RNA–Protein interactions for RNA: ENST00000423136.1

GAPDHP55-201, Transcript of glyceraldehyde 3 phosphate dehydrogenase pseudogene 55, humanhuman

BASIC

Gene GAPDHP55, Length 803 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDHP55-201ENST00000423136 CCDC125Q86Z20 511 aa10.76□□□□□ -0.69
GAPDHP55-201ENST00000423136 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.75□□□□□ -0.69
GAPDHP55-201ENST00000423136 PPIP5K1Q6PFW1 1433 aa10.75□□□□□ -0.69
GAPDHP55-201ENST00000423136 APBB1O00213 710 aa10.74□□□□□ -0.69
GAPDHP55-201ENST00000423136 RNF25Q96BH1 459 aaPredicted RBP10.74□□□□□ -0.69
GAPDHP55-201ENST00000423136 CABP1Q9NZU7 370 aa10.74□□□□□ -0.69
GAPDHP55-201ENST00000423136 ALS2Q96Q42 1657 aa10.73□□□□□ -0.69
GAPDHP55-201ENST00000423136 ITSN1Q15811 1721 aa10.73□□□□□ -0.69
GAPDHP55-201ENST00000423136 BRWD3Q6RI45 1802 aa10.73□□□□□ -0.69
GAPDHP55-201ENST00000423136 SOX12O15370 315 aa10.73□□□□□ -0.69
GAPDHP55-201ENST00000423136 IGSF3O75054 1194 aa10.73□□□□□ -0.69
GAPDHP55-201ENST00000423136 ROCK2O75116 1388 aaKnown RBP10.73□□□□□ -0.69
GAPDHP55-201ENST00000423136 BLMP54132 1417 aaPredicted RBP10.73□□□□□ -0.69
GAPDHP55-201ENST00000423136 NWD2Q9ULI1 1742 aa10.72□□□□□ -0.69
GAPDHP55-201ENST00000423136 PLEKHG3A1L390 1219 aa10.72□□□□□ -0.69
GAPDHP55-201ENST00000423136 SPATA31A5Q5VU36 1347 aa10.72□□□□□ -0.69
GAPDHP55-201ENST00000423136 SPATA31A7Q8IWB4 1347 aa10.72□□□□□ -0.69
GAPDHP55-201ENST00000423136 COL14A1Q05707 1796 aaKnown RBP10.72□□□□□ -0.69
GAPDHP55-201ENST00000423136 POLR3AO14802 1390 aaPredicted RBP10.71□□□□□ -0.69
GAPDHP55-201ENST00000423136 ONECUT3O60422 494 aaPredicted RBP10.71□□□□□ -0.69
GAPDHP55-201ENST00000423136 NLRP6P59044 892 aa10.71□□□□□ -0.69
GAPDHP55-201ENST00000423136 EVC2Q86UK5 1308 aa10.71□□□□□ -0.69
GAPDHP55-201ENST00000423136 NLRP13Q86W25 1043 aa10.71□□□□□ -0.69
GAPDHP55-201ENST00000423136 KCTD17Q8N5Z5 321 aa10.71□□□□□ -0.69
GAPDHP55-201ENST00000423136 KIAA1210Q9ULL0 1709 aa10.71□□□□□ -0.69
GAPDHP55-201ENST00000423136 PSDA5PKW4 1024 aaPredicted RBP10.7□□□□□ -0.7
GAPDHP55-201ENST00000423136 ZMYND10O75800 440 aa10.7□□□□□ -0.7
GAPDHP55-201ENST00000423136 BAG6P46379 1132 aa10.7□□□□□ -0.7
GAPDHP55-201ENST00000423136 LARP1Q6PKG0 1096 aaKnown RBP10.7□□□□□ -0.7
GAPDHP55-201ENST00000423136 NRAPQ86VF7 1730 aa10.7□□□□□ -0.7
GAPDHP55-201ENST00000423136 QRICH2Q9H0J4 1663 aa10.69□□□□□ -0.7
GAPDHP55-201ENST00000423136 SPATA31A1Q5TZJ5 1347 aa10.69□□□□□ -0.7
GAPDHP55-201ENST00000423136 GCP02774 474 aa10.69□□□□□ -0.7
GAPDHP55-201ENST00000423136 EN1Q05925 392 aaPredicted RBP10.69□□□□□ -0.7
GAPDHP55-201ENST00000423136 WDR70Q9NW82 654 aa10.69□□□□□ -0.7
GAPDHP55-201ENST00000423136 HSP90B1P14625 803 aaKnown RBP10.68□□□□□ -0.7
GAPDHP55-201ENST00000423136 PDE3BQ13370 1112 aa10.68□□□□□ -0.7
GAPDHP55-201ENST00000423136 TOPAZ1Q8N9V7 1692 aa10.68□□□□□ -0.7
GAPDHP55-201ENST00000423136 PHRF1Q9P1Y6 1649 aaKnown RBP10.67□□□□□ -0.7
GAPDHP55-201ENST00000423136 TRIM37O94972 964 aa10.67□□□□□ -0.7
GAPDHP55-201ENST00000423136 MIER1Q8N108 512 aa10.67□□□□□ -0.7
GAPDHP55-201ENST00000423136 RGS22Q8NE09 1264 aa10.67□□□□□ -0.7
GAPDHP55-201ENST00000423136 TMC1Q8TDI8 760 aa10.67□□□□□ -0.7
GAPDHP55-201ENST00000423136 TRAIPQ9BWF2 469 aa10.67□□□□□ -0.7
GAPDHP55-201ENST00000423136 CARD11Q9BXL7 1154 aa10.67□□□□□ -0.7
GAPDHP55-201ENST00000423136 ZBTB47Q9UFB7 747 aaPredicted RBP10.67□□□□□ -0.7
GAPDHP55-201ENST00000423136 CRYBG1Q9Y4K1 1723 aa10.67□□□□□ -0.7
GAPDHP55-201ENST00000423136 SSH2Q76I76 1423 aa10.67□□□□□ -0.7
GAPDHP55-201ENST00000423136 TONSLQ96HA7 1378 aa10.66□□□□□ -0.7
GAPDHP55-201ENST00000423136 RAD21O60216 631 aa10.66□□□□□ -0.7
GAPDHP55-201ENST00000423136 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.66□□□□□ -0.7
GAPDHP55-201ENST00000423136 TRPM1Q7Z4N2 1603 aa10.66□□□□□ -0.7
GAPDHP55-201ENST00000423136 USP19O94966 1318 aa10.65□□□□□ -0.7
GAPDHP55-201ENST00000423136 CDK11BP21127 795 aaKnown RBP10.65□□□□□ -0.7
GAPDHP55-201ENST00000423136 TOM1L2Q6ZVM7 507 aa10.65□□□□□ -0.7
GAPDHP55-201ENST00000423136 TCP11L2Q8N4U5 519 aa10.65□□□□□ -0.7
GAPDHP55-201ENST00000423136 USP6P35125 1406 aa10.65□□□□□ -0.7
GAPDHP55-201ENST00000423136 NRKQ7Z2Y5 1582 aa10.65□□□□□ -0.71
GAPDHP55-201ENST00000423136 CAMTA1Q9Y6Y1 1673 aa10.64□□□□□ -0.71
GAPDHP55-201ENST00000423136 RIOK3O14730 519 aaKnown RBP10.64□□□□□ -0.71
GAPDHP55-201ENST00000423136 APBA3O96018 575 aa10.64□□□□□ -0.71
GAPDHP55-201ENST00000423136 CSB-PGBD3P0DP91 1061 aa10.64□□□□□ -0.71
GAPDHP55-201ENST00000423136 FAM196AQ6ZSG2 479 aa10.64□□□□□ -0.71
GAPDHP55-201ENST00000423136 CPDO75976 1380 aa10.64□□□□□ -0.71
GAPDHP55-201ENST00000423136 TTC21BQ7Z4L5 1316 aa10.63□□□□□ -0.71
GAPDHP55-201ENST00000423136 R3HDM1Q15032 1099 aaKnown RBP10.63□□□□□ -0.71
GAPDHP55-201ENST00000423136 EZH2Q15910 746 aaKnown RBP10.63□□□□□ -0.71
GAPDHP55-201ENST00000423136 KTN1Q86UP2 1357 aaKnown RBP10.63□□□□□ -0.71
GAPDHP55-201ENST00000423136 BARGINQ6ZT62 677 aa10.62□□□□□ -0.71
GAPDHP55-201ENST00000423136 ARHGEF1Q92888 912 aaKnown RBP10.62□□□□□ -0.71
GAPDHP55-201ENST00000423136 ZNF692Q9BU19 519 aaPredicted RBP10.62□□□□□ -0.71
GAPDHP55-201ENST00000423136 THSD7AQ9UPZ6 1657 aa10.61□□□□□ -0.71
GAPDHP55-201ENST00000423136 IL27Q8NEV9 243 aa10.61□□□□□ -0.71
GAPDHP55-201ENST00000423136 PUS7Q96PZ0 661 aaKnown RBP10.61□□□□□ -0.71
GAPDHP55-201ENST00000423136 AXIN2Q9Y2T1 843 aa10.61□□□□□ -0.71
GAPDHP55-201ENST00000423136 COL5A2P05997 1499 aaPredicted RBP10.61□□□□□ -0.71
GAPDHP55-201ENST00000423136 TESPA1A2RU30 521 aaPredicted RBP10.6□□□□□ -0.71
GAPDHP55-201ENST00000423136 STK25O00506 426 aa10.6□□□□□ -0.71
GAPDHP55-201ENST00000423136 MKRN3Q13064 507 aaKnown RBP10.6□□□□□ -0.71
GAPDHP55-201ENST00000423136 NME9Q86XW9 330 aa10.6□□□□□ -0.71
GAPDHP55-201ENST00000423136 BRD4O60885 1362 aaPredicted RBP10.6□□□□□ -0.71
GAPDHP55-201ENST00000423136 CRB1P82279 1406 aa10.59□□□□□ -0.71
GAPDHP55-201ENST00000423136 FLIIQ13045 1269 aa10.59□□□□□ -0.71
GAPDHP55-201ENST00000423136 DDB1Q16531 1140 aa10.59□□□□□ -0.71
GAPDHP55-201ENST00000423136 HDGFL2Q7Z4V5 671 aaPredicted RBP10.59□□□□□ -0.71
GAPDHP55-201ENST00000423136 KCNH5Q8NCM2 988 aa10.59□□□□□ -0.71
GAPDHP55-201ENST00000423136 SLC12A5Q9H2X9 1139 aa10.59□□□□□ -0.71
GAPDHP55-201ENST00000423136 THRAP3Q9Y2W1 955 aaKnown RBP10.59□□□□□ -0.71
GAPDHP55-201ENST00000423136 AATKQ6ZMQ8 1374 aa10.59□□□□□ -0.71
GAPDHP55-201ENST00000423136 PIK3C2AO00443 1686 aa10.59□□□□□ -0.71
GAPDHP55-201ENST00000423136 TTC21AQ8NDW8 1320 aa10.58□□□□□ -0.71
GAPDHP55-201ENST00000423136 RGPD1P0DJD0 1748 aa10.58□□□□□ -0.72
GAPDHP55-201ENST00000423136 LMO7Q8WWI1 1683 aa10.58□□□□□ -0.72
GAPDHP55-201ENST00000423136 ARHGEF25Q86VW2 580 aa10.58□□□□□ -0.72
GAPDHP55-201ENST00000423136 CAMKK2Q96RR4 588 aa10.58□□□□□ -0.72
GAPDHP55-201ENST00000423136 GSE1Q14687 1217 aa10.57□□□□□ -0.72
GAPDHP55-201ENST00000423136 CCDC82Q8N4S0 544 aa10.57□□□□□ -0.72
GAPDHP55-201ENST00000423136 NLRP2Q9NX02 1062 aa10.57□□□□□ -0.72
GAPDHP55-201ENST00000423136 TERF2IPQ9NYB0 399 aa10.57□□□□□ -0.72
GAPDHP55-201ENST00000423136 SLIT3O75094 1523 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms