RNA–Protein interactions for RNA: ENST00000421182.5

FN1-207, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 8,103 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-207ENST00000421182 FOXD4L4Q8WXT5 416 aaPredicted RBP13.27□□□□□ -0.28
FN1-207ENST00000421182 ACBD3Q9H3P7 528 aa13.27□□□□□ -0.28
FN1-207ENST00000421182 THOC2Q8NI27 1593 aaKnown RBP13.27□□□□□ -0.28
FN1-207ENST00000421182 ADGBQ8N7X0 1667 aa13.27□□□□□ -0.29
FN1-207ENST00000421182 CCAR2Q8N163 923 aaKnown RBP13.27□□□□□ -0.29
FN1-207ENST00000421182 ZPR1O75312 459 aa13.27□□□□□ -0.29
FN1-207ENST00000421182 TNNT3P45378 269 aaPredicted RBP13.27□□□□□ -0.29
FN1-207ENST00000421182 AK7Q96M32 723 aa13.27□□□□□ -0.29
FN1-207ENST00000421182 STIM1Q13586 685 aa13.26□□□□□ -0.29
FN1-207ENST00000421182 ZNF396Q96N95 335 aaPredicted RBP13.26□□□□□ -0.29
FN1-207ENST00000421182 RUFY1Q96T51 708 aa13.26□□□□□ -0.29
FN1-207ENST00000421182 DNAJC5BQ9UF47 199 aa13.26□□□□□ -0.29
FN1-207ENST00000421182 ZNF530Q6P9A1 599 aaPredicted RBP13.26□□□□□ -0.29
FN1-207ENST00000421182 MAGEC2Q9UBF1 373 aaPredicted RBP13.26□□□□□ -0.29
FN1-207ENST00000421182 CDKL5O76039 1030 aa13.26□□□□□ -0.29
FN1-207ENST00000421182 VPS37CA5D8V6 355 aaPredicted RBP13.26□□□□□ -0.29
FN1-207ENST00000421182 GCC1Q96CN9 775 aa13.26□□□□□ -0.29
FN1-207ENST00000421182 NAP1L1P55209 391 aaKnown RBP13.26□□□□□ -0.29
FN1-207ENST00000421182 DEKP35659 375 aaKnown RBP13.25□□□□□ -0.29
FN1-207ENST00000421182 IGHMBP2P38935 993 aaKnown RBP13.25□□□□□ -0.29
FN1-207ENST00000421182 DDX54Q8TDD1 881 aaKnown RBP13.25□□□□□ -0.29
FN1-207ENST00000421182 SURF6O75683 361 aaKnown RBP13.25□□□□□ -0.29
FN1-207ENST00000421182 RBM5P52756 815 aaKnown RBP eCLIP13.25□□□□□ -0.291e-19■■□□□ 13
FN1-207ENST00000421182 SMARCE1Q969G3 411 aa13.25□□□□□ -0.29
FN1-207ENST00000421182 BTBD11A6QL63 1104 aa13.25□□□□□ -0.29
FN1-207ENST00000421182 FILIP1LQ4L180 1135 aa13.25□□□□□ -0.29
FN1-207ENST00000421182 HOMER1Q86YM7 354 aa13.25□□□□□ -0.29
FN1-207ENST00000421182 AMOTQ4VCS5 1084 aa13.24□□□□□ -0.29
FN1-207ENST00000421182 SLF2Q8IX21 1173 aa13.24□□□□□ -0.29
FN1-207ENST00000421182 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.24□□□□□ -0.29
FN1-207ENST00000421182 CCP110O43303 1012 aa13.24□□□□□ -0.29
FN1-207ENST00000421182 PRKAR2BP31323 418 aa13.24□□□□□ -0.29
FN1-207ENST00000421182 HSP90AB3PQ58FF7 597 aa13.23□□□□□ -0.29
FN1-207ENST00000421182 HSP90AB2PQ58FF8 381 aa13.23□□□□□ -0.29
FN1-207ENST00000421182 CTNNA3Q9UI47 895 aa13.23□□□□□ -0.29
FN1-207ENST00000421182 CCDC61Q9Y6R9 512 aa13.23□□□□□ -0.29
FN1-207ENST00000421182 PRXQ9BXM0 1461 aa13.23□□□□□ -0.29
FN1-207ENST00000421182 KINO60870 393 aaKnown RBP13.23□□□□□ -0.29
FN1-207ENST00000421182 ZFYVE27Q5T4F4 411 aa13.23□□□□□ -0.29
FN1-207ENST00000421182 KRT18P05783 430 aaKnown RBP13.23□□□□□ -0.29
FN1-207ENST00000421182 TWISTNBQ3B726 338 aaPredicted RBP13.23□□□□□ -0.29
FN1-207ENST00000421182 WDR63Q8IWG1 891 aa13.23□□□□□ -0.29
FN1-207ENST00000421182 TEX35Q5T0J7 233 aa13.23□□□□□ -0.29
FN1-207ENST00000421182 PAF1Q8N7H5 531 aa13.23□□□□□ -0.29
FN1-207ENST00000421182 PDE4AP27815 886 aa13.22□□□□□ -0.29
FN1-207ENST00000421182 CFAP70Q5T0N1 1121 aa13.22□□□□□ -0.29
FN1-207ENST00000421182 ADAMTS12P58397 1594 aa13.22□□□□□ -0.29
FN1-207ENST00000421182 SOGA3Q5TF21 947 aa13.22□□□□□ -0.29
FN1-207ENST00000421182 SDF4Q9BRK5 362 aa13.22□□□□□ -0.29
FN1-207ENST00000421182 CCDC69A6NI79 296 aa13.22□□□□□ -0.29
FN1-207ENST00000421182 ARAP1Q96P48 1450 aa13.22□□□□□ -0.29
FN1-207ENST00000421182 ATP2B2Q01814 1243 aa13.22□□□□□ -0.29
FN1-207ENST00000421182 DACH1Q9UI36 760 aa13.22□□□□□ -0.29
FN1-207ENST00000421182 AKAP2Q9Y2D5 859 aa13.22□□□□□ -0.29
FN1-207ENST00000421182 SULT6B1Q6IMI4 303 aa13.21□□□□□ -0.29
FN1-207ENST00000421182 TNIP1Q15025 636 aa13.21□□□□□ -0.29
FN1-207ENST00000421182 GNAT3A8MTJ3 354 aa13.21□□□□□ -0.3
FN1-207ENST00000421182 MPHOSPH10O00566 681 aaKnown RBP13.21□□□□□ -0.3
FN1-207ENST00000421182 WDR62O43379 1518 aa13.2□□□□□ -0.3
FN1-207ENST00000421182 LRRCC1Q9C099 1032 aa13.2□□□□□ -0.3
FN1-207ENST00000421182 LNPKQ9C0E8 428 aa13.2□□□□□ -0.3
FN1-207ENST00000421182 TMOD3Q9NYL9 352 aa13.2□□□□□ -0.3
FN1-207ENST00000421182 MSH6P52701 1360 aa13.2□□□□□ -0.3
FN1-207ENST00000421182 DNAJC2Q99543 621 aaKnown RBP13.2□□□□□ -0.3
FN1-207ENST00000421182 RTN4Q9NQC3 1192 aaKnown RBP13.2□□□□□ -0.3
FN1-207ENST00000421182 EIF2AK4Q9P2K8 1649 aaKnown RBP13.2□□□□□ -0.3
FN1-207ENST00000421182 ARGLU1Q9NWB6 273 aaPredicted RBP13.2□□□□□ -0.3
FN1-207ENST00000421182 PDE3AQ14432 1141 aa13.2□□□□□ -0.3
FN1-207ENST00000421182 WASF1Q92558 559 aa13.2□□□□□ -0.3
FN1-207ENST00000421182 NOL7Q9UMY1 257 aaKnown RBP13.2□□□□□ -0.3
FN1-207ENST00000421182 ZNF608Q9ULD9 1512 aaPredicted RBP13.2□□□□□ -0.3
FN1-207ENST00000421182 C22orf23Q9BZE7 217 aa13.2□□□□□ -0.3
FN1-207ENST00000421182 KRT32Q14532 448 aa13.19□□□□□ -0.3
FN1-207ENST00000421182 BMP2KQ9NSY1 1161 aaPredicted RBP13.19□□□□□ -0.3
FN1-207ENST00000421182 CABP1Q9NZU7 370 aa13.19□□□□□ -0.3
FN1-207ENST00000421182 ZRSR2Q15696 482 aaKnown RBP13.19□□□□□ -0.3
FN1-207ENST00000421182 FOXD4L6Q3SYB3 417 aaPredicted RBP13.19□□□□□ -0.3
FN1-207ENST00000421182 FOXD4L3Q6VB84 417 aaPredicted RBP13.19□□□□□ -0.3
FN1-207ENST00000421182 ABCA5Q8WWZ7 1642 aa13.19□□□□□ -0.3
FN1-207ENST00000421182 FAM177BA6PVY3 158 aa13.19□□□□□ -0.3
FN1-207ENST00000421182 TOM1O60784 492 aa13.19□□□□□ -0.3
FN1-207ENST00000421182 AEBP1Q8IUX7 1158 aa13.19□□□□□ -0.3
FN1-207ENST00000421182 TCP11L2Q8N4U5 519 aa13.19□□□□□ -0.3
FN1-207ENST00000421182 SLC26A8Q96RN1 970 aa13.19□□□□□ -0.3
FN1-207ENST00000421182 CAVIN4Q5BKX8 364 aa13.19□□□□□ -0.3
FN1-207ENST00000421182 RRP12Q5JTH9 1297 aaKnown RBP13.19□□□□□ -0.3
FN1-207ENST00000421182 ZNHIT6Q9NWK9 470 aaKnown RBP13.18□□□□□ -0.3
FN1-207ENST00000421182 CEP126Q9P2H0 1117 aa13.18□□□□□ -0.3
FN1-207ENST00000421182 MAP3K1Q13233 1512 aa13.18□□□□□ -0.3
FN1-207ENST00000421182 FCHSD2O94868 740 aa13.18□□□□□ -0.3
FN1-207ENST00000421182 ZSCAN29Q8IWY8 852 aaPredicted RBP13.18□□□□□ -0.3
FN1-207ENST00000421182 CFAP43Q8NDM7 1665 aa13.18□□□□□ -0.3
FN1-207ENST00000421182 ZNF518AQ6AHZ1 1483 aa13.18□□□□□ -0.3
FN1-207ENST00000421182 MBD3O95983 291 aa13.18□□□□□ -0.3
FN1-207ENST00000421182 WDR7Q9Y4E6 1490 aa13.17□□□□□ -0.3
FN1-207ENST00000421182 TEX13AQ9BXU3 409 aaPredicted RBP13.17□□□□□ -0.3
FN1-207ENST00000421182 ERLIN2O94905 339 aa13.17□□□□□ -0.3
FN1-207ENST00000421182 SLC4A2P04920 1241 aa13.17□□□□□ -0.3
FN1-207ENST00000421182 RABEP1Q15276 862 aa13.17□□□□□ -0.3
FN1-207ENST00000421182 AMER1Q5JTC6 1135 aaPredicted RBP13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms