RNA–Protein interactions for RNA: ENST00000419220.1

LINC02539-202, Transcript of long intergenic non-protein coding RNA 2539, humanhuman

TSL 2

Gene LINC02539, Length 703 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02539-202ENST00000419220 YTHDC2Q9H6S0 1430 aaKnown RBP9.49□□□□□ -0.89
LINC02539-202ENST00000419220 TMEM132EQ6IEE7 984 aa9.49□□□□□ -0.89
LINC02539-202ENST00000419220 MS4A4AQ96JQ5 239 aa9.49□□□□□ -0.89
LINC02539-202ENST00000419220 ROCK2O75116 1388 aaKnown RBP9.49□□□□□ -0.89
LINC02539-202ENST00000419220 NRXN3Q9Y4C0 1643 aa9.49□□□□□ -0.89
LINC02539-202ENST00000419220 FAM135BQ49AJ0 1406 aa9.48□□□□□ -0.89
LINC02539-202ENST00000419220 PIP4K2BP78356 416 aa9.48□□□□□ -0.89
LINC02539-202ENST00000419220 NBR1Q14596 966 aa9.48□□□□□ -0.89
LINC02539-202ENST00000419220 SLAIN2Q9P270 581 aa9.48□□□□□ -0.89
LINC02539-202ENST00000419220 TRAK1Q9UPV9 953 aa9.48□□□□□ -0.89
LINC02539-202ENST00000419220 DCCP43146 1447 aa9.48□□□□□ -0.89
LINC02539-202ENST00000419220 PRAG1Q86YV5 1406 aa9.48□□□□□ -0.89
LINC02539-202ENST00000419220 CARD11Q9BXL7 1154 aa9.47□□□□□ -0.89
LINC02539-202ENST00000419220 XRN1Q8IZH2 1706 aaKnown RBP9.46□□□□□ -0.89
LINC02539-202ENST00000419220 STRCP1A6NGW2 1772 aa9.46□□□□□ -0.9
LINC02539-202ENST00000419220 TECPR2O15040 1411 aa9.46□□□□□ -0.9
LINC02539-202ENST00000419220 KNDC1Q76NI1 1749 aa9.45□□□□□ -0.9
LINC02539-202ENST00000419220 IFFO2Q5TF58 517 aa9.45□□□□□ -0.9
LINC02539-202ENST00000419220 PRAM1Q96QH2 718 aa9.45□□□□□ -0.9
LINC02539-202ENST00000419220 PTPRUQ92729 1446 aa9.45□□□□□ -0.9
LINC02539-202ENST00000419220 ADGRL3Q9HAR2 1447 aa9.45□□□□□ -0.9
LINC02539-202ENST00000419220 DLC1Q96QB1 1528 aa9.45□□□□□ -0.9
LINC02539-202ENST00000419220 SETD1AO15047 1707 aaKnown RBP9.45□□□□□ -0.9
LINC02539-202ENST00000419220 SLC34A2O95436 690 aa9.44□□□□□ -0.9
LINC02539-202ENST00000419220 CENPJQ9HC77 1338 aaPredicted RBP9.44□□□□□ -0.9
LINC02539-202ENST00000419220 ROBO2Q9HCK4 1378 aa9.43□□□□□ -0.9
LINC02539-202ENST00000419220 TPRNQ4KMQ1 711 aa9.43□□□□□ -0.9
LINC02539-202ENST00000419220 CDCA8Q53HL2 280 aa9.43□□□□□ -0.9
LINC02539-202ENST00000419220 WAPLQ7Z5K2 1190 aa9.43□□□□□ -0.9
LINC02539-202ENST00000419220 KCTD12Q96CX2 325 aaKnown RBP9.43□□□□□ -0.9
LINC02539-202ENST00000419220 RBM33Q96EV2 1170 aaKnown RBP9.43□□□□□ -0.9
LINC02539-202ENST00000419220 WDR70Q9NW82 654 aa9.43□□□□□ -0.9
LINC02539-202ENST00000419220 PCDHGA4Q9Y5G9 962 aa9.43□□□□□ -0.9
LINC02539-202ENST00000419220 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.42□□□□□ -0.9
LINC02539-202ENST00000419220 EVC2Q86UK5 1308 aa9.42□□□□□ -0.9
LINC02539-202ENST00000419220 HRO43593 1189 aa9.42□□□□□ -0.9
LINC02539-202ENST00000419220 PSME1Q06323 249 aa9.42□□□□□ -0.9
LINC02539-202ENST00000419220 SAFB2Q14151 953 aaKnown RBP eCLIP9.42□□□□□ -0.9
LINC02539-202ENST00000419220 XIRP1Q702N8 1843 aaKnown RBP9.41□□□□□ -0.9
LINC02539-202ENST00000419220 ZEB1P37275 1124 aaPredicted RBP9.41□□□□□ -0.9
LINC02539-202ENST00000419220 NBPF1Q3BBV0 1214 aa9.41□□□□□ -0.9
LINC02539-202ENST00000419220 ESCO1Q5FWF5 840 aa9.41□□□□□ -0.9
LINC02539-202ENST00000419220 TRPM1Q7Z4N2 1603 aa9.41□□□□□ -0.9
LINC02539-202ENST00000419220 MINK1Q8N4C8 1332 aaPredicted RBP9.4□□□□□ -0.9
LINC02539-202ENST00000419220 WASLO00401 505 aaPredicted RBP9.4□□□□□ -0.9
LINC02539-202ENST00000419220 SRPK2P78362 688 aaKnown RBP9.4□□□□□ -0.9
LINC02539-202ENST00000419220 ADGRB1O14514 1584 aa9.4□□□□□ -0.9
LINC02539-202ENST00000419220 NPHP3Q7Z494 1330 aa9.39□□□□□ -0.91
LINC02539-202ENST00000419220 KIF3CO14782 793 aa9.39□□□□□ -0.91
LINC02539-202ENST00000419220 KCNV2Q8TDN2 545 aa9.39□□□□□ -0.91
LINC02539-202ENST00000419220 LRRC59Q96AG4 307 aaKnown RBP9.39□□□□□ -0.91
LINC02539-202ENST00000419220 RALGAPBQ86X10 1494 aa9.39□□□□□ -0.91
LINC02539-202ENST00000419220 GPRASP1Q5JY77 1395 aa9.38□□□□□ -0.91
LINC02539-202ENST00000419220 CDC42BPGQ6DT37 1551 aa9.38□□□□□ -0.91
LINC02539-202ENST00000419220 NBPF8Q3BBV2 869 aa9.38□□□□□ -0.91
LINC02539-202ENST00000419220 C2orf72A6NCS6 295 aa9.37□□□□□ -0.91
LINC02539-202ENST00000419220 EIF4G2P78344 907 aaKnown RBP eCLIP9.37□□□□□ -0.91
LINC02539-202ENST00000419220 TMF1P82094 1093 aa9.37□□□□□ -0.91
LINC02539-202ENST00000419220 NGDNQ8NEJ9 315 aaKnown RBP9.37□□□□□ -0.91
LINC02539-202ENST00000419220 PUS7Q96PZ0 661 aaKnown RBP9.37□□□□□ -0.91
LINC02539-202ENST00000419220 HIRIP3Q9BW71 556 aaPredicted RBP9.37□□□□□ -0.91
LINC02539-202ENST00000419220 CDK19Q9BWU1 502 aa9.37□□□□□ -0.91
LINC02539-202ENST00000419220 ANKARQ7Z5J8 1434 aa9.37□□□□□ -0.91
LINC02539-202ENST00000419220 NALCNQ8IZF0 1738 aa9.36□□□□□ -0.91
LINC02539-202ENST00000419220 ARHGEF28Q8N1W1 1705 aaKnown RBP9.36□□□□□ -0.91
LINC02539-202ENST00000419220 ASXL1Q8IXJ9 1541 aa9.36□□□□□ -0.91
LINC02539-202ENST00000419220 ROBO1Q9Y6N7 1651 aa9.36□□□□□ -0.91
LINC02539-202ENST00000419220 C1orf167Q5SNV9 1468 aa9.36□□□□□ -0.91
LINC02539-202ENST00000419220 A0A0G2JS52 829 aa9.36□□□□□ -0.91
LINC02539-202ENST00000419220 BRINP3Q76B58 766 aa9.36□□□□□ -0.91
LINC02539-202ENST00000419220 MST1RQ04912 1400 aa9.36□□□□□ -0.91
LINC02539-202ENST00000419220 NUTM2FA1L443 756 aa9.35□□□□□ -0.91
LINC02539-202ENST00000419220 ITSN1Q15811 1721 aa9.35□□□□□ -0.91
LINC02539-202ENST00000419220 NUDT16Q96DE0 195 aaKnown RBP9.35□□□□□ -0.91
LINC02539-202ENST00000419220 KIF1AQ12756 1690 aa9.35□□□□□ -0.91
LINC02539-202ENST00000419220 ATAD2Q6PL18 1390 aa9.35□□□□□ -0.91
LINC02539-202ENST00000419220 PLEKHH1Q9ULM0 1364 aa9.35□□□□□ -0.91
LINC02539-202ENST00000419220 SBNO2Q9Y2G9 1366 aa9.35□□□□□ -0.91
LINC02539-202ENST00000419220 ADGRB2O60241 1585 aa9.34□□□□□ -0.91
LINC02539-202ENST00000419220 HSPA1LP34931 641 aa9.34□□□□□ -0.91
LINC02539-202ENST00000419220 PHLPP1O60346 1717 aa9.34□□□□□ -0.92
LINC02539-202ENST00000419220 FMN2Q9NZ56 1722 aa9.34□□□□□ -0.92
LINC02539-202ENST00000419220 QRICH2Q9H0J4 1663 aa9.33□□□□□ -0.92
LINC02539-202ENST00000419220 TULP4Q9NRJ4 1543 aa9.33□□□□□ -0.92
LINC02539-202ENST00000419220 ST20-MTHFSA0A0A6YYL1 179 aa9.33□□□□□ -0.92
LINC02539-202ENST00000419220 FOXO3O43524 673 aa9.33□□□□□ -0.92
LINC02539-202ENST00000419220 DMRTA1Q5VZB9 504 aa9.33□□□□□ -0.92
LINC02539-202ENST00000419220 HDGFL2Q7Z4V5 671 aaPredicted RBP9.33□□□□□ -0.92
LINC02539-202ENST00000419220 ORAI2Q96SN7 254 aa9.33□□□□□ -0.92
LINC02539-202ENST00000419220 TERF2IPQ9NYB0 399 aa9.33□□□□□ -0.92
LINC02539-202ENST00000419220 BRD4O60885 1362 aaPredicted RBP9.33□□□□□ -0.92
LINC02539-202ENST00000419220 USP47Q96K76 1375 aa9.33□□□□□ -0.92
LINC02539-202ENST00000419220 JCADQ9P266 1359 aa9.33□□□□□ -0.92
LINC02539-202ENST00000419220 SPATA31A6Q5VVP1 1343 aa9.32□□□□□ -0.92
LINC02539-202ENST00000419220 MEX3CQ5U5Q3 659 aaKnown RBP9.32□□□□□ -0.92
LINC02539-202ENST00000419220 KRT28Q7Z3Y7 464 aa9.32□□□□□ -0.92
LINC02539-202ENST00000419220 LARP6Q9BRS8 491 aaKnown RBP9.32□□□□□ -0.92
LINC02539-202ENST00000419220 NINLQ9Y2I6 1382 aa9.32□□□□□ -0.92
LINC02539-202ENST00000419220 PLEKHG3A1L390 1219 aa9.31□□□□□ -0.92
LINC02539-202ENST00000419220 PTPN5P54829 565 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms