RNA–Protein interactions for RNA: ENST00000417101.1

ACTB-203, Transcript of actin beta, humanhuman

TSL 4

Gene ACTB, Length 472 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-203ENST00000417101 PARD3Q8TEW0 1356 aa30.89■■■□□ 2.54
ACTB-203ENST00000417101 LRP5O75197 1615 aa30.87■■■□□ 2.53
ACTB-203ENST00000417101 MON2Q7Z3U7 1717 aa30.87■■■□□ 2.53
ACTB-203ENST00000417101 DDB1Q16531 1140 aa30.87■■■□□ 2.53
ACTB-203ENST00000417101 NFAT5O94916 1531 aa30.87■■■□□ 2.53
ACTB-203ENST00000417101 CSB-PGBD3P0DP91 1061 aa30.86■■■□□ 2.53
ACTB-203ENST00000417101 SLC12A5Q9H2X9 1139 aa30.86■■■□□ 2.53
ACTB-203ENST00000417101 CD163L1Q9NR16 1453 aa30.86■■■□□ 2.53
ACTB-203ENST00000417101 OVOS2A0A0G2JMS6 1433 aa30.85■■■□□ 2.53
ACTB-203ENST00000417101 OVOS2A0A0J9YW53 1432 aa30.85■■■□□ 2.53
ACTB-203ENST00000417101 OVOS2Q6IE36 1432 aa30.85■■■□□ 2.53
ACTB-203ENST00000417101 C11orf95C9JLR9 678 aaPredicted RBP30.85■■■□□ 2.53
ACTB-203ENST00000417101 HDGFL2Q7Z4V5 671 aaPredicted RBP30.85■■■□□ 2.53
ACTB-203ENST00000417101 NME9Q86XW9 330 aa30.85■■■□□ 2.53
ACTB-203ENST00000417101 USP31Q70CQ4 1352 aa30.83■■■□□ 2.53
ACTB-203ENST00000417101 TRIM26Q12899 539 aaPredicted RBP30.83■■■□□ 2.53
ACTB-203ENST00000417101 CARD10Q9BWT7 1032 aa30.83■■■□□ 2.53
ACTB-203ENST00000417101 LRRC37A3O60309 1634 aa30.83■■■□□ 2.53
ACTB-203ENST00000417101 CDCA7Q9BWT1 371 aaPredicted RBP30.81■■■□□ 2.52
ACTB-203ENST00000417101 RGPD5Q99666 1765 aa30.81■■■□□ 2.52
ACTB-203ENST00000417101 TERF2IPQ9NYB0 399 aa30.8■■■□□ 2.52
ACTB-203ENST00000417101 PEAK1Q9H792 1746 aa30.79■■■□□ 2.52
ACTB-203ENST00000417101 PUS7Q96PZ0 661 aaKnown RBP30.78■■■□□ 2.52
ACTB-203ENST00000417101 EDC4Q6P2E9 1401 aaKnown RBP30.78■■■□□ 2.52
ACTB-203ENST00000417101 ST20-MTHFSA0A0A6YYL1 179 aa30.77■■■□□ 2.52
ACTB-203ENST00000417101 MARCH10Q8NA82 808 aaPredicted RBP30.77■■■□□ 2.52
ACTB-203ENST00000417101 RREB1Q92766 1687 aa30.77■■■□□ 2.52
ACTB-203ENST00000417101 A0A1W2PP64 1363 aa30.77■■■□□ 2.52
ACTB-203ENST00000417101 TESK2Q96S53 571 aa30.76■■■□□ 2.51
ACTB-203ENST00000417101 ABCC6O95255 1503 aa30.76■■■□□ 2.51
ACTB-203ENST00000417101 NBPF14Q5TI25 921 aa30.75■■■□□ 2.51
ACTB-203ENST00000417101 WNK3Q9BYP7 1800 aa30.75■■■□□ 2.51
ACTB-203ENST00000417101 CCDC7Q96M83 1385 aa30.74■■■□□ 2.51
ACTB-203ENST00000417101 USP54Q70EL1 1684 aa30.74■■■□□ 2.51
ACTB-203ENST00000417101 NUP188Q5SRE5 1749 aa30.73■■■□□ 2.51
ACTB-203ENST00000417101 PTF1AQ7RTS3 328 aa30.72■■■□□ 2.51
ACTB-203ENST00000417101 BCL11BQ9C0K0 894 aaPredicted RBP30.72■■■□□ 2.51
ACTB-203ENST00000417101 EXOC5O00471 708 aa30.71■■■□□ 2.51
ACTB-203ENST00000417101 ERBB3P21860 1342 aa30.71■■■□□ 2.51
ACTB-203ENST00000417101 NLRP2Q9NX02 1062 aa30.7■■■□□ 2.51
ACTB-203ENST00000417101 SBF2Q86WG5 1849 aa30.69■■■□□ 2.5
ACTB-203ENST00000417101 PLSCR1O15162 318 aa30.69■■■□□ 2.5
ACTB-203ENST00000417101 BCL9O00512 1426 aa30.68■■■□□ 2.5
ACTB-203ENST00000417101 NINLQ9Y2I6 1382 aa30.67■■■□□ 2.5
ACTB-203ENST00000417101 SLC24A1O60721 1099 aa30.67■■■□□ 2.5
ACTB-203ENST00000417101 ANKRD24Q8TF21 1146 aa30.66■■■□□ 2.5
ACTB-203ENST00000417101 LTN1O94822 1766 aa30.65■■■□□ 2.5
ACTB-203ENST00000417101 TNS2Q63HR2 1409 aa30.64■■■□□ 2.5
ACTB-203ENST00000417101 RGPD3A6NKT7 1758 aaPredicted RBP30.61■■■□□ 2.49
ACTB-203ENST00000417101 RGPD4Q7Z3J3 1758 aa30.61■■■□□ 2.49
ACTB-203ENST00000417101 IL2RBP14784 551 aa30.6■■■□□ 2.49
ACTB-203ENST00000417101 COG3Q96JB2 828 aa30.6■■■□□ 2.49
ACTB-203ENST00000417101 USP47Q96K76 1375 aa30.59■■■□□ 2.49
ACTB-203ENST00000417101 PROM2Q8N271 834 aa30.59■■■□□ 2.49
ACTB-203ENST00000417101 IP6K1Q92551 441 aa30.59■■■□□ 2.49
ACTB-203ENST00000417101 ANO8Q9HCE9 1232 aaPredicted RBP30.58■■■□□ 2.49
ACTB-203ENST00000417101 TMF1P82094 1093 aa30.57■■■□□ 2.48
ACTB-203ENST00000417101 KCNQ2O43526 872 aa30.56■■■□□ 2.48
ACTB-203ENST00000417101 LTV1Q96GA3 475 aaPredicted RBP30.56■■■□□ 2.48
ACTB-203ENST00000417101 ANKRD36BQ8N2N9 1353 aa30.55■■■□□ 2.48
ACTB-203ENST00000417101 ACSBG1Q96GR2 724 aa30.54■■■□□ 2.48
ACTB-203ENST00000417101 MAP3K19Q56UN5 1328 aa30.53■■■□□ 2.48
ACTB-203ENST00000417101 FBLN1P23142 703 aa30.53■■■□□ 2.48
ACTB-203ENST00000417101 TXNRD1Q16881 649 aa30.53■■■□□ 2.48
ACTB-203ENST00000417101 SPON1Q9HCB6 807 aa30.53■■■□□ 2.48
ACTB-203ENST00000417101 AMPHP49418 695 aa30.5■■■□□ 2.47
ACTB-203ENST00000417101 HOXC9P31274 260 aa30.49■■■□□ 2.47
ACTB-203ENST00000417101 PPP1R1BQ9UD71 204 aaPredicted RBP30.48■■■□□ 2.47
ACTB-203ENST00000417101 NHSQ6T4R5 1651 aa30.47■■■□□ 2.47
ACTB-203ENST00000417101 FYB1O15117 783 aa30.47■■■□□ 2.47
ACTB-203ENST00000417101 GGNBP2Q9H3C7 697 aa30.47■■■□□ 2.47
ACTB-203ENST00000417101 CDCA8Q53HL2 280 aa30.45■■■□□ 2.47
ACTB-203ENST00000417101 PDGFDQ9GZP0 370 aaPredicted RBP30.45■■■□□ 2.47
ACTB-203ENST00000417101 STK32BQ9NY57 414 aa30.45■■■□□ 2.47
ACTB-203ENST00000417101 DDX54Q8TDD1 881 aaKnown RBP30.44■■■□□ 2.46
ACTB-203ENST00000417101 RRS1Q15050 365 aaKnown RBP30.43■■■□□ 2.46
ACTB-203ENST00000417101 FAM208AQ9UK61 1670 aaKnown RBP30.42■■■□□ 2.46
ACTB-203ENST00000417101 PCGF6Q9BYE7 350 aa30.42■■■□□ 2.46
ACTB-203ENST00000417101 SLC15A2Q16348 729 aa30.41■■■□□ 2.46
ACTB-203ENST00000417101 TIMELESSQ9UNS1 1208 aa30.41■■■□□ 2.46
ACTB-203ENST00000417101 CASZ1Q86V15 1759 aa30.4■■■□□ 2.46
ACTB-203ENST00000417101 RTL1A6NKG5 1358 aa30.4■■■□□ 2.46
ACTB-203ENST00000417101 ZBTB7AO95365 584 aa30.39■■■□□ 2.46
ACTB-203ENST00000417101 KAT6BQ8WYB5 2073 aa30.38■■■□□ 2.45
ACTB-203ENST00000417101 BTAF1O14981 1849 aa30.36■■■□□ 2.45
ACTB-203ENST00000417101 CLSPNQ9HAW4 1339 aa30.35■■■□□ 2.45
ACTB-203ENST00000417101 NBPF6Q5VWK0 638 aa30.34■■■□□ 2.45
ACTB-203ENST00000417101 NBPF4Q96M43 638 aa30.34■■■□□ 2.45
ACTB-203ENST00000417101 CARD14Q9BXL6 1004 aa30.34■■■□□ 2.45
ACTB-203ENST00000417101 ATF5Q9Y2D1 282 aaPredicted RBP30.34■■■□□ 2.45
ACTB-203ENST00000417101 ZCRB1Q8TBF4 217 aaKnown RBP30.33■■■□□ 2.45
ACTB-203ENST00000417101 RGPD2P0DJD1 1756 aa30.33■■■□□ 2.45
ACTB-203ENST00000417101 MEGF6O75095 1541 aa30.32■■■□□ 2.44
ACTB-203ENST00000417101 USHBP1Q8N6Y0 703 aa30.32■■■□□ 2.44
ACTB-203ENST00000417101 SYTL4Q96C24 671 aaPredicted RBP30.31■■■□□ 2.44
ACTB-203ENST00000417101 LRRC4BQ9NT99 713 aa30.31■■■□□ 2.44
ACTB-203ENST00000417101 SMG6Q86US8 1419 aaKnown RBP30.3■■■□□ 2.44
ACTB-203ENST00000417101 PTGER2P43116 358 aa30.3■■■□□ 2.44
ACTB-203ENST00000417101 HSP90AB2PQ58FF8 381 aa30.3■■■□□ 2.44
ACTB-203ENST00000417101 NSD3Q9BZ95 1437 aa30.3■■■□□ 2.44
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms