RNA–Protein interactions for RNA: ENST00000416438.6

LINC00475-202, long intergenic non-protein coding RNA 475, humanhuman

TSL 2 BASIC

Gene LINC00475, Length 2,506 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00475-202ENST00000416438 WASLO00401 505 aaPredicted RBP18.49■□□□□ 0.55
LINC00475-202ENST00000416438 SPATA31D1Q6ZQQ2 1576 aa18.49■□□□□ 0.55
LINC00475-202ENST00000416438 REREQ9P2R6 1566 aa18.49■□□□□ 0.55
LINC00475-202ENST00000416438 GNAI1P63096 354 aa18.49■□□□□ 0.55
LINC00475-202ENST00000416438 SIRT2Q8IXJ6 389 aa18.49■□□□□ 0.55
LINC00475-202ENST00000416438 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.49■□□□□ 0.55
LINC00475-202ENST00000416438 BRPF1P55201 1214 aaPredicted RBP18.48■□□□□ 0.55
LINC00475-202ENST00000416438 TWISTNBQ3B726 338 aaPredicted RBP18.48■□□□□ 0.55
LINC00475-202ENST00000416438 HSCBQ8IWL3 235 aa18.48■□□□□ 0.55
LINC00475-202ENST00000416438 CHMP5Q9NZZ3 219 aa18.48■□□□□ 0.55
LINC00475-202ENST00000416438 IFT57Q9NWB7 429 aa18.48■□□□□ 0.55
LINC00475-202ENST00000416438 KIF20BQ96Q89 1820 aa18.47■□□□□ 0.55
LINC00475-202ENST00000416438 ZNF853P0CG23 659 aa18.47■□□□□ 0.55
LINC00475-202ENST00000416438 ZNF428Q96B54 188 aa18.47■□□□□ 0.55
LINC00475-202ENST00000416438 NUDT16Q96DE0 195 aaKnown RBP18.47■□□□□ 0.55
LINC00475-202ENST00000416438 METP08581 1390 aa18.46■□□□□ 0.55
LINC00475-202ENST00000416438 ATP7BP35670 1465 aa18.46■□□□□ 0.55
LINC00475-202ENST00000416438 SETD1AO15047 1707 aaKnown RBP18.46■□□□□ 0.55
LINC00475-202ENST00000416438 CDC42BPGQ6DT37 1551 aa18.46■□□□□ 0.55
LINC00475-202ENST00000416438 DLC1Q96QB1 1528 aa18.45■□□□□ 0.54
LINC00475-202ENST00000416438 RBM25P49756 843 aaKnown RBP18.45■□□□□ 0.54
LINC00475-202ENST00000416438 CALD1Q05682 793 aaKnown RBP18.45■□□□□ 0.54
LINC00475-202ENST00000416438 ARHGAP45Q92619 1136 aa18.45■□□□□ 0.54
LINC00475-202ENST00000416438 COG3Q96JB2 828 aa18.45■□□□□ 0.54
LINC00475-202ENST00000416438 MAP2P11137 1827 aaKnown RBP18.45■□□□□ 0.54
LINC00475-202ENST00000416438 ZNF692Q9BU19 519 aaPredicted RBP18.45■□□□□ 0.54
LINC00475-202ENST00000416438 CPSF1Q10570 1443 aaKnown RBP18.44■□□□□ 0.54
LINC00475-202ENST00000416438 BMP2KLQ5H9B9 411 aa18.44■□□□□ 0.54
LINC00475-202ENST00000416438 GCC1Q96CN9 775 aa18.44■□□□□ 0.54
LINC00475-202ENST00000416438 CFAP44Q96MT7 982 aa18.44■□□□□ 0.54
LINC00475-202ENST00000416438 ESF1Q9H501 851 aaKnown RBP18.44■□□□□ 0.54
LINC00475-202ENST00000416438 KRT24Q2M2I5 525 aa18.43■□□□□ 0.54
LINC00475-202ENST00000416438 AEBP1Q8IUX7 1158 aa18.43■□□□□ 0.54
LINC00475-202ENST00000416438 ABCC4O15439 1325 aa18.43■□□□□ 0.54
LINC00475-202ENST00000416438 EDC4Q6P2E9 1401 aaKnown RBP18.42■□□□□ 0.54
LINC00475-202ENST00000416438 FOXD4L1Q9NU39 408 aa18.42■□□□□ 0.54
LINC00475-202ENST00000416438 PTCH1Q13635 1447 aa18.42■□□□□ 0.54
LINC00475-202ENST00000416438 NRXN3Q9Y4C0 1643 aa18.42■□□□□ 0.54
LINC00475-202ENST00000416438 NUTM2FA1L443 756 aa18.42■□□□□ 0.54
LINC00475-202ENST00000416438 TRAK2O60296 914 aa18.42■□□□□ 0.54
LINC00475-202ENST00000416438 TBC1D9Q6ZT07 1266 aa18.42■□□□□ 0.54
LINC00475-202ENST00000416438 KIF2CQ99661 725 aa18.42■□□□□ 0.54
LINC00475-202ENST00000416438 RBM42Q9BTD8 480 aaKnown RBP18.42■□□□□ 0.54
LINC00475-202ENST00000416438 CCDC61Q9Y6R9 512 aa18.42■□□□□ 0.54
LINC00475-202ENST00000416438 CPS1P31327 1500 aa18.41■□□□□ 0.54
LINC00475-202ENST00000416438 CD2BP2O95400 341 aaKnown RBP18.41■□□□□ 0.54
LINC00475-202ENST00000416438 PIK3R4Q99570 1358 aa18.41■□□□□ 0.54
LINC00475-202ENST00000416438 L1TD1Q5T7N2 865 aaKnown RBP18.4■□□□□ 0.54
LINC00475-202ENST00000416438 XRCC6P12956 609 aaKnown RBP eCLIP18.39■□□□□ 0.53
LINC00475-202ENST00000416438 CHMP4BQ9H444 224 aaKnown RBP18.39■□□□□ 0.53
LINC00475-202ENST00000416438 HSP90AB1P08238 724 aaKnown RBP18.39■□□□□ 0.53
LINC00475-202ENST00000416438 SULT6B1Q6IMI4 303 aa18.39■□□□□ 0.53
LINC00475-202ENST00000416438 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.39■□□□□ 0.53
LINC00475-202ENST00000416438 SNX21Q969T3 373 aa18.39■□□□□ 0.53
LINC00475-202ENST00000416438 AATKQ6ZMQ8 1374 aa18.38■□□□□ 0.53
LINC00475-202ENST00000416438 PRR36Q9H6K5 1346 aa18.38■□□□□ 0.53
LINC00475-202ENST00000416438 GOLGA6L3A6NEY3 463 aa18.38■□□□□ 0.53
LINC00475-202ENST00000416438 DDIT3P35638 169 aa18.38■□□□□ 0.53
LINC00475-202ENST00000416438 LMOD3Q0VAK6 560 aa18.38■□□□□ 0.53
LINC00475-202ENST00000416438 CDK12Q9NYV4 1490 aaPredicted RBP18.38■□□□□ 0.53
LINC00475-202ENST00000416438 C16orf71Q8IYS4 520 aaPredicted RBP18.38■□□□□ 0.53
LINC00475-202ENST00000416438 PANK2Q9BZ23 570 aa18.38■□□□□ 0.53
LINC00475-202ENST00000416438 API5Q9BZZ5 524 aaKnown RBP18.38■□□□□ 0.53
LINC00475-202ENST00000416438 SOX12O15370 315 aa18.37■□□□□ 0.53
LINC00475-202ENST00000416438 MCM10Q7L590 875 aa18.37■□□□□ 0.53
LINC00475-202ENST00000416438 FAM43AQ8N2R8 423 aa18.37■□□□□ 0.53
LINC00475-202ENST00000416438 GSPT1P15170 499 aaKnown RBP18.36■□□□□ 0.53
LINC00475-202ENST00000416438 EIF4A2Q14240 407 aaKnown RBP18.36■□□□□ 0.53
LINC00475-202ENST00000416438 TNPO1Q92973 898 aaKnown RBP18.35■□□□□ 0.53
LINC00475-202ENST00000416438 FSD2A1L4K1 749 aa18.35■□□□□ 0.53
LINC00475-202ENST00000416438 NCOA3Q9Y6Q9 1424 aa18.35■□□□□ 0.53
LINC00475-202ENST00000416438 PLEKHM2Q8IWE5 1019 aa18.34■□□□□ 0.53
LINC00475-202ENST00000416438 APBB1O00213 710 aa18.33■□□□□ 0.53
LINC00475-202ENST00000416438 RRAGDQ9NQL2 400 aaPredicted RBP18.33■□□□□ 0.53
LINC00475-202ENST00000416438 TNRQ92752 1358 aa18.33■□□□□ 0.53
LINC00475-202ENST00000416438 HSP90AA1P07900 732 aaKnown RBP18.33■□□□□ 0.52
LINC00475-202ENST00000416438 HSP90AB2PQ58FF8 381 aa18.33■□□□□ 0.52
LINC00475-202ENST00000416438 OTUD7AQ8TE49 926 aaPredicted RBP18.33■□□□□ 0.52
LINC00475-202ENST00000416438 MIS18AQ9NYP9 233 aa18.32■□□□□ 0.52
LINC00475-202ENST00000416438 DCTPP1Q9H773 170 aa18.32■□□□□ 0.52
LINC00475-202ENST00000416438 KIF13AQ9H1H9 1805 aa18.32■□□□□ 0.52
LINC00475-202ENST00000416438 CDC45O75419 566 aa18.31■□□□□ 0.52
LINC00475-202ENST00000416438 DDX11L8A8MPP1 907 aa18.3■□□□□ 0.52
LINC00475-202ENST00000416438 SMARCA5O60264 1052 aaPredicted RBP18.3■□□□□ 0.52
LINC00475-202ENST00000416438 HDGFP51858 240 aaKnown RBP18.3■□□□□ 0.52
LINC00475-202ENST00000416438 DLG5Q8TDM6 1919 aa18.3■□□□□ 0.52
LINC00475-202ENST00000416438 K7ELQ4 463 aaPredicted RBP18.3■□□□□ 0.52
LINC00475-202ENST00000416438 INTS3Q68E01 1043 aaKnown RBP18.3■□□□□ 0.52
LINC00475-202ENST00000416438 GAS2L2Q8NHY3 880 aa18.3■□□□□ 0.52
LINC00475-202ENST00000416438 TTC21BQ7Z4L5 1316 aa18.3■□□□□ 0.52
LINC00475-202ENST00000416438 ROBO2Q9HCK4 1378 aa18.3■□□□□ 0.52
LINC00475-202ENST00000416438 CHL1O00533 1208 aa18.29■□□□□ 0.52
LINC00475-202ENST00000416438 ACEP12821 1306 aa18.29■□□□□ 0.52
LINC00475-202ENST00000416438 RAB3GAP1Q15042 981 aa18.29■□□□□ 0.52
LINC00475-202ENST00000416438 TMEM2Q9UHN6 1383 aa18.29■□□□□ 0.52
LINC00475-202ENST00000416438 TECPR2O15040 1411 aa18.28■□□□□ 0.52
LINC00475-202ENST00000416438 FOXO3O43524 673 aa18.28■□□□□ 0.52
LINC00475-202ENST00000416438 MEIS3Q99687 375 aa18.28■□□□□ 0.52
LINC00475-202ENST00000416438 TTC22Q5TAA0 569 aa18.27■□□□□ 0.52
LINC00475-202ENST00000416438 ANKRD44Q8N8A2 993 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms