RNA–Protein interactions for RNA: ENST00000415944.3

MECP2-204, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 5

Gene MECP2, Length 413 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-204ENST00000415944 DUSP27Q5VZP5 1158 aa11.26□□□□□ -0.61
MECP2-204ENST00000415944 RBM19Q9Y4C8 960 aaKnown RBP11.26□□□□□ -0.61
MECP2-204ENST00000415944 NFAT5O94916 1531 aa11.25□□□□□ -0.61
MECP2-204ENST00000415944 PDE3AQ14432 1141 aa11.25□□□□□ -0.61
MECP2-204ENST00000415944 NME9Q86XW9 330 aa11.25□□□□□ -0.61
MECP2-204ENST00000415944 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.25□□□□□ -0.615e-7■■■■□ 20.4
MECP2-204ENST00000415944 ABTB2Q8N961 1025 aa11.25□□□□□ -0.61
MECP2-204ENST00000415944 NEFMP07197 916 aa11.24□□□□□ -0.61
MECP2-204ENST00000415944 LMOD2Q6P5Q4 547 aa11.24□□□□□ -0.61
MECP2-204ENST00000415944 MYH16Q9H6N6 1097 aa11.24□□□□□ -0.61
MECP2-204ENST00000415944 FYB1O15117 783 aa11.23□□□□□ -0.61
MECP2-204ENST00000415944 NLRP6P59044 892 aa11.23□□□□□ -0.61
MECP2-204ENST00000415944 ZNF428Q96B54 188 aa11.23□□□□□ -0.61
MECP2-204ENST00000415944 PHF23Q9BUL5 403 aaPredicted RBP11.23□□□□□ -0.61
MECP2-204ENST00000415944 IL16Q14005 1332 aa11.23□□□□□ -0.61
MECP2-204ENST00000415944 LTN1O94822 1766 aa11.23□□□□□ -0.61
MECP2-204ENST00000415944 CALD1Q05682 793 aaKnown RBP11.22□□□□□ -0.61
MECP2-204ENST00000415944 PLCH1Q4KWH8 1693 aa11.22□□□□□ -0.61
MECP2-204ENST00000415944 NUTM2GQ5VZR2 741 aa11.22□□□□□ -0.61
MECP2-204ENST00000415944 ZRANB1Q9UGI0 708 aa11.22□□□□□ -0.61
MECP2-204ENST00000415944 NWD2Q9ULI1 1742 aa11.22□□□□□ -0.61
MECP2-204ENST00000415944 MAP2P11137 1827 aaKnown RBP11.21□□□□□ -0.61
MECP2-204ENST00000415944 COL18A1P39060 1754 aa11.21□□□□□ -0.61
MECP2-204ENST00000415944 COL14A1Q05707 1796 aaKnown RBP11.21□□□□□ -0.61
MECP2-204ENST00000415944 LMO7Q8WWI1 1683 aa11.21□□□□□ -0.61
MECP2-204ENST00000415944 ABCC6O95255 1503 aa11.21□□□□□ -0.61
MECP2-204ENST00000415944 CPDO75976 1380 aa11.21□□□□□ -0.61
MECP2-204ENST00000415944 B4GALNT3Q6L9W6 998 aa11.21□□□□□ -0.61
MECP2-204ENST00000415944 CABLES1Q8TDN4 633 aa11.21□□□□□ -0.61
MECP2-204ENST00000415944 AATKQ6ZMQ8 1374 aa11.2□□□□□ -0.62
MECP2-204ENST00000415944 APAF1O14727 1248 aa11.2□□□□□ -0.62
MECP2-204ENST00000415944 GCP02774 474 aa11.2□□□□□ -0.62
MECP2-204ENST00000415944 MTHFSP49914 203 aa11.2□□□□□ -0.62
MECP2-204ENST00000415944 IRX6P78412 446 aaPredicted RBP11.2□□□□□ -0.62
MECP2-204ENST00000415944 CENPQQ7L2Z9 268 aaPredicted RBP11.2□□□□□ -0.62
MECP2-204ENST00000415944 COG3Q96JB2 828 aa11.2□□□□□ -0.62
MECP2-204ENST00000415944 GGNBP2Q9H3C7 697 aa11.2□□□□□ -0.62
MECP2-204ENST00000415944 NRAPQ86VF7 1730 aa11.2□□□□□ -0.62
MECP2-204ENST00000415944 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.2□□□□□ -0.62
MECP2-204ENST00000415944 WWC1Q8IX03 1113 aa11.19□□□□□ -0.62
MECP2-204ENST00000415944 KCNH5Q8NCM2 988 aa11.19□□□□□ -0.62
MECP2-204ENST00000415944 CHMP4BQ9H444 224 aaKnown RBP11.19□□□□□ -0.62
MECP2-204ENST00000415944 RGPD5Q99666 1765 aa11.18□□□□□ -0.62
MECP2-204ENST00000415944 KIAA0232Q92628 1395 aa11.18□□□□□ -0.62
MECP2-204ENST00000415944 NUTM2BA6NNL0 878 aaPredicted RBP11.18□□□□□ -0.62
MECP2-204ENST00000415944 NUTM2EB1AL46 878 aaPredicted RBP11.18□□□□□ -0.62
MECP2-204ENST00000415944 FCHSD2O94868 740 aa11.18□□□□□ -0.62
MECP2-204ENST00000415944 HAP1P54257 671 aaPredicted RBP11.18□□□□□ -0.62
MECP2-204ENST00000415944 NUTM2AQ8IVF1 878 aaPredicted RBP11.18□□□□□ -0.62
MECP2-204ENST00000415944 CDCA7LQ96GN5 454 aa11.18□□□□□ -0.62
MECP2-204ENST00000415944 SLIT2O94813 1529 aa11.18□□□□□ -0.62
MECP2-204ENST00000415944 PEAK1Q9H792 1746 aa11.18□□□□□ -0.62
MECP2-204ENST00000415944 MAPK8IP3Q9UPT6 1336 aa11.17□□□□□ -0.62
MECP2-204ENST00000415944 DIAPH1O60610 1272 aaKnown RBP11.16□□□□□ -0.62
MECP2-204ENST00000415944 ADAMTS2O95450 1211 aa11.16□□□□□ -0.62
MECP2-204ENST00000415944 ANP32AP39687 249 aaKnown RBP11.16□□□□□ -0.62
MECP2-204ENST00000415944 LMOD3Q0VAK6 560 aa11.16□□□□□ -0.62
MECP2-204ENST00000415944 ARHGEF25Q86VW2 580 aa11.16□□□□□ -0.62
MECP2-204ENST00000415944 TCP11L2Q8N4U5 519 aa11.16□□□□□ -0.62
MECP2-204ENST00000415944 RTL1A6NKG5 1358 aa11.16□□□□□ -0.62
MECP2-204ENST00000415944 PLEKHG5O94827 1062 aa11.15□□□□□ -0.62
MECP2-204ENST00000415944 ZC3H6P61129 1189 aaKnown RBP11.15□□□□□ -0.62
MECP2-204ENST00000415944 PRDM11Q9NQV5 511 aa11.15□□□□□ -0.62
MECP2-204ENST00000415944 KIF24Q5T7B8 1368 aa11.15□□□□□ -0.63
MECP2-204ENST00000415944 FAM208AQ9UK61 1670 aaKnown RBP11.14□□□□□ -0.63
MECP2-204ENST00000415944 CAMTA1Q9Y6Y1 1673 aa11.14□□□□□ -0.63
MECP2-204ENST00000415944 FAM83GA6ND36 823 aa11.14□□□□□ -0.63
MECP2-204ENST00000415944 U2AF1L5P0DN76 240 aaPredicted RBP11.14□□□□□ -0.63
MECP2-204ENST00000415944 U2AF1Q01081 240 aaKnown RBP eCLIP11.14□□□□□ -0.63
MECP2-204ENST00000415944 MEX3CQ5U5Q3 659 aaKnown RBP11.14□□□□□ -0.63
MECP2-204ENST00000415944 FNBP4Q8N3X1 1017 aaPredicted RBP11.14□□□□□ -0.63
MECP2-204ENST00000415944 EXOC6Q8TAG9 804 aa11.14□□□□□ -0.63
MECP2-204ENST00000415944 SALL2Q9Y467 1007 aaPredicted RBP11.14□□□□□ -0.63
MECP2-204ENST00000415944 BCL9LQ86UU0 1499 aa11.13□□□□□ -0.63
MECP2-204ENST00000415944 MAP3K19Q56UN5 1328 aa11.13□□□□□ -0.63
MECP2-204ENST00000415944 SOX12O15370 315 aa11.13□□□□□ -0.63
MECP2-204ENST00000415944 C8orf37Q96NL8 207 aa11.13□□□□□ -0.63
MECP2-204ENST00000415944 COL5A2P05997 1499 aaPredicted RBP11.12□□□□□ -0.63
MECP2-204ENST00000415944 CDK12Q9NYV4 1490 aaPredicted RBP11.12□□□□□ -0.63
MECP2-204ENST00000415944 AFF2P51816 1311 aa11.12□□□□□ -0.63
MECP2-204ENST00000415944 FBLN1P23142 703 aa11.12□□□□□ -0.63
MECP2-204ENST00000415944 CHRNA2Q15822 529 aa11.12□□□□□ -0.63
MECP2-204ENST00000415944 FLT4P35916 1363 aa11.12□□□□□ -0.63
MECP2-204ENST00000415944 COL3A1P02461 1466 aaPredicted RBP11.12□□□□□ -0.63
MECP2-204ENST00000415944 ATRNO75882 1429 aa11.11□□□□□ -0.63
MECP2-204ENST00000415944 IPO8O15397 1037 aaKnown RBP11.11□□□□□ -0.63
MECP2-204ENST00000415944 BRPF1P55201 1214 aaPredicted RBP11.11□□□□□ -0.63
MECP2-204ENST00000415944 RRS1Q15050 365 aaKnown RBP11.11□□□□□ -0.63
MECP2-204ENST00000415944 ERICH6Q7L0X2 663 aa11.11□□□□□ -0.63
MECP2-204ENST00000415944 IP6K1Q92551 441 aa11.11□□□□□ -0.63
MECP2-204ENST00000415944 NGLY1Q96IV0 654 aa11.11□□□□□ -0.63
MECP2-204ENST00000415944 POLKQ9UBT6 870 aa11.11□□□□□ -0.63
MECP2-204ENST00000415944 RGPD2P0DJD1 1756 aa11.11□□□□□ -0.63
MECP2-204ENST00000415944 WNK3Q9BYP7 1800 aa11.1□□□□□ -0.63
MECP2-204ENST00000415944 EIF5BO60841 1220 aaKnown RBP11.1□□□□□ -0.63
MECP2-204ENST00000415944 CANXP27824 592 aaKnown RBP11.1□□□□□ -0.63
MECP2-204ENST00000415944 HOXC9P31274 260 aa11.1□□□□□ -0.63
MECP2-204ENST00000415944 ALDH1L2Q3SY69 923 aa11.1□□□□□ -0.63
MECP2-204ENST00000415944 CCDC146Q8IYE0 955 aa11.1□□□□□ -0.63
MECP2-204ENST00000415944 CRBNQ96SW2 442 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms