RNA–Protein interactions for RNA: ENST00000417628.6

ECHDC1-206, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-206ENST00000417628 PTCD2Q8WV60 388 aaKnown RBP8.71□□□□□ -1.02
ECHDC1-206ENST00000417628 KDM4CQ9H3R0 1056 aa8.71□□□□□ -1.02
ECHDC1-206ENST00000417628 LAMC1P11047 1609 aa8.71□□□□□ -1.02
ECHDC1-206ENST00000417628 ARHGAP31Q2M1Z3 1444 aa8.71□□□□□ -1.02
ECHDC1-206ENST00000417628 RPRD2Q5VT52 1461 aaKnown RBP8.7□□□□□ -1.02
ECHDC1-206ENST00000417628 SLIT2O94813 1529 aa8.7□□□□□ -1.02
ECHDC1-206ENST00000417628 NRKQ7Z2Y5 1582 aa8.7□□□□□ -1.02
ECHDC1-206ENST00000417628 TBC1D12O60347 775 aa8.7□□□□□ -1.02
ECHDC1-206ENST00000417628 MINK1Q8N4C8 1332 aaPredicted RBP8.7□□□□□ -1.02
ECHDC1-206ENST00000417628 CCNB3Q8WWL7 1395 aa8.7□□□□□ -1.02
ECHDC1-206ENST00000417628 MAP2K5Q13163 448 aa8.69□□□□□ -1.02
ECHDC1-206ENST00000417628 SOS2Q07890 1332 aaPredicted RBP8.69□□□□□ -1.02
ECHDC1-206ENST00000417628 CCDC141Q6ZP82 1450 aa8.69□□□□□ -1.02
ECHDC1-206ENST00000417628 TRPM2O94759 1503 aa8.69□□□□□ -1.02
ECHDC1-206ENST00000417628 IRF6O14896 467 aa8.68□□□□□ -1.02
ECHDC1-206ENST00000417628 GNPATO15228 680 aa8.68□□□□□ -1.02
ECHDC1-206ENST00000417628 ONECUT3O60422 494 aaPredicted RBP8.68□□□□□ -1.02
ECHDC1-206ENST00000417628 FECHP22830 423 aa8.68□□□□□ -1.02
ECHDC1-206ENST00000417628 NBPF8Q3BBV2 869 aa8.68□□□□□ -1.02
ECHDC1-206ENST00000417628 NBPF14Q5TI25 921 aa8.68□□□□□ -1.02
ECHDC1-206ENST00000417628 CAMKK2Q96RR4 588 aa8.68□□□□□ -1.02
ECHDC1-206ENST00000417628 ANO8Q9HCE9 1232 aaPredicted RBP8.68□□□□□ -1.02
ECHDC1-206ENST00000417628 TBX22Q9Y458 520 aa8.68□□□□□ -1.02
ECHDC1-206ENST00000417628 PIK3R4Q99570 1358 aa8.68□□□□□ -1.02
ECHDC1-206ENST00000417628 EHBP1L1Q8N3D4 1523 aa8.68□□□□□ -1.02
ECHDC1-206ENST00000417628 EIF2AK4Q9P2K8 1649 aaKnown RBP8.68□□□□□ -1.02
ECHDC1-206ENST00000417628 SHANK3Q9BYB0 1731 aa8.68□□□□□ -1.02
ECHDC1-206ENST00000417628 A0A0G2JS52 829 aa8.67□□□□□ -1.02
ECHDC1-206ENST00000417628 FAM83GA6ND36 823 aa8.67□□□□□ -1.02
ECHDC1-206ENST00000417628 FCHSD2O94868 740 aa8.67□□□□□ -1.02
ECHDC1-206ENST00000417628 NUP188Q5SRE5 1749 aa8.67□□□□□ -1.02
ECHDC1-206ENST00000417628 C3orf67Q6ZVT6 689 aa8.67□□□□□ -1.02
ECHDC1-206ENST00000417628 IL27Q8NEV9 243 aa8.67□□□□□ -1.02
ECHDC1-206ENST00000417628 RREB1Q92766 1687 aa8.67□□□□□ -1.02
ECHDC1-206ENST00000417628 CCDC102AQ96A19 550 aa8.67□□□□□ -1.02
ECHDC1-206ENST00000417628 MYOM1P52179 1685 aa8.66□□□□□ -1.02
ECHDC1-206ENST00000417628 ZFYVE9O95405 1425 aa8.66□□□□□ -1.02
ECHDC1-206ENST00000417628 ZNF644Q9H582 1327 aaPredicted RBP8.66□□□□□ -1.02
ECHDC1-206ENST00000417628 HIC1Q14526 733 aa8.66□□□□□ -1.02
ECHDC1-206ENST00000417628 DLC1Q96QB1 1528 aa8.65□□□□□ -1.02
ECHDC1-206ENST00000417628 MTUS2Q5JR59 1369 aa8.65□□□□□ -1.02
ECHDC1-206ENST00000417628 IDI1Q13907 227 aa8.65□□□□□ -1.02
ECHDC1-206ENST00000417628 VPS72Q15906 364 aa8.65□□□□□ -1.02
ECHDC1-206ENST00000417628 C1orf167Q5SNV9 1468 aa8.64□□□□□ -1.03
ECHDC1-206ENST00000417628 CFAP65Q6ZU64 1925 aaKnown RBP8.64□□□□□ -1.03
ECHDC1-206ENST00000417628 PTGDRQ13258 359 aa8.64□□□□□ -1.03
ECHDC1-206ENST00000417628 CCDC9Q9Y3X0 531 aaKnown RBP8.64□□□□□ -1.03
ECHDC1-206ENST00000417628 TMEM131LA2VDJ0 1609 aa8.64□□□□□ -1.03
ECHDC1-206ENST00000417628 NOS1P29475 1434 aa8.63□□□□□ -1.03
ECHDC1-206ENST00000417628 ADAMTS13Q76LX8 1427 aa8.63□□□□□ -1.03
ECHDC1-206ENST00000417628 ADGRL3Q9HAR2 1447 aa8.63□□□□□ -1.03
ECHDC1-206ENST00000417628 AMHR2Q16671 573 aa8.63□□□□□ -1.03
ECHDC1-206ENST00000417628 RIMS2Q9UQ26 1411 aa8.63□□□□□ -1.03
ECHDC1-206ENST00000417628 PTPN23Q9H3S7 1636 aa8.62□□□□□ -1.03
ECHDC1-206ENST00000417628 SYT17Q9BSW7 474 aa8.62□□□□□ -1.03
ECHDC1-206ENST00000417628 FAM117AQ9C073 453 aa8.62□□□□□ -1.03
ECHDC1-206ENST00000417628 FHDC1Q9C0D6 1143 aaPredicted RBP8.62□□□□□ -1.03
ECHDC1-206ENST00000417628 AMOTL2Q9Y2J4 779 aa8.62□□□□□ -1.03
ECHDC1-206ENST00000417628 CASKIN1Q8WXD9 1431 aa8.62□□□□□ -1.03
ECHDC1-206ENST00000417628 APBA3O96018 575 aa8.61□□□□□ -1.03
ECHDC1-206ENST00000417628 HDGFP51858 240 aaKnown RBP8.61□□□□□ -1.03
ECHDC1-206ENST00000417628 FAM182BQ5T319 152 aa8.61□□□□□ -1.03
ECHDC1-206ENST00000417628 FYCO1Q9BQS8 1478 aa8.61□□□□□ -1.03
ECHDC1-206ENST00000417628 PTPRUQ92729 1446 aa8.61□□□□□ -1.03
ECHDC1-206ENST00000417628 USP32Q8NFA0 1604 aa8.61□□□□□ -1.03
ECHDC1-206ENST00000417628 XRN1Q8IZH2 1706 aaKnown RBP8.6□□□□□ -1.03
ECHDC1-206ENST00000417628 ZNF316A6NFI3 1004 aaPredicted RBP8.6□□□□□ -1.03
ECHDC1-206ENST00000417628 PHF14O94880 888 aa8.6□□□□□ -1.03
ECHDC1-206ENST00000417628 APLP1P51693 650 aa8.6□□□□□ -1.03
ECHDC1-206ENST00000417628 PARP9Q8IXQ6 854 aa8.6□□□□□ -1.03
ECHDC1-206ENST00000417628 CDHR5Q9HBB8 845 aa8.6□□□□□ -1.03
ECHDC1-206ENST00000417628 NPDC1Q9NQX5 325 aaPredicted RBP8.6□□□□□ -1.03
ECHDC1-206ENST00000417628 DAXXQ9UER7 740 aaPredicted RBP8.6□□□□□ -1.03
ECHDC1-206ENST00000417628 PCDHGA4Q9Y5G9 962 aa8.6□□□□□ -1.03
ECHDC1-206ENST00000417628 CASZ1Q86V15 1759 aa8.6□□□□□ -1.03
ECHDC1-206ENST00000417628 AATKQ6ZMQ8 1374 aa8.6□□□□□ -1.03
ECHDC1-206ENST00000417628 PLEKHG3A1L390 1219 aa8.59□□□□□ -1.03
ECHDC1-206ENST00000417628 GPR162Q16538 588 aa8.59□□□□□ -1.03
ECHDC1-206ENST00000417628 RSPH4AQ5TD94 716 aa8.59□□□□□ -1.03
ECHDC1-206ENST00000417628 EPAS1Q99814 870 aa8.59□□□□□ -1.03
ECHDC1-206ENST00000417628 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.59□□□□□ -1.03
ECHDC1-206ENST00000417628 WWC3Q9ULE0 1092 aa8.59□□□□□ -1.03
ECHDC1-206ENST00000417628 PCDHGA10Q9Y5H3 936 aa8.59□□□□□ -1.03
ECHDC1-206ENST00000417628 NALCNQ8IZF0 1738 aa8.59□□□□□ -1.03
ECHDC1-206ENST00000417628 NWD2Q9ULI1 1742 aa8.59□□□□□ -1.03
ECHDC1-206ENST00000417628 NEXMIFQ5QGS0 1516 aa8.59□□□□□ -1.03
ECHDC1-206ENST00000417628 PLCH1Q4KWH8 1693 aa8.59□□□□□ -1.03
ECHDC1-206ENST00000417628 ATP10DQ9P241 1426 aa8.58□□□□□ -1.04
ECHDC1-206ENST00000417628 TRIM37O94972 964 aa8.58□□□□□ -1.04
ECHDC1-206ENST00000417628 FAM98CQ17RN3 349 aaKnown RBP8.58□□□□□ -1.04
ECHDC1-206ENST00000417628 ADGRL2O95490 1459 aa8.57□□□□□ -1.04
ECHDC1-206ENST00000417628 PXDNQ92626 1479 aa8.57□□□□□ -1.04
ECHDC1-206ENST00000417628 DNAJC5GQ8N7S2 189 aa8.57□□□□□ -1.04
ECHDC1-206ENST00000417628 ORAI2Q96SN7 254 aa8.57□□□□□ -1.04
ECHDC1-206ENST00000417628 NPHP3Q7Z494 1330 aa8.56□□□□□ -1.04
ECHDC1-206ENST00000417628 ABCC5O15440 1437 aa8.56□□□□□ -1.04
ECHDC1-206ENST00000417628 ZBTB7AO95365 584 aa8.56□□□□□ -1.04
ECHDC1-206ENST00000417628 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.56□□□□□ -1.04
ECHDC1-206ENST00000417628 SLC52A1Q9NWF4 448 aa8.56□□□□□ -1.04
ECHDC1-206ENST00000417628 ARHGEF5Q12774 1597 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms