBP18.61■□□□□ 0.57
ACTN4-203ENST00000424234 CSB-PGBD3P0DP91 1061 aa18.61■□□□□ 0.57
ACTN4-203ENST00000424234 NBPF6Q5VWK0 638 aa18.61■□□□□ 0.57
ACTN4-203ENST00000424234 NBPF4Q96M43 638 aa18.61■□□□□ 0.57
ACTN4-203ENST00000424234 THSD7AQ9UPZ6 1657 aa18.61■□□□□ 0.57
ACTN4-203ENST00000424234 WDR43Q15061 677 aaKnown RBP eCLIP18.6■□□□□ 0.573e-7■□□□□ 10.2
ACTN4-203ENST00000424234 UNC5CLQ8IV45 518 aa18.6■□□□□ 0.57
ACTN4-203ENST00000424234 BRWD3Q6RI45 1802 aa18.6■□□□□ 0.57
ACTN4-203ENST00000424234 ATRNO75882 1429 aa18.6■□□□□ 0.57
ACTN4-203ENST00000424234 MEGF6O75095 1541 aa18.6■□□□□ 0.57
ACTN4-203ENST00000424234 EVA1CP58658 441 aa18.59■□□□□ 0.57
ACTN4-203ENST00000424234 USHBP1Q8N6Y0 703 aa18.59■□□□□ 0.57
ACTN4-203ENST00000424234 U2AF1L5P0DN76 240 aaPredicted RBP18.59■□□□□ 0.57
ACTN4-203ENST00000424234 U2AF1Q01081 240 aaKnown RBP eCLIP18.59■□□□□ 0.57
ACTN4-203ENST00000424234 TOM1L2Q6ZVM7 507 aa18.59■□□□□ 0.57
ACTN4-203ENST00000424234 AEBP1Q8IUX7 1158 aa18.59■□□□□ 0.57
ACTN4-203ENST00000424234 NLRP2Q9NX02 1062 aa18.59■□□□□ 0.57
ACTN4-203ENST00000424234 PPP4R2Q9NY27 417 aa18.59■□□□□ 0.57
ACTN4-203ENST00000424234 USP21Q9UK80 565 aa18.59■□□□□ 0.57
ACTN4-203ENST00000424234 HMOX1P09601 288 aa18.57■□□□□ 0.56
ACTN4-203ENST00000424234 SULT6B1Q6IMI4 303 aa18.57■□□□□ 0.56
ACTN4-203ENST00000424234 CARD10Q9BWT7 1032 aa18.57■□□□□ 0.56
ACTN4-203ENST00000424234 ADAMTS8Q9UP79 889 aa18.57■□□□□ 0.56
ACTN4-203ENST00000424234 DISP2A7MBM2 1401 aa18.56■□□□□ 0.56
ACTN4-203ENST00000424234 IRX6P78412 446 aaPredicted RBP18.56■□□□□ 0.56
ACTN4-203ENST00000424234 RSPH6AQ9H0K4 717 aa18.56■□□□□ 0.56
ACTN4-203ENST00000424234 SCN11AQ9UI33 1791 aa18.56■□□□□ 0.56
ACTN4-203ENST00000424234 SPATA31A5Q5VU36 1347 aa18.56■□□□□ 0.56
ACTN4-203ENST00000424234 SPATA31A7Q8IWB4 1347 aa18.56■□□□□ 0.56
ACTN4-203ENST00000424234 VPS72Q15906 364 aa18.55■□□□□ 0.56
ACTN4-203ENST00000424234 KAT6BQ8WYB5 2073 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms