RNA–Protein interactions for RNA: ENST00000417088.2

RPS28-201, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 334 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-201ENST00000417088 OVOS2A0A0J9YW53 1432 aa21.12■□□□□ 0.97
RPS28-201ENST00000417088 OVOS2Q6IE36 1432 aa21.12■□□□□ 0.97
RPS28-201ENST00000417088 SBNO2Q9Y2G9 1366 aa21.12■□□□□ 0.97
RPS28-201ENST00000417088 RREB1Q92766 1687 aa21.12■□□□□ 0.97
RPS28-201ENST00000417088 CARD11Q9BXL7 1154 aa21.12■□□□□ 0.97
RPS28-201ENST00000417088 PEAK1Q9H792 1746 aa21.11■□□□□ 0.97
RPS28-201ENST00000417088 LRRC37A3O60309 1634 aa21.11■□□□□ 0.97
RPS28-201ENST00000417088 NBPF14Q5TI25 921 aa21.1■□□□□ 0.97
RPS28-201ENST00000417088 NUP188Q5SRE5 1749 aa21.09■□□□□ 0.97
RPS28-201ENST00000417088 CDCA7Q9BWT1 371 aaPredicted RBP21.09■□□□□ 0.97
RPS28-201ENST00000417088 CARD10Q9BWT7 1032 aa21.09■□□□□ 0.97
RPS28-201ENST00000417088 NFAT5O94916 1531 aa21.09■□□□□ 0.97
RPS28-201ENST00000417088 CSB-PGBD3P0DP91 1061 aa21.08■□□□□ 0.97
RPS28-201ENST00000417088 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.08■□□□□ 0.97
RPS28-201ENST00000417088 MARCH10Q8NA82 808 aaPredicted RBP21.08■□□□□ 0.97
RPS28-201ENST00000417088 CD163L1Q9NR16 1453 aa21.07■□□□□ 0.96
RPS28-201ENST00000417088 RGPD5Q99666 1765 aa21.06■□□□□ 0.96
RPS28-201ENST00000417088 PLSCR1O15162 318 aa21.06■□□□□ 0.96
RPS28-201ENST00000417088 PTF1AQ7RTS3 328 aa21.06■□□□□ 0.96
RPS28-201ENST00000417088 USP31Q70CQ4 1352 aa21.06■□□□□ 0.96
RPS28-201ENST00000417088 MON2Q7Z3U7 1717 aa21.06■□□□□ 0.96
RPS28-201ENST00000417088 NME9Q86XW9 330 aa21.05■□□□□ 0.96
RPS28-201ENST00000417088 BCL11BQ9C0K0 894 aaPredicted RBP21.05■□□□□ 0.96
RPS28-201ENST00000417088 SBF2Q86WG5 1849 aa21.04■□□□□ 0.96
RPS28-201ENST00000417088 WNK3Q9BYP7 1800 aa21.04■□□□□ 0.96
RPS28-201ENST00000417088 TMC1Q8TDI8 760 aa21.04■□□□□ 0.96
RPS28-201ENST00000417088 SLC12A5Q9H2X9 1139 aa21.04■□□□□ 0.96
RPS28-201ENST00000417088 BCL9O00512 1426 aa21.04■□□□□ 0.96
RPS28-201ENST00000417088 TONSLQ96HA7 1378 aa21.03■□□□□ 0.96
RPS28-201ENST00000417088 CCDC7Q96M83 1385 aa21.02■□□□□ 0.96
RPS28-201ENST00000417088 EXOC5O00471 708 aa21.02■□□□□ 0.96
RPS28-201ENST00000417088 HDGFL2Q7Z4V5 671 aaPredicted RBP21.02■□□□□ 0.96
RPS28-201ENST00000417088 ABCC6O95255 1503 aa21.02■□□□□ 0.96
RPS28-201ENST00000417088 RGPD3A6NKT7 1758 aaPredicted RBP21■□□□□ 0.95
RPS28-201ENST00000417088 RGPD4Q7Z3J3 1758 aa21■□□□□ 0.95
RPS28-201ENST00000417088 USP54Q70EL1 1684 aa20.99■□□□□ 0.95
RPS28-201ENST00000417088 PROM2Q8N271 834 aa20.99■□□□□ 0.95
RPS28-201ENST00000417088 PUS7Q96PZ0 661 aaKnown RBP20.99■□□□□ 0.95
RPS28-201ENST00000417088 ERBB3P21860 1342 aa20.99■□□□□ 0.95
RPS28-201ENST00000417088 EDC4Q6P2E9 1401 aaKnown RBP20.98■□□□□ 0.95
RPS28-201ENST00000417088 ANO8Q9HCE9 1232 aaPredicted RBP20.98■□□□□ 0.95
RPS28-201ENST00000417088 TERF2IPQ9NYB0 399 aa20.98■□□□□ 0.95
RPS28-201ENST00000417088 KCNQ2O43526 872 aa20.97■□□□□ 0.95
RPS28-201ENST00000417088 SPON1Q9HCB6 807 aa20.97■□□□□ 0.95
RPS28-201ENST00000417088 NLRP2Q9NX02 1062 aa20.97■□□□□ 0.95
RPS28-201ENST00000417088 A0A1W2PP64 1363 aa20.97■□□□□ 0.95
RPS28-201ENST00000417088 TNS2Q63HR2 1409 aa20.96■□□□□ 0.95
RPS28-201ENST00000417088 TESK2Q96S53 571 aa20.95■□□□□ 0.94
RPS28-201ENST00000417088 ANKRD24Q8TF21 1146 aa20.94■□□□□ 0.94
RPS28-201ENST00000417088 ST20-MTHFSA0A0A6YYL1 179 aa20.93■□□□□ 0.94
RPS28-201ENST00000417088 TXNRD1Q16881 649 aa20.93■□□□□ 0.94
RPS28-201ENST00000417088 IL2RBP14784 551 aa20.92■□□□□ 0.94
RPS28-201ENST00000417088 PPP1R1BQ9UD71 204 aaPredicted RBP20.92■□□□□ 0.94
RPS28-201ENST00000417088 LTN1O94822 1766 aa20.92■□□□□ 0.94
RPS28-201ENST00000417088 PDGFDQ9GZP0 370 aaPredicted RBP20.91■□□□□ 0.94
RPS28-201ENST00000417088 NINLQ9Y2I6 1382 aa20.89■□□□□ 0.93
RPS28-201ENST00000417088 IP6K1Q92551 441 aa20.89■□□□□ 0.93
RPS28-201ENST00000417088 ACSBG1Q96GR2 724 aa20.89■□□□□ 0.93
RPS28-201ENST00000417088 CASZ1Q86V15 1759 aa20.87■□□□□ 0.93
RPS28-201ENST00000417088 SLC24A1O60721 1099 aa20.87■□□□□ 0.93
RPS28-201ENST00000417088 STK32BQ9NY57 414 aa20.87■□□□□ 0.93
RPS28-201ENST00000417088 SLC15A2Q16348 729 aa20.86■□□□□ 0.93
RPS28-201ENST00000417088 NHSQ6T4R5 1651 aa20.86■□□□□ 0.93
RPS28-201ENST00000417088 ZBTB7AO95365 584 aa20.85■□□□□ 0.93
RPS28-201ENST00000417088 LTV1Q96GA3 475 aaPredicted RBP20.85■□□□□ 0.93
RPS28-201ENST00000417088 COG3Q96JB2 828 aa20.85■□□□□ 0.93
RPS28-201ENST00000417088 MAP3K19Q56UN5 1328 aa20.84■□□□□ 0.93
RPS28-201ENST00000417088 FBLN1P23142 703 aa20.84■□□□□ 0.93
RPS28-201ENST00000417088 HOXC9P31274 260 aa20.82■□□□□ 0.92
RPS28-201ENST00000417088 ATF5Q9Y2D1 282 aaPredicted RBP20.82■□□□□ 0.92
RPS28-201ENST00000417088 ANKRD36BQ8N2N9 1353 aa20.82■□□□□ 0.92
RPS28-201ENST00000417088 PTGER2P43116 358 aa20.81■□□□□ 0.92
RPS28-201ENST00000417088 TRIM26Q12899 539 aaPredicted RBP20.81■□□□□ 0.92
RPS28-201ENST00000417088 AMPHP49418 695 aa20.8■□□□□ 0.92
RPS28-201ENST00000417088 DDX54Q8TDD1 881 aaKnown RBP20.8■□□□□ 0.92
RPS28-201ENST00000417088 TMF1P82094 1093 aa20.79■□□□□ 0.92
RPS28-201ENST00000417088 KAT6BQ8WYB5 2073 aa20.79■□□□□ 0.92
RPS28-201ENST00000417088 BTAF1O14981 1849 aa20.78■□□□□ 0.92
RPS28-201ENST00000417088 FAM208AQ9UK61 1670 aaKnown RBP20.78■□□□□ 0.92
RPS28-201ENST00000417088 USP47Q96K76 1375 aa20.78■□□□□ 0.92
RPS28-201ENST00000417088 FYB1O15117 783 aa20.78■□□□□ 0.92
RPS28-201ENST00000417088 YY1P25490 414 aa20.78■□□□□ 0.92
RPS28-201ENST00000417088 DCAF8L1A6NGE4 600 aa20.77■□□□□ 0.92
RPS28-201ENST00000417088 MTFR1LQ9H019 292 aa20.77■□□□□ 0.92
RPS28-201ENST00000417088 LRRC4BQ9NT99 713 aa20.77■□□□□ 0.92
RPS28-201ENST00000417088 PAPPAQ13219 1627 aa20.76■□□□□ 0.91
RPS28-201ENST00000417088 GGNBP2Q9H3C7 697 aa20.76■□□□□ 0.91
RPS28-201ENST00000417088 MYOM1P52179 1685 aa20.75■□□□□ 0.91
RPS28-201ENST00000417088 RRS1Q15050 365 aaKnown RBP20.75■□□□□ 0.91
RPS28-201ENST00000417088 ZNF827Q17R98 1081 aa20.75■□□□□ 0.91
RPS28-201ENST00000417088 SGIP1Q9BQI5 828 aa20.75■□□□□ 0.91
RPS28-201ENST00000417088 ZCRB1Q8TBF4 217 aaKnown RBP20.74■□□□□ 0.91
RPS28-201ENST00000417088 RTL1A6NKG5 1358 aa20.73■□□□□ 0.91
RPS28-201ENST00000417088 PRIM1P49642 420 aaKnown RBP20.73■□□□□ 0.91
RPS28-201ENST00000417088 SLC27A3Q5K4L6 730 aa20.72■□□□□ 0.91
RPS28-201ENST00000417088 NBPF6Q5VWK0 638 aa20.72■□□□□ 0.91
RPS28-201ENST00000417088 NBPF4Q96M43 638 aa20.72■□□□□ 0.91
RPS28-201ENST00000417088 MEGF6O75095 1541 aa20.72■□□□□ 0.91
RPS28-201ENST00000417088 RGPD2P0DJD1 1756 aa20.72■□□□□ 0.91
RPS28-201ENST00000417088 CDCA8Q53HL2 280 aa20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms