RNA–Protein interactions for RNA: ENST00000416688.5

CTDSPL-203, Transcript of CTD small phosphatase like, humanhuman

TSL 3

Gene CTDSPL, Length 368 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-203ENST00000416688 POTEGQ6S5H5 508 aa4.08□□□□□ -1.76
CTDSPL-203ENST00000416688 AMOTL1Q8IY63 956 aa4.08□□□□□ -1.76
CTDSPL-203ENST00000416688 PRPF38AQ8NAV1 312 aaKnown RBP4.08□□□□□ -1.76
CTDSPL-203ENST00000416688 TMEM87AQ8NBN3 555 aa4.08□□□□□ -1.76
CTDSPL-203ENST00000416688 PNMA1Q8ND90 353 aa4.08□□□□□ -1.76
CTDSPL-203ENST00000416688 GMLQ99445 158 aa4.08□□□□□ -1.76
CTDSPL-203ENST00000416688 SPC25Q9HBM1 224 aa4.08□□□□□ -1.76
CTDSPL-203ENST00000416688 METTL5Q9NRN9 209 aaKnown RBP4.08□□□□□ -1.76
CTDSPL-203ENST00000416688 GNL3LQ9NVN8 582 aaKnown RBP4.08□□□□□ -1.76
CTDSPL-203ENST00000416688 IFT57Q9NWB7 429 aa4.08□□□□□ -1.76
CTDSPL-203ENST00000416688 LIMD1Q9UGP4 676 aa4.08□□□□□ -1.76
CTDSPL-203ENST00000416688 EGFL7Q9UHF1 273 aa4.08□□□□□ -1.76
CTDSPL-203ENST00000416688 PRKAB1Q9Y478 270 aa4.08□□□□□ -1.76
CTDSPL-203ENST00000416688 OATP04181 439 aa4.07□□□□□ -1.76
CTDSPL-203ENST00000416688 DNAJA1P31689 397 aaKnown RBP4.07□□□□□ -1.76
CTDSPL-203ENST00000416688 PTGER2P43116 358 aa4.07□□□□□ -1.76
CTDSPL-203ENST00000416688 ARID5AQ03989 594 aa4.07□□□□□ -1.76
CTDSPL-203ENST00000416688 RAD51AP2Q09MP3 1159 aa4.07□□□□□ -1.76
CTDSPL-203ENST00000416688 SAFB2Q14151 953 aaKnown RBP eCLIP4.07□□□□□ -1.76
CTDSPL-203ENST00000416688 MRPL58Q14197 206 aaKnown RBP4.07□□□□□ -1.76
CTDSPL-203ENST00000416688 FAM43BQ6ZT52 329 aaPredicted RBP4.07□□□□□ -1.76
CTDSPL-203ENST00000416688 STK32AQ8WU08 396 aa4.07□□□□□ -1.76
CTDSPL-203ENST00000416688 CLP1Q92989 425 aaKnown RBP4.07□□□□□ -1.76
CTDSPL-203ENST00000416688 RNF34Q969K3 372 aa4.07□□□□□ -1.76
CTDSPL-203ENST00000416688 EVI5LQ96CN4 794 aa4.07□□□□□ -1.76
CTDSPL-203ENST00000416688 MRFAP1L1Q96HT8 127 aa4.07□□□□□ -1.76
CTDSPL-203ENST00000416688 FRMD6Q96NE9 622 aa4.07□□□□□ -1.76
CTDSPL-203ENST00000416688 SLKQ9H2G2 1235 aaPredicted RBP4.07□□□□□ -1.76
CTDSPL-203ENST00000416688 PIF1Q9H611 641 aa4.07□□□□□ -1.76
CTDSPL-203ENST00000416688 MRS2Q9HD23 443 aa4.07□□□□□ -1.76
CTDSPL-203ENST00000416688 DDX56Q9NY93 547 aaKnown RBP4.07□□□□□ -1.76
CTDSPL-203ENST00000416688 TCEAL9Q9UHQ7 104 aa4.07□□□□□ -1.76
CTDSPL-203ENST00000416688 DCTN4Q9UJW0 460 aa4.07□□□□□ -1.76
CTDSPL-203ENST00000416688 ZMIZ1Q9ULJ6 1067 aa4.07□□□□□ -1.76
CTDSPL-203ENST00000416688 G3BP2Q9UN86 482 aaKnown RBP4.07□□□□□ -1.76
CTDSPL-203ENST00000416688 NUTM2BA6NNL0 878 aaPredicted RBP4.06□□□□□ -1.76
CTDSPL-203ENST00000416688 NUTM2EB1AL46 878 aaPredicted RBP4.06□□□□□ -1.76
CTDSPL-203ENST00000416688 SPTLC1O15269 473 aa4.06□□□□□ -1.76
CTDSPL-203ENST00000416688 PLIN1O60240 522 aa4.06□□□□□ -1.76
CTDSPL-203ENST00000416688 ZRANB2O95218 330 aaKnown RBP eCLIP4.06□□□□□ -1.76
CTDSPL-203ENST00000416688 KIF4AO95239 1232 aa4.06□□□□□ -1.76
CTDSPL-203ENST00000416688 ATP2B4P23634 1241 aa4.06□□□□□ -1.76
CTDSPL-203ENST00000416688 GJA5P36382 358 aa4.06□□□□□ -1.76
CTDSPL-203ENST00000416688 TAGLNQ01995 201 aaKnown RBP4.06□□□□□ -1.76
CTDSPL-203ENST00000416688 HDAC1Q13547 482 aaPredicted RBP4.06□□□□□ -1.76
CTDSPL-203ENST00000416688 KANK4Q5T7N3 995 aaPredicted RBP4.06□□□□□ -1.76
CTDSPL-203ENST00000416688 NUTM2DQ5VT03 806 aaPredicted RBP4.06□□□□□ -1.76
CTDSPL-203ENST00000416688 CCSAPQ6IQ19 270 aaPredicted RBP4.06□□□□□ -1.76
CTDSPL-203ENST00000416688 ZNF280DQ6N043 979 aa4.06□□□□□ -1.76
CTDSPL-203ENST00000416688 TBC1D9Q6ZT07 1266 aa4.06□□□□□ -1.76
CTDSPL-203ENST00000416688 C11orf96Q7Z7L8 435 aa4.06□□□□□ -1.76
CTDSPL-203ENST00000416688 VPS37DQ86XT2 251 aa4.06□□□□□ -1.76
CTDSPL-203ENST00000416688 NUTM2AQ8IVF1 878 aaPredicted RBP4.06□□□□□ -1.76
CTDSPL-203ENST00000416688 FMNL3Q8IVF7 1028 aa4.06□□□□□ -1.76
CTDSPL-203ENST00000416688 CACTIN-AS1Q8N1I8 211 aa4.06□□□□□ -1.76
CTDSPL-203ENST00000416688 SLAIN1Q8ND83 568 aa4.06□□□□□ -1.76
CTDSPL-203ENST00000416688 FAM200AQ8TCP9 573 aa4.06□□□□□ -1.76
CTDSPL-203ENST00000416688 RELTQ969Z4 430 aa4.06□□□□□ -1.76
CTDSPL-203ENST00000416688 FAM163AQ96GL9 167 aaPredicted RBP4.06□□□□□ -1.76
CTDSPL-203ENST00000416688 GJD4Q96KN9 370 aaPredicted RBP4.06□□□□□ -1.76
CTDSPL-203ENST00000416688 TYW1Q9NV66 732 aaKnown RBP4.06□□□□□ -1.76
CTDSPL-203ENST00000416688 FAM196BA6NMK8 535 aa4.05□□□□□ -1.76
CTDSPL-203ENST00000416688 STK10O94804 968 aaKnown RBP4.05□□□□□ -1.76
CTDSPL-203ENST00000416688 XRCC5P13010 732 aaKnown RBP4.05□□□□□ -1.76
CTDSPL-203ENST00000416688 COPB2P35606 906 aa4.05□□□□□ -1.76
CTDSPL-203ENST00000416688 EIF4G2P78344 907 aaKnown RBP eCLIP4.05□□□□□ -1.76
CTDSPL-203ENST00000416688 BMS1Q14692 1282 aaKnown RBP4.05□□□□□ -1.76
CTDSPL-203ENST00000416688 ZRSR2Q15696 482 aaKnown RBP4.05□□□□□ -1.76
CTDSPL-203ENST00000416688 FBXO31Q5XUX0 539 aaPredicted RBP4.05□□□□□ -1.76
CTDSPL-203ENST00000416688 DPY19L2Q6NUT2 758 aa4.05□□□□□ -1.76
CTDSPL-203ENST00000416688 RINLQ6ZS11 566 aa4.05□□□□□ -1.76
CTDSPL-203ENST00000416688 GLYCTKQ8IVS8 523 aa4.05□□□□□ -1.76
CTDSPL-203ENST00000416688 C1orf216Q8TAB5 229 aa4.05□□□□□ -1.76
CTDSPL-203ENST00000416688 CXorf38Q8TB03 319 aa4.05□□□□□ -1.76
CTDSPL-203ENST00000416688 PRR7Q8TB68 274 aa4.05□□□□□ -1.76
CTDSPL-203ENST00000416688 JDP2Q8WYK2 163 aa4.05□□□□□ -1.76
CTDSPL-203ENST00000416688 MS4A4AQ96JQ5 239 aa4.05□□□□□ -1.76
CTDSPL-203ENST00000416688 C8orf48Q96LL4 319 aa4.05□□□□□ -1.76
CTDSPL-203ENST00000416688 CEP89Q96ST8 783 aa4.05□□□□□ -1.76
CTDSPL-203ENST00000416688 FBXO9Q9UK97 447 aaPredicted RBP4.05□□□□□ -1.76
CTDSPL-203ENST00000416688 CCDC189A1A4V9 331 aa4.04□□□□□ -1.76
CTDSPL-203ENST00000416688 ENPP3O14638 875 aa4.04□□□□□ -1.76
CTDSPL-203ENST00000416688 LILRB3O75022 631 aa4.04□□□□□ -1.76
CTDSPL-203ENST00000416688 ABL1P00519 1130 aa4.04□□□□□ -1.76
CTDSPL-203ENST00000416688 MAN1A1P33908 653 aa4.04□□□□□ -1.76
CTDSPL-203ENST00000416688 GOLGA2Q08379 1002 aa4.04□□□□□ -1.76
CTDSPL-203ENST00000416688 DSG2Q14126 1118 aa4.04□□□□□ -1.76
CTDSPL-203ENST00000416688 CSPP1Q1MSJ5 1256 aa4.04□□□□□ -1.76
CTDSPL-203ENST00000416688 PPP1R18Q6NYC8 613 aa4.04□□□□□ -1.76
CTDSPL-203ENST00000416688 LARP1Q6PKG0 1096 aaKnown RBP4.04□□□□□ -1.76
CTDSPL-203ENST00000416688 PCGF5Q86SE9 256 aa4.04□□□□□ -1.76
CTDSPL-203ENST00000416688 JAZF1Q86VZ6 243 aa4.04□□□□□ -1.76
CTDSPL-203ENST00000416688 METTL16Q86W50 562 aaKnown RBP4.04□□□□□ -1.76
CTDSPL-203ENST00000416688 RNF135Q8IUD6 432 aa4.04□□□□□ -1.76
CTDSPL-203ENST00000416688 NFATC2IPQ8NCF5 419 aa4.04□□□□□ -1.76
CTDSPL-203ENST00000416688 TSC1Q92574 1164 aa4.04□□□□□ -1.76
CTDSPL-203ENST00000416688 DDX12PQ92771 950 aa4.04□□□□□ -1.76
CTDSPL-203ENST00000416688 PHOX2BQ99453 314 aa4.04□□□□□ -1.76
CTDSPL-203ENST00000416688 TMX4Q9H1E5 349 aaPredicted RBP4.04□□□□□ -1.76
CTDSPL-203ENST00000416688 DMGDHQ9UI17 866 aaKnown RBP4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms