RNA–Protein interactions for RNA: ENST00000420508.1

AP000550.1-201, humanhuman

TSL 1 (best) BASIC

Gene AP000550.1, Length 4,833 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP000550.1-201ENST00000420508 SSH1Q8WYL5 1049 aa17.88■□□□□ 0.45
AP000550.1-201ENST00000420508 TTC21AQ8NDW8 1320 aa17.88■□□□□ 0.45
AP000550.1-201ENST00000420508 KDM5DQ9BY66 1539 aa17.88■□□□□ 0.45
AP000550.1-201ENST00000420508 SPATA31E1Q6ZUB1 1445 aa17.88■□□□□ 0.45
AP000550.1-201ENST00000420508 TNRQ92752 1358 aa17.88■□□□□ 0.45
AP000550.1-201ENST00000420508 GOLGA6L19H0YKK7 550 aa17.88■□□□□ 0.45
AP000550.1-201ENST00000420508 PER1O15534 1290 aaPredicted RBP17.87■□□□□ 0.45
AP000550.1-201ENST00000420508 RAB11FIP3O75154 756 aa17.87■□□□□ 0.45
AP000550.1-201ENST00000420508 TRAK2O60296 914 aa17.87■□□□□ 0.45
AP000550.1-201ENST00000420508 TPM3P06753 285 aa17.87■□□□□ 0.45
AP000550.1-201ENST00000420508 AMOTQ4VCS5 1084 aa17.87■□□□□ 0.45
AP000550.1-201ENST00000420508 ZNF530Q6P9A1 599 aaPredicted RBP17.87■□□□□ 0.45
AP000550.1-201ENST00000420508 GTF2E1P29083 439 aaPredicted RBP17.86■□□□□ 0.45
AP000550.1-201ENST00000420508 ANKRD1Q15327 319 aa17.86■□□□□ 0.45
AP000550.1-201ENST00000420508 TRIM29Q14134 588 aa17.86■□□□□ 0.45
AP000550.1-201ENST00000420508 NEO1Q92859 1461 aa17.86■□□□□ 0.45
AP000550.1-201ENST00000420508 ADCY10Q96PN6 1610 aa17.86■□□□□ 0.45
AP000550.1-201ENST00000420508 MBD5Q9P267 1494 aa17.86■□□□□ 0.45
AP000550.1-201ENST00000420508 AKAP17AQ02040 695 aaKnown RBP17.86■□□□□ 0.45
AP000550.1-201ENST00000420508 HOOK1Q9UJC3 728 aaKnown RBP17.85■□□□□ 0.45
AP000550.1-201ENST00000420508 CCDC9Q9Y3X0 531 aaKnown RBP17.85■□□□□ 0.45
AP000550.1-201ENST00000420508 AEBP1Q8IUX7 1158 aa17.85■□□□□ 0.45
AP000550.1-201ENST00000420508 PLXNC1O60486 1568 aa17.85■□□□□ 0.45
AP000550.1-201ENST00000420508 ZMYM4Q5VZL5 1548 aa17.85■□□□□ 0.45
AP000550.1-201ENST00000420508 HDAC1Q13547 482 aaPredicted RBP17.84■□□□□ 0.45
AP000550.1-201ENST00000420508 RRS1Q15050 365 aaKnown RBP17.84■□□□□ 0.45
AP000550.1-201ENST00000420508 PREX2Q70Z35 1606 aa17.84■□□□□ 0.45
AP000550.1-201ENST00000420508 SBNO2Q9Y2G9 1366 aa17.84■□□□□ 0.45
AP000550.1-201ENST00000420508 CPLX1O14810 134 aa17.83■□□□□ 0.45
AP000550.1-201ENST00000420508 WAPLQ7Z5K2 1190 aa17.83■□□□□ 0.45
AP000550.1-201ENST00000420508 TAOK2Q9UL54 1235 aa17.83■□□□□ 0.45
AP000550.1-201ENST00000420508 RIMS2Q9UQ26 1411 aa17.83■□□□□ 0.45
AP000550.1-201ENST00000420508 BECN2A8MW95 431 aa17.83■□□□□ 0.45
AP000550.1-201ENST00000420508 MCTP1Q6DN14 999 aa17.83■□□□□ 0.45
AP000550.1-201ENST00000420508 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.83■□□□□ 0.44
AP000550.1-201ENST00000420508 AMOTL1Q8IY63 956 aa17.83■□□□□ 0.44
AP000550.1-201ENST00000420508 PLEKHH1Q9ULM0 1364 aa17.82■□□□□ 0.44
AP000550.1-201ENST00000420508 BLMP54132 1417 aaPredicted RBP17.82■□□□□ 0.44
AP000550.1-201ENST00000420508 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.82■□□□□ 0.44
AP000550.1-201ENST00000420508 FSD1Q9BTV5 496 aa17.82■□□□□ 0.44
AP000550.1-201ENST00000420508 SLC26A8Q96RN1 970 aa17.82■□□□□ 0.44
AP000550.1-201ENST00000420508 NEK4P51957 841 aa17.81■□□□□ 0.44
AP000550.1-201ENST00000420508 C20orf194Q5TEA3 1177 aa17.81■□□□□ 0.44
AP000550.1-201ENST00000420508 C1orf115Q9H7X2 142 aa17.81■□□□□ 0.44
AP000550.1-201ENST00000420508 FOXD4L5Q5VV16 416 aaPredicted RBP17.81■□□□□ 0.44
AP000550.1-201ENST00000420508 NUTM2GQ5VZR2 741 aa17.81■□□□□ 0.44
AP000550.1-201ENST00000420508 FOXD4L4Q8WXT5 416 aaPredicted RBP17.81■□□□□ 0.44
AP000550.1-201ENST00000420508 ZSCAN31Q96LW9 406 aaPredicted RBP17.81■□□□□ 0.44
AP000550.1-201ENST00000420508 FRAT2O75474 233 aaPredicted RBP17.81■□□□□ 0.44
AP000550.1-201ENST00000420508 TAF7Q15545 349 aaPredicted RBP17.81■□□□□ 0.44
AP000550.1-201ENST00000420508 NME9Q86XW9 330 aa17.81■□□□□ 0.44
AP000550.1-201ENST00000420508 TOMM22Q9NS69 142 aa17.81■□□□□ 0.44
AP000550.1-201ENST00000420508 WDR33Q9C0J8 1336 aaKnown RBP17.8■□□□□ 0.44
AP000550.1-201ENST00000420508 TRIM27P14373 513 aa17.8■□□□□ 0.44
AP000550.1-201ENST00000420508 FBXO31Q5XUX0 539 aaPredicted RBP17.8■□□□□ 0.44
AP000550.1-201ENST00000420508 BMP2KLQ5H9B9 411 aa17.79■□□□□ 0.44
AP000550.1-201ENST00000420508 SOS1Q07889 1333 aaPredicted RBP17.79■□□□□ 0.44
AP000550.1-201ENST00000420508 RALYLQ86SE5 291 aaKnown RBP17.79■□□□□ 0.44
AP000550.1-201ENST00000420508 NOL10Q9BSC4 688 aaKnown RBP17.79■□□□□ 0.44
AP000550.1-201ENST00000420508 ABCC1P33527 1531 aa17.79■□□□□ 0.44
AP000550.1-201ENST00000420508 CCDC39Q9UFE4 941 aa17.79■□□□□ 0.44
AP000550.1-201ENST00000420508 RNF123Q5XPI4 1314 aa17.78■□□□□ 0.44
AP000550.1-201ENST00000420508 DHX8Q14562 1220 aaKnown RBP17.78■□□□□ 0.44
AP000550.1-201ENST00000420508 CCDC73Q6ZRK6 1079 aa17.78■□□□□ 0.44
AP000550.1-201ENST00000420508 KDM5CP41229 1560 aa17.78■□□□□ 0.44
AP000550.1-201ENST00000420508 KDM5AP29375 1690 aaKnown RBP17.78■□□□□ 0.44
