RNA–Protein interactions for RNA: ENST00000422109.6

CTCFL-203, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best)

Gene CTCFL, Length 2,964 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-203ENST00000422109 NCBP3Q53F19 620 aaKnown RBP17.29■□□□□ 0.36
CTCFL-203ENST00000422109 MCM10Q7L590 875 aa17.29■□□□□ 0.36
CTCFL-203ENST00000422109 MIS18AQ9NYP9 233 aa17.29■□□□□ 0.36
CTCFL-203ENST00000422109 ZBTB7BO15156 539 aaPredicted RBP17.28■□□□□ 0.36
CTCFL-203ENST00000422109 FAM135BQ49AJ0 1406 aa17.28■□□□□ 0.36
CTCFL-203ENST00000422109 A2ML1A8K2U0 1454 aa17.28■□□□□ 0.36
CTCFL-203ENST00000422109 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.28■□□□□ 0.36
CTCFL-203ENST00000422109 CCDC61Q9Y6R9 512 aa17.28■□□□□ 0.36
CTCFL-203ENST00000422109 MAP2P11137 1827 aaKnown RBP17.28■□□□□ 0.36
CTCFL-203ENST00000422109 HSCBQ8IWL3 235 aa17.27■□□□□ 0.36
CTCFL-203ENST00000422109 CLTCQ00610 1675 aaKnown RBP17.27■□□□□ 0.35
CTCFL-203ENST00000422109 SLC26A8Q96RN1 970 aa17.27■□□□□ 0.35
CTCFL-203ENST00000422109 SIRT2Q8IXJ6 389 aa17.25■□□□□ 0.35
CTCFL-203ENST00000422109 PRR36Q9H6K5 1346 aa17.25■□□□□ 0.35
CTCFL-203ENST00000422109 IFT57Q9NWB7 429 aa17.25■□□□□ 0.35
CTCFL-203ENST00000422109 CEBPAP49715 358 aaPredicted RBP17.24■□□□□ 0.35
CTCFL-203ENST00000422109 HSP90AB2PQ58FF8 381 aa17.24■□□□□ 0.35
CTCFL-203ENST00000422109 RBM42Q9BTD8 480 aaKnown RBP17.24■□□□□ 0.35
CTCFL-203ENST00000422109 ANO8Q9HCE9 1232 aaPredicted RBP17.24■□□□□ 0.35
CTCFL-203ENST00000422109 MED14O60244 1454 aa17.24■□□□□ 0.35
CTCFL-203ENST00000422109 KIF20BQ96Q89 1820 aa17.24■□□□□ 0.35
CTCFL-203ENST00000422109 CALD1Q05682 793 aaKnown RBP17.24■□□□□ 0.35
CTCFL-203ENST00000422109 HSP90AA1P07900 732 aaKnown RBP17.23■□□□□ 0.35
CTCFL-203ENST00000422109 C16orf71Q8IYS4 520 aaPredicted RBP17.23■□□□□ 0.35
CTCFL-203ENST00000422109 CFAP44Q96MT7 982 aa17.23■□□□□ 0.35
CTCFL-203ENST00000422109 CPS1P31327 1500 aa17.23■□□□□ 0.35
CTCFL-203ENST00000422109 EIF4A2Q14240 407 aaKnown RBP17.22■□□□□ 0.35
CTCFL-203ENST00000422109 PLEKHG5O94827 1062 aa17.22■□□□□ 0.35
CTCFL-203ENST00000422109 HSP90AB1P08238 724 aaKnown RBP17.22■□□□□ 0.35
CTCFL-203ENST00000422109 ANKRD26Q9UPS8 1709 aa17.22■□□□□ 0.35
CTCFL-203ENST00000422109 FOXO3O43524 673 aa17.21■□□□□ 0.35
CTCFL-203ENST00000422109 EDC4Q6P2E9 1401 aaKnown RBP17.21■□□□□ 0.35
CTCFL-203ENST00000422109 ZMYM3Q14202 1370 aa17.21■□□□□ 0.35
CTCFL-203ENST00000422109 NUTM2GQ5VZR2 741 aa17.21■□□□□ 0.35
CTCFL-203ENST00000422109 NECTIN2Q92692 538 aa17.2■□□□□ 0.34
CTCFL-203ENST00000422109 ACEP12821 1306 aa17.2■□□□□ 0.34
CTCFL-203ENST00000422109 SMARCA5O60264 1052 aaPredicted RBP17.2■□□□□ 0.34
CTCFL-203ENST00000422109 MCM4P33991 863 aa17.2■□□□□ 0.34
CTCFL-203ENST00000422109 SLC4A10Q6U841 1118 aa17.2■□□□□ 0.34
CTCFL-203ENST00000422109 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.2■□□□□ 0.34
CTCFL-203ENST00000422109 ATP7BP35670 1465 aa17.2■□□□□ 0.34
CTCFL-203ENST00000422109 ZNF853P0CG23 659 aa17.19■□□□□ 0.34
CTCFL-203ENST00000422109 TBC1D9Q6ZT07 1266 aa17.19■□□□□ 0.34
CTCFL-203ENST00000422109 CHMP5Q9NZZ3 219 aa17.19■□□□□ 0.34
CTCFL-203ENST00000422109 CD2BP2O95400 341 aaKnown RBP17.19■□□□□ 0.34
CTCFL-203ENST00000422109 LMOD3Q0VAK6 560 aa17.19■□□□□ 0.34
CTCFL-203ENST00000422109 OTUD7AQ8TE49 926 aaPredicted RBP17.19■□□□□ 0.34
CTCFL-203ENST00000422109 CPSF1Q10570 1443 aaKnown RBP17.18■□□□□ 0.34
CTCFL-203ENST00000422109 GCC1Q96CN9 775 aa17.18■□□□□ 0.34
CTCFL-203ENST00000422109 API5Q9BZZ5 524 aaKnown RBP17.17■□□□□ 0.34
CTCFL-203ENST00000422109 ROBO2Q9HCK4 1378 aa17.17■□□□□ 0.34
CTCFL-203ENST00000422109 TTC21BQ7Z4L5 1316 aa17.16■□□□□ 0.34
CTCFL-203ENST00000422109 F6X3S4 739 aa17.16■□□□□ 0.34
CTCFL-203ENST00000422109 BMP2KLQ5H9B9 411 aa17.16■□□□□ 0.34
CTCFL-203ENST00000422109 ABCC4O15439 1325 aa17.16■□□□□ 0.34
CTCFL-203ENST00000422109 LTKP29376 864 aa17.16■□□□□ 0.34
CTCFL-203ENST00000422109 ZNF428Q96B54 188 aa17.16■□□□□ 0.34
CTCFL-203ENST00000422109 ARHGAP45Q92619 1136 aa17.15■□□□□ 0.34
CTCFL-203ENST00000422109 LTV1Q96GA3 475 aaPredicted RBP17.15■□□□□ 0.34
CTCFL-203ENST00000422109 TRAK2O60296 914 aa17.15■□□□□ 0.34
CTCFL-203ENST00000422109 SLC4A2P04920 1241 aa17.15■□□□□ 0.34
CTCFL-203ENST00000422109 HDGFP51858 240 aaKnown RBP17.15■□□□□ 0.34
CTCFL-203ENST00000422109 MEIS3Q99687 375 aa17.14■□□□□ 0.33
CTCFL-203ENST00000422109 ZNF692Q9BU19 519 aaPredicted RBP17.14■□□□□ 0.33
CTCFL-203ENST00000422109 GSPT1P15170 499 aaKnown RBP17.13■□□□□ 0.33
CTCFL-203ENST00000422109 C14orf37Q86TY3 774 aa17.13■□□□□ 0.33
CTCFL-203ENST00000422109 NGDNQ8NEJ9 315 aaKnown RBP17.13■□□□□ 0.33
CTCFL-203ENST00000422109 PANK2Q9BZ23 570 aa17.13■□□□□ 0.33
CTCFL-203ENST00000422109 CHMP4BQ9H444 224 aaKnown RBP17.13■□□□□ 0.33
CTCFL-203ENST00000422109 CDK12Q9NYV4 1490 aaPredicted RBP17.12■□□□□ 0.33
CTCFL-203ENST00000422109 G2E3Q7L622 706 aa17.12■□□□□ 0.33
CTCFL-203ENST00000422109 DIP2BQ9P265 1576 aa17.12■□□□□ 0.33
CTCFL-203ENST00000422109 PPP6R1Q9UPN7 881 aa17.12■□□□□ 0.33
CTCFL-203ENST00000422109 RIMBP3CA6NJZ7 1639 aa17.12■□□□□ 0.33
CTCFL-203ENST00000422109 RIMBP3BA6NNM3 1639 aa17.12■□□□□ 0.33
CTCFL-203ENST00000422109 RIMBP3Q9UFD9 1639 aa17.12■□□□□ 0.33
CTCFL-203ENST00000422109 PTCH1Q13635 1447 aa17.12■□□□□ 0.33
CTCFL-203ENST00000422109 ZBTB7CA1YPR0 619 aa17.12■□□□□ 0.33
CTCFL-203ENST00000422109 RBM25P49756 843 aaKnown RBP17.12■□□□□ 0.33
CTCFL-203ENST00000422109 BRPF1P55201 1214 aaPredicted RBP17.12■□□□□ 0.33
CTCFL-203ENST00000422109 PLEKHM2Q8IWE5 1019 aa17.11■□□□□ 0.33
CTCFL-203ENST00000422109 KIF2CQ99661 725 aa17.11■□□□□ 0.33
CTCFL-203ENST00000422109 TNRQ92752 1358 aa17.11■□□□□ 0.33
CTCFL-203ENST00000422109 AMPHP49418 695 aa17.11■□□□□ 0.33
CTCFL-203ENST00000422109 RTF1Q92541 710 aaKnown RBP17.11■□□□□ 0.33
CTCFL-203ENST00000422109 TSPYL4Q9UJ04 414 aa17.11■□□□□ 0.33
CTCFL-203ENST00000422109 DLC1Q96QB1 1528 aa17.11■□□□□ 0.33
CTCFL-203ENST00000422109 DLG5Q8TDM6 1919 aa17.11■□□□□ 0.33
CTCFL-203ENST00000422109 GOLGA6L3A6NEY3 463 aa17.1■□□□□ 0.33
CTCFL-203ENST00000422109 TSHZ3Q63HK5 1081 aa17.1■□□□□ 0.33
CTCFL-203ENST00000422109 RBM33Q96EV2 1170 aaKnown RBP17.1■□□□□ 0.33
CTCFL-203ENST00000422109 AATKQ6ZMQ8 1374 aa17.1■□□□□ 0.33
CTCFL-203ENST00000422109 TNPO1Q92973 898 aaKnown RBP17.1■□□□□ 0.33
CTCFL-203ENST00000422109 CDC45O75419 566 aa17.1■□□□□ 0.33
CTCFL-203ENST00000422109 MTHFSDQ2M296 383 aaKnown RBP17.1■□□□□ 0.33
CTCFL-203ENST00000422109 SPATA31D1Q6ZQQ2 1576 aa17.09■□□□□ 0.33
CTCFL-203ENST00000422109 MSH6P52701 1360 aa17.09■□□□□ 0.33
CTCFL-203ENST00000422109 CDC42BPGQ6DT37 1551 aa17.09■□□□□ 0.33
CTCFL-203ENST00000422109 MAP3K19Q56UN5 1328 aa17.09■□□□□ 0.33
CTCFL-203ENST00000422109 AMOTL2Q9Y2J4 779 aa17.08■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 111.6 ms