RNA–Protein interactions for RNA: ENST00000420239.6

CHD2-202, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 1 (best) BASIC

Gene CHD2, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-202ENST00000420239 C19orf67A6NJJ6 358 aa7.65□□□□□ -1.18
CHD2-202ENST00000420239 PRIM1P49642 420 aaKnown RBP7.65□□□□□ -1.18
CHD2-202ENST00000420239 DDX12PQ92771 950 aa7.65□□□□□ -1.18
CHD2-202ENST00000420239 TNPO1Q92973 898 aaKnown RBP7.65□□□□□ -1.18
CHD2-202ENST00000420239 TMEM121BQ9BXQ6 578 aaPredicted RBP7.65□□□□□ -1.18
CHD2-202ENST00000420239 R3HCC1Q9Y3T6 440 aaKnown RBP7.65□□□□□ -1.18
CHD2-202ENST00000420239 KNSTRNQ9Y448 316 aa7.65□□□□□ -1.18
CHD2-202ENST00000420239 KIAA1210Q9ULL0 1709 aa7.65□□□□□ -1.18
CHD2-202ENST00000420239 DUOX2Q9NRD8 1548 aa7.65□□□□□ -1.19
CHD2-202ENST00000420239 CDC42BPBQ9Y5S2 1711 aa7.65□□□□□ -1.19
CHD2-202ENST00000420239 SAMD9LQ8IVG5 1584 aa7.64□□□□□ -1.19
CHD2-202ENST00000420239 GALR2O43603 387 aaPredicted RBP7.64□□□□□ -1.19
CHD2-202ENST00000420239 ONECUT3O60422 494 aaPredicted RBP7.64□□□□□ -1.19
CHD2-202ENST00000420239 TTLL12Q14166 644 aaPredicted RBP7.64□□□□□ -1.19
CHD2-202ENST00000420239 CCDC146Q8IYE0 955 aa7.64□□□□□ -1.19
CHD2-202ENST00000420239 C22orf23Q9BZE7 217 aa7.64□□□□□ -1.19
CHD2-202ENST00000420239 ZNF777Q9ULD5 760 aaPredicted RBP7.64□□□□□ -1.19
CHD2-202ENST00000420239 PCDHB15Q9Y5E8 787 aa7.64□□□□□ -1.19
CHD2-202ENST00000420239 PREX2Q70Z35 1606 aa7.64□□□□□ -1.19
CHD2-202ENST00000420239 IFT140Q96RY7 1462 aa7.64□□□□□ -1.19
CHD2-202ENST00000420239 SPHKAPQ2M3C7 1700 aa7.64□□□□□ -1.19
CHD2-202ENST00000420239 UQCRHLA0A096LP55 91 aa7.64□□□□□ -1.19
CHD2-202ENST00000420239 UQCRHP07919 91 aa7.64□□□□□ -1.19
CHD2-202ENST00000420239 CDCA8Q53HL2 280 aa7.64□□□□□ -1.19
CHD2-202ENST00000420239 EIF2AK3Q9NZJ5 1116 aaKnown RBP7.64□□□□□ -1.19
CHD2-202ENST00000420239 KANK1Q14678 1352 aa7.64□□□□□ -1.19
CHD2-202ENST00000420239 FCHSD2O94868 740 aa7.63□□□□□ -1.19
CHD2-202ENST00000420239 NASPP49321 788 aaPredicted RBP7.63□□□□□ -1.19
CHD2-202ENST00000420239 MFAP1P55081 439 aaKnown RBP7.63□□□□□ -1.19
CHD2-202ENST00000420239 STAC3Q96MF2 364 aa7.63□□□□□ -1.19
CHD2-202ENST00000420239 TNNQ9UQP3 1299 aa7.63□□□□□ -1.19
CHD2-202ENST00000420239 KDM5AP29375 1690 aaKnown RBP7.63□□□□□ -1.19
CHD2-202ENST00000420239 ATP10BO94823 1461 aa7.63□□□□□ -1.19
CHD2-202ENST00000420239 CEP152O94986 1710 aa7.63□□□□□ -1.19
CHD2-202ENST00000420239 APAF1O14727 1248 aa7.63□□□□□ -1.19
CHD2-202ENST00000420239 DMTNQ08495 405 aa7.63□□□□□ -1.19
CHD2-202ENST00000420239 BOLA1Q9Y3E2 137 aa7.63□□□□□ -1.19
CHD2-202ENST00000420239 POLR3AO14802 1390 aaPredicted RBP7.62□□□□□ -1.19
CHD2-202ENST00000420239 SCAF11Q99590 1463 aaKnown RBP7.62□□□□□ -1.19
CHD2-202ENST00000420239 MRC2Q9UBG0 1479 aa7.62□□□□□ -1.19
CHD2-202ENST00000420239 TTC37Q6PGP7 1564 aa7.62□□□□□ -1.19
CHD2-202ENST00000420239 APBB1O00213 710 aa7.62□□□□□ -1.19
CHD2-202ENST00000420239 FLIIQ13045 1269 aa7.62□□□□□ -1.19
CHD2-202ENST00000420239 RAB3GAP1Q15042 981 aa7.62□□□□□ -1.19
CHD2-202ENST00000420239 HSCBQ8IWL3 235 aa7.62□□□□□ -1.19
CHD2-202ENST00000420239 SHPRHQ149N8 1683 aa7.62□□□□□ -1.19
CHD2-202ENST00000420239 NEURL4Q96JN8 1562 aa7.62□□□□□ -1.19
CHD2-202ENST00000420239 ZNF500O60304 480 aaPredicted RBP7.62□□□□□ -1.19
CHD2-202ENST00000420239 RLBP1P12271 317 aa7.62□□□□□ -1.19
CHD2-202ENST00000420239 PTMSP20962 102 aa7.62□□□□□ -1.19
CHD2-202ENST00000420239 MSNP26038 577 aaKnown RBP7.62□□□□□ -1.19
CHD2-202ENST00000420239 XPCQ01831 940 aaPredicted RBP7.62□□□□□ -1.19
CHD2-202ENST00000420239 UTP14CQ5TAP6 766 aaKnown RBP7.62□□□□□ -1.19
CHD2-202ENST00000420239 SMC5Q8IY18 1101 aa7.62□□□□□ -1.19
CHD2-202ENST00000420239 OXER1Q8TDS5 423 aa7.62□□□□□ -1.19
CHD2-202ENST00000420239 ARHGAP31Q2M1Z3 1444 aa7.61□□□□□ -1.19
CHD2-202ENST00000420239 PLEKHD1A6NEE1 506 aa7.61□□□□□ -1.19
CHD2-202ENST00000420239 PTGER2P43116 358 aa7.61□□□□□ -1.19
CHD2-202ENST00000420239 IRX5P78411 483 aaPredicted RBP7.61□□□□□ -1.19
CHD2-202ENST00000420239 PDE4CQ08493 712 aa7.61□□□□□ -1.19
CHD2-202ENST00000420239 GIGYF2Q6Y7W6 1299 aaKnown RBP7.61□□□□□ -1.19
CHD2-202ENST00000420239 SNX21Q969T3 373 aa7.61□□□□□ -1.19
CHD2-202ENST00000420239 REPIN1Q9BWE0 567 aaKnown RBP7.61□□□□□ -1.19
CHD2-202ENST00000420239 IQSEC2Q5JU85 1478 aa7.61□□□□□ -1.19
CHD2-202ENST00000420239 DYNC1I1O14576 645 aa7.6□□□□□ -1.19
CHD2-202ENST00000420239 RARSP54136 660 aaKnown RBP7.6□□□□□ -1.19
CHD2-202ENST00000420239 PTGDRQ13258 359 aa7.6□□□□□ -1.19
CHD2-202ENST00000420239 SKOR2Q2VWA4 1001 aaPredicted RBP7.6□□□□□ -1.19
CHD2-202ENST00000420239 TMEM92Q6UXU6 159 aa7.6□□□□□ -1.19
CHD2-202ENST00000420239 RWDD1Q9H446 243 aaPredicted RBP7.6□□□□□ -1.19
CHD2-202ENST00000420239 GOPCQ9HD26 462 aa7.6□□□□□ -1.19
CHD2-202ENST00000420239 CARMIL2Q6F5E8 1435 aa7.6□□□□□ -1.19
CHD2-202ENST00000420239 IBTKQ9P2D0 1353 aaPredicted RBP7.6□□□□□ -1.19
CHD2-202ENST00000420239 ZSCAN20P17040 1043 aaPredicted RBP7.6□□□□□ -1.19
CHD2-202ENST00000420239 CANXP27824 592 aaKnown RBP7.6□□□□□ -1.19
CHD2-202ENST00000420239 GTF2E1P29083 439 aaPredicted RBP7.6□□□□□ -1.19
CHD2-202ENST00000420239 GBP4Q96PP9 640 aa7.6□□□□□ -1.19
CHD2-202ENST00000420239 ATN1P54259 1190 aaPredicted RBP7.59□□□□□ -1.19
CHD2-202ENST00000420239 RGL3Q3MIN7 710 aa7.59□□□□□ -1.19
CHD2-202ENST00000420239 WWC1Q8IX03 1113 aa7.59□□□□□ -1.19
CHD2-202ENST00000420239 NOL7Q9UMY1 257 aaKnown RBP7.59□□□□□ -1.19
CHD2-202ENST00000420239 HNRNPMP52272 730 aaKnown RBP eCLIP7.59□□□□□ -1.191e-9■■■■■ 30.2
CHD2-202ENST00000420239 CCDC27Q2M243 656 aa7.59□□□□□ -1.19
CHD2-202ENST00000420239 HS1BP3Q53T59 392 aa7.59□□□□□ -1.19
CHD2-202ENST00000420239 MTERF4Q7Z6M4 381 aaKnown RBP7.59□□□□□ -1.19
CHD2-202ENST00000420239 WDR63Q8IWG1 891 aa7.59□□□□□ -1.19
CHD2-202ENST00000420239 PDLIM2Q96JY6 352 aa7.59□□□□□ -1.19
CHD2-202ENST00000420239 CCDC94Q9BW85 323 aaPredicted RBP7.59□□□□□ -1.19
CHD2-202ENST00000420239 SSFA2P28290 1259 aa7.58□□□□□ -1.2
CHD2-202ENST00000420239 RBM25P49756 843 aaKnown RBP7.58□□□□□ -1.2
CHD2-202ENST00000420239 CLEC17AQ6ZS10 378 aa7.58□□□□□ -1.2
CHD2-202ENST00000420239 MYO3AQ8NEV4 1616 aa7.58□□□□□ -1.2
CHD2-202ENST00000420239 CD2BP2O95400 341 aaKnown RBP7.58□□□□□ -1.2
CHD2-202ENST00000420239 SASS6Q6UVJ0 657 aa7.58□□□□□ -1.2
CHD2-202ENST00000420239 OCEL1Q9H607 264 aa7.58□□□□□ -1.2
CHD2-202ENST00000420239 TRPM2O94759 1503 aa7.57□□□□□ -1.2
CHD2-202ENST00000420239 HSP90AB1P08238 724 aaKnown RBP7.57□□□□□ -1.2
CHD2-202ENST00000420239 ZNF445P59923 1031 aa7.57□□□□□ -1.2
CHD2-202ENST00000420239 HDAC1Q13547 482 aaPredicted RBP7.57□□□□□ -1.2
CHD2-202ENST00000420239 RBSNQ9H1K0 784 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms