RNA–Protein interactions for RNA: ENST00000423061.5

SYNE1-212, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE1, Length 27,436 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-212ENST00000423061 NUCB2P80303 420 aa4.06□□□□□ -1.76
SYNE1-212ENST00000423061 ANKRD30AQ9BXX3 1397 aa4.06□□□□□ -1.76
SYNE1-212ENST00000423061 ELF2Q15723 593 aa4.06□□□□□ -1.76
SYNE1-212ENST00000423061 MRFAP1Q9Y605 127 aa4.06□□□□□ -1.76
SYNE1-212ENST00000423061 CFAP43Q8NDM7 1665 aa4.06□□□□□ -1.76
SYNE1-212ENST00000423061 NBPF6Q5VWK0 638 aa4.05□□□□□ -1.76
SYNE1-212ENST00000423061 NBPF5PQ86XG9 351 aaPredicted RBP4.05□□□□□ -1.76
SYNE1-212ENST00000423061 NBPF4Q96M43 638 aa4.05□□□□□ -1.76
SYNE1-212ENST00000423061 PYCARDQ9ULZ3 195 aa4.05□□□□□ -1.76
SYNE1-212ENST00000423061 CEP135Q66GS9 1140 aa4.05□□□□□ -1.76
SYNE1-212ENST00000423061 PLEKHH2Q8IVE3 1493 aa4.05□□□□□ -1.76
SYNE1-212ENST00000423061 GBP2P32456 591 aaPredicted RBP4.05□□□□□ -1.76
SYNE1-212ENST00000423061 NOP2P46087 812 aaKnown RBP4.05□□□□□ -1.76
SYNE1-212ENST00000423061 STK11IPQ8N1F8 1099 aa4.05□□□□□ -1.76
SYNE1-212ENST00000423061 LCMT1Q9UIC8 334 aa4.05□□□□□ -1.76
SYNE1-212ENST00000423061 KANK1Q14678 1352 aa4.05□□□□□ -1.76
SYNE1-212ENST00000423061 CCDC196A0A1B0GTZ2 297 aa4.05□□□□□ -1.76
SYNE1-212ENST00000423061 HMMRO75330 724 aa4.05□□□□□ -1.76
SYNE1-212ENST00000423061 CHGAP10645 457 aaKnown RBP4.05□□□□□ -1.76
SYNE1-212ENST00000423061 IPO7O95373 1038 aaKnown RBP4.05□□□□□ -1.76
SYNE1-212ENST00000423061 SF3A1Q15459 793 aaKnown RBP4.05□□□□□ -1.76
SYNE1-212ENST00000423061 TOP2BQ02880 1626 aa4.05□□□□□ -1.76
SYNE1-212ENST00000423061 GCKP35557 465 aa4.05□□□□□ -1.76
SYNE1-212ENST00000423061 PPM1EQ8WY54 764 aa4.05□□□□□ -1.76
SYNE1-212ENST00000423061 PUS7Q96PZ0 661 aaKnown RBP4.05□□□□□ -1.76
SYNE1-212ENST00000423061 RRBP1Q9P2E9 1410 aaKnown RBP4.05□□□□□ -1.76
SYNE1-212ENST00000423061 ARAP1Q96P48 1450 aa4.05□□□□□ -1.76
SYNE1-212ENST00000423061 MYOM3Q5VTT5 1437 aa4.05□□□□□ -1.76
SYNE1-212ENST00000423061 TMF1P82094 1093 aa4.05□□□□□ -1.76
SYNE1-212ENST00000423061 RAD51AP2Q09MP3 1159 aa4.05□□□□□ -1.76
SYNE1-212ENST00000423061 TMCO3Q6UWJ1 677 aa4.05□□□□□ -1.76
SYNE1-212ENST00000423061 DDX11Q96FC9 970 aa4.05□□□□□ -1.76
SYNE1-212ENST00000423061 SMC2O95347 1197 aa4.05□□□□□ -1.76
SYNE1-212ENST00000423061 HSP90B2PQ58FF3 399 aa4.05□□□□□ -1.76
SYNE1-212ENST00000423061 ARGLU1Q9NWB6 273 aaPredicted RBP4.05□□□□□ -1.76
SYNE1-212ENST00000423061 NBPF20Q3BBV1 942 aa4.05□□□□□ -1.76
SYNE1-212ENST00000423061 POLD1P28340 1107 aa4.05□□□□□ -1.76
SYNE1-212ENST00000423061 AP1ARQ63HQ0 302 aa4.05□□□□□ -1.76
SYNE1-212ENST00000423061 UBXN4Q92575 508 aa4.05□□□□□ -1.76
SYNE1-212ENST00000423061 PDRG1Q9NUG6 133 aa4.05□□□□□ -1.76
SYNE1-212ENST00000423061 WDR97A6NE52 1622 aa4.05□□□□□ -1.76
SYNE1-212ENST00000423061 NCBP1Q09161 790 aaKnown RBP4.05□□□□□ -1.76
SYNE1-212ENST00000423061 SETSIPP0DME0 302 aa4.05□□□□□ -1.76
SYNE1-212ENST00000423061 CCDC181Q5TID7 509 aa4.04□□□□□ -1.76
SYNE1-212ENST00000423061 L3MBTL2Q969R5 705 aa4.04□□□□□ -1.76
SYNE1-212ENST00000423061 JPH2Q9BR39 696 aaPredicted RBP4.04□□□□□ -1.76
SYNE1-212ENST00000423061 ARL10Q8N8L6 244 aa4.04□□□□□ -1.76
SYNE1-212ENST00000423061 TPD52L2O43399 206 aaKnown RBP4.04□□□□□ -1.76
SYNE1-212ENST00000423061 KIAA0754O94854 1291 aa4.04□□□□□ -1.76
SYNE1-212ENST00000423061 ITPRIPQ8IWB1 547 aa4.04□□□□□ -1.76
SYNE1-212ENST00000423061 YY1AP1Q9H869 796 aa4.04□□□□□ -1.76
SYNE1-212ENST00000423061 MCM6Q14566 821 aa4.04□□□□□ -1.76
SYNE1-212ENST00000423061 PES1O00541 588 aaKnown RBP4.04□□□□□ -1.76
SYNE1-212ENST00000423061 KIF1CO43896 1103 aaKnown RBP4.04□□□□□ -1.76
SYNE1-212ENST00000423061 USP8P40818 1118 aa4.04□□□□□ -1.76
SYNE1-212ENST00000423061 CFDP1Q9UEE9 299 aaPredicted RBP4.04□□□□□ -1.76
SYNE1-212ENST00000423061 PLEKHA4Q9H4M7 779 aa4.04□□□□□ -1.76
SYNE1-212ENST00000423061 MRFAP1L1Q96HT8 127 aa4.04□□□□□ -1.76
SYNE1-212ENST00000423061 ZCCHC17Q9NP64 241 aaKnown RBP4.04□□□□□ -1.76
SYNE1-212ENST00000423061 CTNNA3Q9UI47 895 aa4.04□□□□□ -1.76
SYNE1-212ENST00000423061 LIG1P18858 919 aa4.04□□□□□ -1.76
SYNE1-212ENST00000423061 GBP6Q6ZN66 633 aa4.04□□□□□ -1.76
SYNE1-212ENST00000423061 STAG3Q9UJ98 1225 aa4.04□□□□□ -1.76
SYNE1-212ENST00000423061 SIRT1Q96EB6 747 aa4.04□□□□□ -1.76
SYNE1-212ENST00000423061 DDX41Q9UJV9 622 aaKnown RBP4.04□□□□□ -1.76
SYNE1-212ENST00000423061 NINLQ9Y2I6 1382 aa4.04□□□□□ -1.76
SYNE1-212ENST00000423061 LIG3P49916 1009 aa4.04□□□□□ -1.76
SYNE1-212ENST00000423061 CDR1P51861 262 aa4.04□□□□□ -1.76
SYNE1-212ENST00000423061 RABEP1Q15276 862 aa4.04□□□□□ -1.76
SYNE1-212ENST00000423061 BCL2L13Q9BXK5 485 aa4.04□□□□□ -1.76
SYNE1-212ENST00000423061 VEZTQ9HBM0 779 aa4.04□□□□□ -1.76
SYNE1-212ENST00000423061 RBBP5Q15291 538 aaKnown RBP4.04□□□□□ -1.76
SYNE1-212ENST00000423061 PMFBP1Q8TBY8 1022 aa4.04□□□□□ -1.76
SYNE1-212ENST00000423061 KIF16BQ96L93 1317 aa4.04□□□□□ -1.76
SYNE1-212ENST00000423061 CCDC27Q2M243 656 aa4.04□□□□□ -1.76
SYNE1-212ENST00000423061 SCLT1Q96NL6 688 aa4.04□□□□□ -1.76
SYNE1-212ENST00000423061 NFXL1Q6ZNB6 911 aa4.04□□□□□ -1.76
SYNE1-212ENST00000423061 RANBP1P43487 201 aa4.03□□□□□ -1.76
SYNE1-212ENST00000423061 ARMC9Q7Z3E5 817 aa4.03□□□□□ -1.76
SYNE1-212ENST00000423061 VPS18Q9P253 973 aa4.03□□□□□ -1.76
SYNE1-212ENST00000423061 SMTNL1A8MU46 457 aa4.03□□□□□ -1.76
SYNE1-212ENST00000423061 GDPD2Q9HCC8 539 aa4.03□□□□□ -1.76
SYNE1-212ENST00000423061 RBM5P52756 815 aaKnown RBP eCLIP4.03□□□□□ -1.76
SYNE1-212ENST00000423061 ANKRD45Q5TZF3 282 aa4.03□□□□□ -1.76
SYNE1-212ENST00000423061 FILIP1Q7Z7B0 1213 aa4.03□□□□□ -1.76
SYNE1-212ENST00000423061 PAX7P23759 505 aa4.03□□□□□ -1.76
SYNE1-212ENST00000423061 MYO1CO00159 1063 aa4.03□□□□□ -1.76
SYNE1-212ENST00000423061 ARMC3Q5W041 872 aa4.03□□□□□ -1.76
SYNE1-212ENST00000423061 RBM42Q9BTD8 480 aaKnown RBP4.03□□□□□ -1.76
SYNE1-212ENST00000423061 MYBBP1AQ9BQG0 1328 aaKnown RBP4.03□□□□□ -1.76
SYNE1-212ENST00000423061 PHACTR2O75167 634 aa4.03□□□□□ -1.76
SYNE1-212ENST00000423061 NEFHP12036 1026 aa4.03□□□□□ -1.76
SYNE1-212ENST00000423061 GOLGA2Q08379 1002 aa4.03□□□□□ -1.76
SYNE1-212ENST00000423061 PIBF1Q8WXW3 757 aa4.03□□□□□ -1.76
SYNE1-212ENST00000423061 CAMK4Q16566 473 aa4.03□□□□□ -1.76
SYNE1-212ENST00000423061 RPUSD2Q8IZ73 545 aaKnown RBP4.03□□□□□ -1.76
SYNE1-212ENST00000423061 RRP7AQ9Y3A4 280 aaKnown RBP4.03□□□□□ -1.76
SYNE1-212ENST00000423061 MORC2Q9Y6X9 1032 aaPredicted RBP4.03□□□□□ -1.76
SYNE1-212ENST00000423061 LRRC9Q6ZRR7 1453 aa4.03□□□□□ -1.76
SYNE1-212ENST00000423061 KIF21AQ7Z4S6 1674 aa4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 93.8 ms