RNA–Protein interactions for RNA: ENST00000415758.1

DDX56-202, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,287 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-202ENST00000415758 EVC2Q86UK5 1308 aa22.21■■□□□ 1.15
DDX56-202ENST00000415758 WDR17Q8IZU2 1322 aa22.21■■□□□ 1.15
DDX56-202ENST00000415758 ZBTB7CA1YPR0 619 aa22.2■■□□□ 1.14
DDX56-202ENST00000415758 ARHGEF25Q86VW2 580 aa22.19■■□□□ 1.14
DDX56-202ENST00000415758 KCNH5Q8NCM2 988 aa22.18■■□□□ 1.14
DDX56-202ENST00000415758 L3MBTL2Q969R5 705 aa22.18■■□□□ 1.14
DDX56-202ENST00000415758 WNK3Q9BYP7 1800 aa22.17■■□□□ 1.14
DDX56-202ENST00000415758 CPSF1Q10570 1443 aaKnown RBP22.17■■□□□ 1.14
DDX56-202ENST00000415758 NINLQ9Y2I6 1382 aa22.17■■□□□ 1.14
DDX56-202ENST00000415758 MARCH10Q8NA82 808 aaPredicted RBP22.17■■□□□ 1.14
DDX56-202ENST00000415758 TTC21BQ7Z4L5 1316 aa22.16■■□□□ 1.14
DDX56-202ENST00000415758 PTF1AQ7RTS3 328 aa22.16■■□□□ 1.14
DDX56-202ENST00000415758 PPP1R1BQ9UD71 204 aaPredicted RBP22.16■■□□□ 1.14
DDX56-202ENST00000415758 TRPM1Q7Z4N2 1603 aa22.16■■□□□ 1.14
DDX56-202ENST00000415758 YY1P25490 414 aa22.15■■□□□ 1.14
DDX56-202ENST00000415758 PROM2Q8N271 834 aa22.15■■□□□ 1.14
DDX56-202ENST00000415758 CARD10Q9BWT7 1032 aa22.15■■□□□ 1.14
DDX56-202ENST00000415758 TTC21AQ8NDW8 1320 aa22.14■■□□□ 1.14
DDX56-202ENST00000415758 ANO8Q9HCE9 1232 aaPredicted RBP22.14■■□□□ 1.13
DDX56-202ENST00000415758 AKAP12Q02952 1782 aa22.14■■□□□ 1.13
DDX56-202ENST00000415758 RGPD5Q99666 1765 aa22.14■■□□□ 1.13
DDX56-202ENST00000415758 CASZ1Q86V15 1759 aa22.12■■□□□ 1.13
DDX56-202ENST00000415758 DCAF8L1A6NGE4 600 aa22.1■■□□□ 1.13
DDX56-202ENST00000415758 EXOC5O00471 708 aa22.1■■□□□ 1.13
DDX56-202ENST00000415758 NFAT5O94916 1531 aa22.1■■□□□ 1.13
DDX56-202ENST00000415758 ABCC6O95255 1503 aa22.09■■□□□ 1.13
DDX56-202ENST00000415758 CSB-PGBD3P0DP91 1061 aa22.08■■□□□ 1.13
DDX56-202ENST00000415758 PDGFDQ9GZP0 370 aaPredicted RBP22.08■■□□□ 1.13
DDX56-202ENST00000415758 CCDC7Q96M83 1385 aa22.08■■□□□ 1.12
DDX56-202ENST00000415758 TXNRD1Q16881 649 aa22.07■■□□□ 1.12
DDX56-202ENST00000415758 ROCK2O75116 1388 aaKnown RBP22.07■■□□□ 1.12
DDX56-202ENST00000415758 KTN1Q86UP2 1357 aaKnown RBP22.06■■□□□ 1.12
DDX56-202ENST00000415758 SOX12O15370 315 aa22.05■■□□□ 1.12
DDX56-202ENST00000415758 USP31Q70CQ4 1352 aa22.04■■□□□ 1.12
DDX56-202ENST00000415758 PTGER2P43116 358 aa22.04■■□□□ 1.12
DDX56-202ENST00000415758 SLC15A2Q16348 729 aa22.04■■□□□ 1.12
DDX56-202ENST00000415758 SIN3AQ96ST3 1273 aa22.04■■□□□ 1.12
DDX56-202ENST00000415758 STK32BQ9NY57 414 aa22.03■■□□□ 1.12
DDX56-202ENST00000415758 TNS2Q63HR2 1409 aa22.03■■□□□ 1.12
DDX56-202ENST00000415758 MON2Q7Z3U7 1717 aa22.03■■□□□ 1.12
DDX56-202ENST00000415758 SBNO2Q9Y2G9 1366 aa22.02■■□□□ 1.12
DDX56-202ENST00000415758 USP54Q70EL1 1684 aa22.02■■□□□ 1.12
DDX56-202ENST00000415758 ZBTB7AO95365 584 aa22.02■■□□□ 1.12
DDX56-202ENST00000415758 ERBB3P21860 1342 aa22■■□□□ 1.11
DDX56-202ENST00000415758 MYOM1P52179 1685 aa21.99■■□□□ 1.11
DDX56-202ENST00000415758 NHSQ6T4R5 1651 aa21.99■■□□□ 1.11
DDX56-202ENST00000415758 UTRNP46939 3433 aa21.98■■□□□ 1.11
DDX56-202ENST00000415758 ATF5Q9Y2D1 282 aaPredicted RBP21.98■■□□□ 1.11
DDX56-202ENST00000415758 CD163L1Q9NR16 1453 aa21.97■■□□□ 1.11
DDX56-202ENST00000415758 NEUROD1Q13562 356 aa21.97■■□□□ 1.11
DDX56-202ENST00000415758 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.97■■□□□ 1.11
DDX56-202ENST00000415758 SGIP1Q9BQI5 828 aa21.97■■□□□ 1.11
DDX56-202ENST00000415758 MTFR1LQ9H019 292 aa21.97■■□□□ 1.11
DDX56-202ENST00000415758 IL2RBP14784 551 aa21.95■■□□□ 1.1
DDX56-202ENST00000415758 NME9Q86XW9 330 aa21.95■■□□□ 1.1
DDX56-202ENST00000415758 SYT17Q9BSW7 474 aa21.95■■□□□ 1.1
DDX56-202ENST00000415758 NLRP2Q9NX02 1062 aa21.95■■□□□ 1.1
DDX56-202ENST00000415758 LTN1O94822 1766 aa21.94■■□□□ 1.1
DDX56-202ENST00000415758 ACSBG1Q96GR2 724 aa21.93■■□□□ 1.1
DDX56-202ENST00000415758 FHDC1Q9C0D6 1143 aaPredicted RBP21.93■■□□□ 1.1
DDX56-202ENST00000415758 PAPPAQ13219 1627 aa21.92■■□□□ 1.1
DDX56-202ENST00000415758 ANKRD24Q8TF21 1146 aa21.92■■□□□ 1.1
DDX56-202ENST00000415758 HDGFL2Q7Z4V5 671 aaPredicted RBP21.91■■□□□ 1.1
DDX56-202ENST00000415758 PUS7Q96PZ0 661 aaKnown RBP21.91■■□□□ 1.1
DDX56-202ENST00000415758 SLC12A5Q9H2X9 1139 aa21.91■■□□□ 1.1
DDX56-202ENST00000415758 BTAF1O14981 1849 aa21.91■■□□□ 1.1
DDX56-202ENST00000415758 EDC4Q6P2E9 1401 aaKnown RBP21.9■■□□□ 1.1
DDX56-202ENST00000415758 CARD11Q9BXL7 1154 aa21.9■■□□□ 1.1
DDX56-202ENST00000415758 TMC1Q8TDI8 760 aa21.89■■□□□ 1.09
DDX56-202ENST00000415758 KAT6BQ8WYB5 2073 aa21.89■■□□□ 1.09
DDX56-202ENST00000415758 ARXQ96QS3 562 aa21.88■■□□□ 1.09
DDX56-202ENST00000415758 TERF2IPQ9NYB0 399 aa21.88■■□□□ 1.09
DDX56-202ENST00000415758 MAP3K5Q99683 1374 aa21.87■■□□□ 1.09
DDX56-202ENST00000415758 ZNF784Q8NCA9 323 aaPredicted RBP21.87■■□□□ 1.09
DDX56-202ENST00000415758 LRRC4BQ9NT99 713 aa21.87■■□□□ 1.09
DDX56-202ENST00000415758 IP6K1Q92551 441 aa21.86■■□□□ 1.09
DDX56-202ENST00000415758 CHD4Q14839 1912 aa21.85■■□□□ 1.09
DDX56-202ENST00000415758 A0A1W2PP64 1363 aa21.85■■□□□ 1.09
DDX56-202ENST00000415758 ZNF827Q17R98 1081 aa21.84■■□□□ 1.09
DDX56-202ENST00000415758 SLC27A3Q5K4L6 730 aa21.84■■□□□ 1.09
DDX56-202ENST00000415758 SLC16A10Q8TF71 515 aa21.84■■□□□ 1.09
DDX56-202ENST00000415758 AKT1S1Q96B36 256 aa21.84■■□□□ 1.09
DDX56-202ENST00000415758 FAM208AQ9UK61 1670 aaKnown RBP21.83■■□□□ 1.09
DDX56-202ENST00000415758 QSER1Q2KHR3 1735 aa21.82■■□□□ 1.08
DDX56-202ENST00000415758 COL24A1Q17RW2 1714 aa21.8■■□□□ 1.08
DDX56-202ENST00000415758 DDX54Q8TDD1 881 aaKnown RBP21.8■■□□□ 1.08
DDX56-202ENST00000415758 ANKRD36BQ8N2N9 1353 aa21.76■■□□□ 1.07
DDX56-202ENST00000415758 SLC24A1O60721 1099 aa21.76■■□□□ 1.07
DDX56-202ENST00000415758 LTV1Q96GA3 475 aaPredicted RBP21.76■■□□□ 1.07
DDX56-202ENST00000415758 TESK2Q96S53 571 aa21.76■■□□□ 1.07
DDX56-202ENST00000415758 MAP3K19Q56UN5 1328 aa21.76■■□□□ 1.07
DDX56-202ENST00000415758 PNPLA7Q6ZV29 1317 aa21.76■■□□□ 1.07
DDX56-202ENST00000415758 HOXC9P31274 260 aa21.75■■□□□ 1.07
DDX56-202ENST00000415758 PRIM1P49642 420 aaKnown RBP21.75■■□□□ 1.07
DDX56-202ENST00000415758 COG3Q96JB2 828 aa21.75■■□□□ 1.07
DDX56-202ENST00000415758 LY75O60449 1722 aa21.75■■□□□ 1.07
DDX56-202ENST00000415758 NSD2O96028 1365 aa21.74■■□□□ 1.07
DDX56-202ENST00000415758 POLD1P28340 1107 aa21.73■■□□□ 1.07
DDX56-202ENST00000415758 ZCRB1Q8TBF4 217 aaKnown RBP21.73■■□□□ 1.07
DDX56-202ENST00000415758 TFCP2L1Q9NZI6 479 aa21.73■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms