RNA–Protein interactions for RNA: ENST00000419533.1

UBR4-206, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 5,583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-206ENST00000419533 ARHGEF12Q9NZN5 1544 aa10.3□□□□□ -0.76
UBR4-206ENST00000419533 ERVK-7P63135 1459 aa10.3□□□□□ -0.76
UBR4-206ENST00000419533 DHX16O60231 1041 aaKnown RBP10.3□□□□□ -0.76
UBR4-206ENST00000419533 NOC3LQ8WTT2 800 aaKnown RBP10.3□□□□□ -0.76
UBR4-206ENST00000419533 UBTFL1P0CB47 393 aaPredicted RBP10.3□□□□□ -0.76
UBR4-206ENST00000419533 RBM42Q9BTD8 480 aaKnown RBP10.3□□□□□ -0.76
UBR4-206ENST00000419533 ANO2Q9NQ90 1003 aa10.29□□□□□ -0.76
UBR4-206ENST00000419533 PTPRMP28827 1452 aa10.29□□□□□ -0.76
UBR4-206ENST00000419533 PLEKHG1Q9ULL1 1385 aa10.29□□□□□ -0.76
UBR4-206ENST00000419533 CPLX1O14810 134 aa10.29□□□□□ -0.76
UBR4-206ENST00000419533 CEP89Q96ST8 783 aa10.29□□□□□ -0.76
UBR4-206ENST00000419533 GZF1Q9H116 711 aaPredicted RBP10.29□□□□□ -0.76
UBR4-206ENST00000419533 SPG7Q9UQ90 795 aa10.29□□□□□ -0.76
UBR4-206ENST00000419533 AGLP35573 1532 aa10.29□□□□□ -0.76
UBR4-206ENST00000419533 TPD52L1Q16890 204 aaPredicted RBP10.28□□□□□ -0.76
UBR4-206ENST00000419533 EXOC6Q8TAG9 804 aa10.28□□□□□ -0.76
UBR4-206ENST00000419533 MAP3K4Q9Y6R4 1608 aa10.28□□□□□ -0.76
UBR4-206ENST00000419533 BRD4O60885 1362 aaPredicted RBP10.28□□□□□ -0.76
UBR4-206ENST00000419533 PNISRQ8TF01 805 aaKnown RBP10.28□□□□□ -0.76
UBR4-206ENST00000419533 NEUROD6Q96NK8 337 aa10.28□□□□□ -0.76
UBR4-206ENST00000419533 PLXNC1O60486 1568 aa10.28□□□□□ -0.76
UBR4-206ENST00000419533 TPM2P07951 284 aa10.28□□□□□ -0.76
UBR4-206ENST00000419533 NFXL1Q6ZNB6 911 aa10.28□□□□□ -0.76
UBR4-206ENST00000419533 SLAIN2Q9P270 581 aa10.28□□□□□ -0.76
UBR4-206ENST00000419533 NINLQ9Y2I6 1382 aa10.27□□□□□ -0.76
UBR4-206ENST00000419533 CERKQ8TCT0 537 aa10.27□□□□□ -0.77
UBR4-206ENST00000419533 CCDC47Q96A33 483 aaKnown RBP10.27□□□□□ -0.77
UBR4-206ENST00000419533 GNAI3P08754 354 aa10.27□□□□□ -0.77
UBR4-206ENST00000419533 CABP4P57796 275 aa10.27□□□□□ -0.77
UBR4-206ENST00000419533 MCTP1Q6DN14 999 aa10.27□□□□□ -0.77
UBR4-206ENST00000419533 PRKAR2BP31323 418 aa10.27□□□□□ -0.77
UBR4-206ENST00000419533 ZC3H6P61129 1189 aaKnown RBP10.27□□□□□ -0.77
UBR4-206ENST00000419533 ARHGAP31Q2M1Z3 1444 aa10.27□□□□□ -0.77
UBR4-206ENST00000419533 ABCC3O15438 1527 aa10.27□□□□□ -0.77
UBR4-206ENST00000419533 DDX11L8A8MPP1 907 aa10.26□□□□□ -0.77
UBR4-206ENST00000419533 GOLGA6L3A6NEY3 463 aa10.26□□□□□ -0.77
UBR4-206ENST00000419533 TPM3P06753 285 aa10.26□□□□□ -0.77
UBR4-206ENST00000419533 INTS3Q68E01 1043 aaKnown RBP10.26□□□□□ -0.77
UBR4-206ENST00000419533 TRPM2O94759 1503 aa10.26□□□□□ -0.77
UBR4-206ENST00000419533 PIK3R4Q99570 1358 aa10.26□□□□□ -0.77
UBR4-206ENST00000419533 CCDC27Q2M243 656 aa10.25□□□□□ -0.77
UBR4-206ENST00000419533 FOXD4L5Q5VV16 416 aaPredicted RBP10.25□□□□□ -0.77
UBR4-206ENST00000419533 FOXD4L4Q8WXT5 416 aaPredicted RBP10.25□□□□□ -0.77
UBR4-206ENST00000419533 C8orf37Q96NL8 207 aa10.25□□□□□ -0.77
UBR4-206ENST00000419533 LTKP29376 864 aa10.25□□□□□ -0.77
UBR4-206ENST00000419533 PPP2R1AP30153 589 aa10.25□□□□□ -0.77
UBR4-206ENST00000419533 WASHC4Q2M389 1173 aa10.25□□□□□ -0.77
UBR4-206ENST00000419533 TSR1Q2NL82 804 aaKnown RBP10.25□□□□□ -0.77
UBR4-206ENST00000419533 TBC1D2BQ9UPU7 963 aa10.25□□□□□ -0.77
UBR4-206ENST00000419533 TCP11L2Q8N4U5 519 aa10.25□□□□□ -0.77
UBR4-206ENST00000419533 DIP2CQ9Y2E4 1556 aa10.25□□□□□ -0.77
UBR4-206ENST00000419533 PES1O00541 588 aaKnown RBP10.25□□□□□ -0.77
UBR4-206ENST00000419533 RALYLQ86SE5 291 aaKnown RBP10.25□□□□□ -0.77
UBR4-206ENST00000419533 ANO8Q9HCE9 1232 aaPredicted RBP10.25□□□□□ -0.77
UBR4-206ENST00000419533 ZMYM4Q5VZL5 1548 aa10.24□□□□□ -0.77
UBR4-206ENST00000419533 CDC42BPBQ9Y5S2 1711 aa10.24□□□□□ -0.77
UBR4-206ENST00000419533 TTC21AQ8NDW8 1320 aa10.24□□□□□ -0.77
UBR4-206ENST00000419533 ZNF530Q6P9A1 599 aaPredicted RBP10.24□□□□□ -0.77
UBR4-206ENST00000419533 SLC12A5Q9H2X9 1139 aa10.24□□□□□ -0.77
UBR4-206ENST00000419533 TMEM94Q12767 1356 aa10.23□□□□□ -0.77
UBR4-206ENST00000419533 DDX54Q8TDD1 881 aaKnown RBP10.23□□□□□ -0.77
UBR4-206ENST00000419533 EIF2AK4Q9P2K8 1649 aaKnown RBP10.23□□□□□ -0.77
UBR4-206ENST00000419533 ADAMTS8Q9UP79 889 aa10.23□□□□□ -0.77
UBR4-206ENST00000419533 YTHDC2Q9H6S0 1430 aaKnown RBP10.23□□□□□ -0.77
UBR4-206ENST00000419533 TPM1P09493 284 aa10.23□□□□□ -0.77
UBR4-206ENST00000419533 CCDC43Q96MW1 224 aaKnown RBP10.23□□□□□ -0.77
UBR4-206ENST00000419533 HOOK1Q9UJC3 728 aaKnown RBP10.23□□□□□ -0.77
UBR4-206ENST00000419533 RIMS1Q86UR5 1692 aaKnown RBP10.23□□□□□ -0.77
UBR4-206ENST00000419533 FAM177BA6PVY3 158 aa10.23□□□□□ -0.77
UBR4-206ENST00000419533 PDE4AP27815 886 aa10.23□□□□□ -0.77
UBR4-206ENST00000419533 SAFBQ15424 915 aaKnown RBP eCLIP10.23□□□□□ -0.77
UBR4-206ENST00000419533 SIRT1Q96EB6 747 aa10.23□□□□□ -0.77
UBR4-206ENST00000419533 KDM5CP41229 1560 aa10.23□□□□□ -0.77
UBR4-206ENST00000419533 SULT6B1Q6IMI4 303 aa10.23□□□□□ -0.77
UBR4-206ENST00000419533 ERC1Q8IUD2 1116 aa10.23□□□□□ -0.77
UBR4-206ENST00000419533 CLASRPQ8N2M8 674 aaKnown RBP10.23□□□□□ -0.77
UBR4-206ENST00000419533 PRM3Q9NNZ6 103 aa10.23□□□□□ -0.77
UBR4-206ENST00000419533 GNL3LQ9NVN8 582 aaKnown RBP10.23□□□□□ -0.77
UBR4-206ENST00000419533 ZNF335Q9H4Z2 1342 aaPredicted RBP10.22□□□□□ -0.77
UBR4-206ENST00000419533 GOLGA6L19H0YKK7 550 aa10.22□□□□□ -0.77
UBR4-206ENST00000419533 SKOR2Q2VWA4 1001 aaPredicted RBP10.22□□□□□ -0.77
UBR4-206ENST00000419533 TWISTNBQ3B726 338 aaPredicted RBP10.22□□□□□ -0.77
UBR4-206ENST00000419533 CNTROBQ8N137 903 aa10.22□□□□□ -0.77
UBR4-206ENST00000419533 FYB1O15117 783 aa10.22□□□□□ -0.77
UBR4-206ENST00000419533 RSPH6AQ9H0K4 717 aa10.22□□□□□ -0.77
UBR4-206ENST00000419533 ACEP12821 1306 aa10.22□□□□□ -0.77
UBR4-206ENST00000419533 NBPF8Q3BBV2 869 aa10.21□□□□□ -0.77
UBR4-206ENST00000419533 BECN2A8MW95 431 aa10.21□□□□□ -0.77
UBR4-206ENST00000419533 ARHGEF10O15013 1369 aa10.21□□□□□ -0.77
UBR4-206ENST00000419533 SLC3A2P08195 630 aaKnown RBP10.21□□□□□ -0.78
UBR4-206ENST00000419533 HDGFL1Q5TGJ6 251 aa10.21□□□□□ -0.78
UBR4-206ENST00000419533 ANKRD20A12PQ8NF67 263 aa10.2□□□□□ -0.78
UBR4-206ENST00000419533 BRMS1Q9HCU9 246 aa10.2□□□□□ -0.78
UBR4-206ENST00000419533 CNNM1Q9NRU3 951 aa10.2□□□□□ -0.78
UBR4-206ENST00000419533 FSD1Q9BTV5 496 aa10.2□□□□□ -0.78
UBR4-206ENST00000419533 KDM4FA0A1W2PPD8 638 aa10.2□□□□□ -0.78
UBR4-206ENST00000419533 HIP1O00291 1037 aa10.2□□□□□ -0.78
UBR4-206ENST00000419533 SART3Q15020 963 aaKnown RBP10.2□□□□□ -0.78
UBR4-206ENST00000419533 EXOC5O00471 708 aa10.2□□□□□ -0.78
UBR4-206ENST00000419533 SURF6O75683 361 aaKnown RBP10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 112.8 ms