AP000550.1-201ENST00000420508 SAMD9LQ8IVG5 1584 aa17.78■□□□□ 0.44
AP000550.1-201ENST00000420508 DHX16O60231 1041 aaKnown RBP17.78■□□□□ 0.44
AP000550.1-201ENST00000420508 KIF6Q6ZMV9 814 aa17.78■□□□□ 0.44
AP000550.1-201ENST00000420508 KIF1BPQ96EK5 621 aa17.78■□□□□ 0.44
AP000550.1-201ENST00000420508 VPS37CA5D8V6 355 aaPredicted RBP17.78■□□□□ 0.44
AP000550.1-201ENST00000420508 AMOTL2Q9Y2J4 779 aa17.78■□□□□ 0.44
AP000550.1-201ENST00000420508 FYB1O15117 783 aa17.77■□□□□ 0.44
AP000550.1-201ENST00000420508 CCDC173Q0VFZ6 552 aa17.77■□□□□ 0.44
AP000550.1-201ENST00000420508 AIMP1Q12904 312 aaKnown RBP17.77■□□□□ 0.44
AP000550.1-201ENST00000420508 KRT32Q14532 448 aa17.77■□□□□ 0.44
AP000550.1-201ENST00000420508 BICD2Q8TD16 824 aa17.77■□□□□ 0.44
AP000550.1-201ENST00000420508 ERICH2A1L162 156 aa17.77■□□□□ 0.44
AP000550.1-201ENST00000420508 NASPP49321 788 aaPredicted RBP17.77■□□□□ 0.44
AP000550.1-201ENST00000420508 CYP46A1Q9Y6A2 500 aa17.77■□□□□ 0.44
AP000550.1-201ENST00000420508 BTBD11A6QL63 1104 aa17.77■□□□□ 0.43
AP000550.1-201ENST00000420508 SASS6Q6UVJ0 657 aa17.77■□□□□ 0.43
AP000550.1-201ENST00000420508 TRPM2O94759 1503 aa17.77■□□□□ 0.43
AP000550.1-201ENST00000420508 EMILIN1Q9Y6C2 1016 aa17.76■□□□□ 0.43
AP000550.1-201ENST00000420508 MYOM2P54296 1465 aa17.76■□□□□ 0.43
AP000550.1-201ENST00000420508 ARAP3Q8WWN8 1544 aa17.76■□□□□ 0.43
AP000550.1-201ENST00000420508 PHF8Q9UPP1 1060 aa17.76■□□□□ 0.43
AP000550.1-201ENST00000420508 PPIP5K1Q6PFW1 1433 aa17.76■□□□□ 0.43
AP000550.1-201ENST00000420508 MCM4P33991 863 aa17.76■□□□□ 0.43
AP000550.1-201ENST00000420508 SAFBQ15424 915 aaKnown RBP eCLIP17.76■□□□□ 0.43
AP000550.1-201ENST00000420508 TPM1P09493 284 aa17.75■□□□□ 0.43
AP000550.1-201ENST00000420508 TBC1D2BQ9UPU7 963 aa17.75■□□□□ 0.43
AP000550.1-201ENST00000420508 YTHDC2Q9H6S0 1430 aaKnown RBP17.75■□□□□ 0.43
AP000550.1-201ENST00000420508 NAT10Q9H0A0 1025 aaKnown RBP17.75■□□□□ 0.43
AP000550.1-201ENST00000420508 CABP4P57796 275 aa17.74■□□□□ 0.43
AP000550.1-201ENST00000420508 SHROOM2Q13796 1616 aa17.74■□□□□ 0.43
AP000550.1-201ENST00000420508 NPATQ14207 1427 aa17.74■□□□□ 0.43
AP000550.1-201ENST00000420508 GLRX3O76003 335 aaKnown RBP17.74■□□□□ 0.43
AP000550.1-201ENST00000420508 RASSF8Q8NHQ8 419 aa17.74■□□□□ 0.43
AP000550.1-201ENST00000420508 ATP10AO60312 1499 aa17.74■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms