RNA–Protein interactions for RNA: ENST00000415409.5

HDAC8-211, Transcript of histone deacetylase 8, humanhuman

TSL 5

Gene HDAC8, Length 913 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-211ENST00000415409 SLIT1O75093 1534 aa8.92□□□□□ -0.98
HDAC8-211ENST00000415409 FAM135BQ49AJ0 1406 aa8.92□□□□□ -0.98
HDAC8-211ENST00000415409 VARS2Q5ST30 1063 aaKnown RBP8.92□□□□□ -0.98
HDAC8-211ENST00000415409 SLC26A8Q96RN1 970 aa8.92□□□□□ -0.98
HDAC8-211ENST00000415409 TERF2IPQ9NYB0 399 aa8.92□□□□□ -0.98
HDAC8-211ENST00000415409 TECPR2O15040 1411 aa8.91□□□□□ -0.98
HDAC8-211ENST00000415409 ADAMTS13Q76LX8 1427 aa8.91□□□□□ -0.98
HDAC8-211ENST00000415409 HDGFL2Q7Z4V5 671 aaPredicted RBP8.91□□□□□ -0.98
HDAC8-211ENST00000415409 PNISRQ8TF01 805 aaKnown RBP8.91□□□□□ -0.98
HDAC8-211ENST00000415409 CARD14Q9BXL6 1004 aa8.91□□□□□ -0.98
HDAC8-211ENST00000415409 ANKRD36BQ8N2N9 1353 aa8.9□□□□□ -0.98
HDAC8-211ENST00000415409 CGNL1Q0VF96 1302 aa8.9□□□□□ -0.98
HDAC8-211ENST00000415409 WASLO00401 505 aaPredicted RBP8.9□□□□□ -0.98
HDAC8-211ENST00000415409 PPP2R1AP30153 589 aa8.9□□□□□ -0.98
HDAC8-211ENST00000415409 AMOTL2Q9Y2J4 779 aa8.9□□□□□ -0.98
HDAC8-211ENST00000415409 TULP4Q9NRJ4 1543 aa8.9□□□□□ -0.99
HDAC8-211ENST00000415409 NSD3Q9BZ95 1437 aa8.89□□□□□ -0.99
HDAC8-211ENST00000415409 PLEKHH1Q9ULM0 1364 aa8.89□□□□□ -0.99
HDAC8-211ENST00000415409 UBR1Q8IWV7 1749 aa8.89□□□□□ -0.99
HDAC8-211ENST00000415409 MORC1Q86VD1 984 aa8.89□□□□□ -0.99
HDAC8-211ENST00000415409 MED14O60244 1454 aa8.89□□□□□ -0.99
HDAC8-211ENST00000415409 CABP1Q9NZU7 370 aa8.88□□□□□ -0.99
HDAC8-211ENST00000415409 QRICH2Q9H0J4 1663 aa8.88□□□□□ -0.99
HDAC8-211ENST00000415409 NSD2O96028 1365 aa8.87□□□□□ -0.99
HDAC8-211ENST00000415409 LTBP4Q8N2S1 1624 aa8.87□□□□□ -0.99
HDAC8-211ENST00000415409 PIK3R4Q99570 1358 aa8.87□□□□□ -0.99
HDAC8-211ENST00000415409 ROBO2Q9HCK4 1378 aa8.87□□□□□ -0.99
HDAC8-211ENST00000415409 CEP170BQ9Y4F5 1589 aaPredicted RBP8.87□□□□□ -0.99
HDAC8-211ENST00000415409 WDR43Q15061 677 aaKnown RBP eCLIP8.87□□□□□ -0.99
HDAC8-211ENST00000415409 ARSIQ5FYB1 569 aa8.87□□□□□ -0.99
HDAC8-211ENST00000415409 GPR153Q6NV75 609 aa8.87□□□□□ -0.99
HDAC8-211ENST00000415409 NUDT16Q96DE0 195 aaKnown RBP8.87□□□□□ -0.99
HDAC8-211ENST00000415409 GTF3C3Q9Y5Q9 886 aa8.87□□□□□ -0.99
HDAC8-211ENST00000415409 MYO5BQ9ULV0 1848 aa8.87□□□□□ -0.99
HDAC8-211ENST00000415409 ZBED9Q6R2W3 1325 aa8.86□□□□□ -0.99
HDAC8-211ENST00000415409 ARHGEF28Q8N1W1 1705 aaKnown RBP8.86□□□□□ -0.99
HDAC8-211ENST00000415409 NRXN3Q9Y4C0 1643 aa8.86□□□□□ -0.99
HDAC8-211ENST00000415409 A0A1W2PP64 1363 aa8.86□□□□□ -0.99
HDAC8-211ENST00000415409 ERICH6Q7L0X2 663 aa8.85□□□□□ -0.99
HDAC8-211ENST00000415409 PTCH1Q13635 1447 aa8.85□□□□□ -0.99
HDAC8-211ENST00000415409 PTPRUQ92729 1446 aa8.85□□□□□ -0.99
HDAC8-211ENST00000415409 DIP2AQ14689 1571 aa8.85□□□□□ -0.99
HDAC8-211ENST00000415409 INSRP06213 1382 aa8.85□□□□□ -0.99
HDAC8-211ENST00000415409 CPS1P31327 1500 aa8.85□□□□□ -0.99
HDAC8-211ENST00000415409 C2orf72A6NCS6 295 aa8.84□□□□□ -0.99
HDAC8-211ENST00000415409 TMC2Q8TDI7 906 aa8.84□□□□□ -0.99
HDAC8-211ENST00000415409 CFAP53Q96M91 514 aa8.84□□□□□ -0.99
HDAC8-211ENST00000415409 KCNA6P17658 529 aa8.83□□□□□ -1
HDAC8-211ENST00000415409 MYOM1P52179 1685 aa8.83□□□□□ -1
HDAC8-211ENST00000415409 ATP7BP35670 1465 aa8.83□□□□□ -1
HDAC8-211ENST00000415409 NPHP4O75161 1426 aaPredicted RBP8.82□□□□□ -1
HDAC8-211ENST00000415409 PPIP5K1Q6PFW1 1433 aa8.82□□□□□ -1
HDAC8-211ENST00000415409 FYB1O15117 783 aa8.82□□□□□ -1
HDAC8-211ENST00000415409 TNNT2P45379 298 aaPredicted RBP8.82□□□□□ -1
HDAC8-211ENST00000415409 ZNF687Q8N1G0 1237 aa8.82□□□□□ -1
HDAC8-211ENST00000415409 KHSRPQ92945 711 aaKnown RBP eCLIP8.82□□□□□ -1
HDAC8-211ENST00000415409 SETD1AO15047 1707 aaKnown RBP8.82□□□□□ -1
HDAC8-211ENST00000415409 NCKAP5LQ9HCH0 1330 aa8.81□□□□□ -1
HDAC8-211ENST00000415409 PLEKHG3A1L390 1219 aa8.81□□□□□ -1
HDAC8-211ENST00000415409 GGNBP2Q9H3C7 697 aa8.81□□□□□ -1
HDAC8-211ENST00000415409 ADAMTS8Q9UP79 889 aa8.81□□□□□ -1
HDAC8-211ENST00000415409 POLR3AO14802 1390 aaPredicted RBP8.81□□□□□ -1
HDAC8-211ENST00000415409 PRR36Q9H6K5 1346 aa8.8□□□□□ -1
HDAC8-211ENST00000415409 EDC4Q6P2E9 1401 aaKnown RBP8.8□□□□□ -1
HDAC8-211ENST00000415409 NEFLP07196 543 aa8.8□□□□□ -1
HDAC8-211ENST00000415409 MTHFSP49914 203 aa8.8□□□□□ -1
HDAC8-211ENST00000415409 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.8□□□□□ -1
HDAC8-211ENST00000415409 CD163L1Q9NR16 1453 aa8.8□□□□□ -1
HDAC8-211ENST00000415409 KNDC1Q76NI1 1749 aa8.8□□□□□ -1
HDAC8-211ENST00000415409 CPSF1Q10570 1443 aaKnown RBP8.8□□□□□ -1
HDAC8-211ENST00000415409 KIF3CO14782 793 aa8.79□□□□□ -1
HDAC8-211ENST00000415409 PDE3BQ13370 1112 aa8.79□□□□□ -1
HDAC8-211ENST00000415409 NUTM2FA1L443 756 aa8.78□□□□□ -1
HDAC8-211ENST00000415409 NUDT7P0C024 238 aa8.78□□□□□ -1
HDAC8-211ENST00000415409 C14orf37Q86TY3 774 aa8.78□□□□□ -1
HDAC8-211ENST00000415409 NGDNQ8NEJ9 315 aaKnown RBP8.78□□□□□ -1
HDAC8-211ENST00000415409 RNF166Q96A37 237 aaPredicted RBP8.78□□□□□ -1
HDAC8-211ENST00000415409 COG3Q96JB2 828 aa8.78□□□□□ -1
HDAC8-211ENST00000415409 NUDCQ9Y266 331 aa8.78□□□□□ -1
HDAC8-211ENST00000415409 USP32Q8NFA0 1604 aa8.78□□□□□ -1
HDAC8-211ENST00000415409 BLMP54132 1417 aaPredicted RBP8.78□□□□□ -1
HDAC8-211ENST00000415409 ACEP12821 1306 aa8.78□□□□□ -1
HDAC8-211ENST00000415409 ADGRB2O60241 1585 aa8.78□□□□□ -1
HDAC8-211ENST00000415409 PPP1R37O75864 691 aa8.77□□□□□ -1.01
HDAC8-211ENST00000415409 NGEFQ8N5V2 710 aa8.77□□□□□ -1.01
HDAC8-211ENST00000415409 ANKARQ7Z5J8 1434 aa8.77□□□□□ -1.01
HDAC8-211ENST00000415409 TTC21BQ7Z4L5 1316 aa8.77□□□□□ -1.01
HDAC8-211ENST00000415409 ANKRD13DQ6ZTN6 518 aa8.76□□□□□ -1.01
HDAC8-211ENST00000415409 NME9Q86XW9 330 aa8.76□□□□□ -1.01
HDAC8-211ENST00000415409 SALL2Q9Y467 1007 aaPredicted RBP8.76□□□□□ -1.01
HDAC8-211ENST00000415409 SMG6Q86US8 1419 aaKnown RBP8.76□□□□□ -1.01
HDAC8-211ENST00000415409 CDC42BPGQ6DT37 1551 aa8.75□□□□□ -1.01
HDAC8-211ENST00000415409 PROSER2Q86WR7 435 aaPredicted RBP8.75□□□□□ -1.01
HDAC8-211ENST00000415409 HS6ST3Q8IZP7 471 aa8.75□□□□□ -1.01
HDAC8-211ENST00000415409 PMFBP1Q8TBY8 1022 aa8.75□□□□□ -1.01
HDAC8-211ENST00000415409 PCDHGA4Q9Y5G9 962 aa8.75□□□□□ -1.01
HDAC8-211ENST00000415409 TTC21AQ8NDW8 1320 aa8.75□□□□□ -1.01
HDAC8-211ENST00000415409 SENP3-EIF4A1A0A087X0R7 540 aa8.74□□□□□ -1.01
HDAC8-211ENST00000415409 DIAPH1O60610 1272 aaKnown RBP8.74□□□□□ -1.01
HDAC8-211ENST00000415409 U2AF1L5P0DN76 240 aaPredicted RBP8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms