RNA–Protein interactions for RNA: ENST00000414862.5

TRA2B-204, Transcript of transformer 2 beta homolog, humanhuman

TSL 3

Gene TRA2B, Length 710 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-204ENST00000414862 USP17L8P0C7I0 530 aa13.07□□□□□ -0.32
TRA2B-204ENST00000414862 POGZQ7Z3K3 1410 aa13.06□□□□□ -0.32
TRA2B-204ENST00000414862 PRXQ9BXM0 1461 aa13.06□□□□□ -0.32
TRA2B-204ENST00000414862 SNRKQ9NRH2 765 aa13.06□□□□□ -0.32
TRA2B-204ENST00000414862 FANCAO15360 1455 aa13.05□□□□□ -0.32
TRA2B-204ENST00000414862 DXOO77932 396 aaKnown RBP13.05□□□□□ -0.32
TRA2B-204ENST00000414862 LYPD8Q6UX82 237 aa13.05□□□□□ -0.32
TRA2B-204ENST00000414862 RIMS1Q86UR5 1692 aaKnown RBP13.05□□□□□ -0.32
TRA2B-204ENST00000414862 DENND4BO75064 1496 aaPredicted RBP13.04□□□□□ -0.32
TRA2B-204ENST00000414862 PER1O15534 1290 aaPredicted RBP13.04□□□□□ -0.32
TRA2B-204ENST00000414862 S1PR4O95977 384 aa13.04□□□□□ -0.32
TRA2B-204ENST00000414862 MMP16P51512 607 aa13.04□□□□□ -0.32
TRA2B-204ENST00000414862 HSPA2P54652 639 aa13.04□□□□□ -0.32
TRA2B-204ENST00000414862 MCM6Q14566 821 aa13.04□□□□□ -0.32
TRA2B-204ENST00000414862 AKNAQ7Z591 1439 aa13.04□□□□□ -0.32
TRA2B-204ENST00000414862 LRRN4Q8WUT4 740 aa13.03□□□□□ -0.32
TRA2B-204ENST00000414862 RAPGEF6Q8TEU7 1601 aa13.02□□□□□ -0.33
TRA2B-204ENST00000414862 PTPRNQ16849 979 aa13.01□□□□□ -0.33
TRA2B-204ENST00000414862 CFAP74Q9C0B2 1584 aa13.01□□□□□ -0.33
TRA2B-204ENST00000414862 FHOD3Q2V2M9 1422 aa13□□□□□ -0.33
TRA2B-204ENST00000414862 MTMR14Q8NCE2 650 aa13□□□□□ -0.33
TRA2B-204ENST00000414862 SAMD9Q5K651 1589 aa12.99□□□□□ -0.33
TRA2B-204ENST00000414862 EFCAB5A4FU69 1503 aa12.99□□□□□ -0.33
TRA2B-204ENST00000414862 ZMYM4Q5VZL5 1548 aa12.99□□□□□ -0.33
TRA2B-204ENST00000414862 ZFYVE16Q7Z3T8 1539 aa12.99□□□□□ -0.33
TRA2B-204ENST00000414862 DISP3Q9P2K9 1392 aa12.99□□□□□ -0.33
TRA2B-204ENST00000414862 NUP153P49790 1475 aaKnown RBP12.98□□□□□ -0.33
TRA2B-204ENST00000414862 NUDT12Q9BQG2 462 aa12.98□□□□□ -0.33
TRA2B-204ENST00000414862 HMX1Q9NP08 348 aaPredicted RBP12.98□□□□□ -0.33
TRA2B-204ENST00000414862 RICTORQ6R327 1708 aa12.97□□□□□ -0.33
TRA2B-204ENST00000414862 GGCXP38435 758 aa12.97□□□□□ -0.33
TRA2B-204ENST00000414862 C14orf37Q86TY3 774 aa12.97□□□□□ -0.33
TRA2B-204ENST00000414862 PLSCR2Q9NRY7 297 aa12.97□□□□□ -0.33
TRA2B-204ENST00000414862 PLA2G2EQ9NZK7 142 aa12.97□□□□□ -0.33
TRA2B-204ENST00000414862 MAGI2Q86UL8 1455 aa12.97□□□□□ -0.33
TRA2B-204ENST00000414862 SOCS7O14512 581 aa12.96□□□□□ -0.33
TRA2B-204ENST00000414862 CCNYL3P0C7X3 344 aa12.96□□□□□ -0.33
TRA2B-204ENST00000414862 IFFO2Q5TF58 517 aa12.96□□□□□ -0.33
TRA2B-204ENST00000414862 APBB1O00213 710 aa12.95□□□□□ -0.34
TRA2B-204ENST00000414862 PPP1R18Q6NYC8 613 aa12.95□□□□□ -0.34
TRA2B-204ENST00000414862 CCDC24Q8N4L8 307 aa12.95□□□□□ -0.34
TRA2B-204ENST00000414862 EVA1BQ9NVM1 165 aa12.95□□□□□ -0.34
TRA2B-204ENST00000414862 FCF1Q9Y324 198 aaKnown RBP12.95□□□□□ -0.34
TRA2B-204ENST00000414862 YEATS2Q9ULM3 1422 aa12.95□□□□□ -0.34
TRA2B-204ENST00000414862 TTC37Q6PGP7 1564 aa12.94□□□□□ -0.34
TRA2B-204ENST00000414862 PLEKHD1A6NEE1 506 aa12.94□□□□□ -0.34
TRA2B-204ENST00000414862 PPEF1O14829 653 aaPredicted RBP12.94□□□□□ -0.34
TRA2B-204ENST00000414862 UBTFP17480 764 aaKnown RBP12.94□□□□□ -0.34
TRA2B-204ENST00000414862 MLECQ14165 292 aa12.94□□□□□ -0.34
TRA2B-204ENST00000414862 ERICH6Q7L0X2 663 aa12.94□□□□□ -0.34
TRA2B-204ENST00000414862 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.94□□□□□ -0.34
TRA2B-204ENST00000414862 RNF223E7ERA6 249 aa12.93□□□□□ -0.34
TRA2B-204ENST00000414862 F12P00748 615 aaPredicted RBP12.93□□□□□ -0.34
TRA2B-204ENST00000414862 CTHP32929 405 aa12.93□□□□□ -0.34
TRA2B-204ENST00000414862 NR6A1Q15406 480 aa12.93□□□□□ -0.34
TRA2B-204ENST00000414862 GJD4Q96KN9 370 aaPredicted RBP12.93□□□□□ -0.34
TRA2B-204ENST00000414862 TRIM34Q9BYJ4 488 aa12.93□□□□□ -0.34
TRA2B-204ENST00000414862 MAP10Q9P2G4 905 aa12.93□□□□□ -0.34
TRA2B-204ENST00000414862 FER1L4A9Z1Z3 1794 aa12.92□□□□□ -0.34
TRA2B-204ENST00000414862 EPS8L1Q8TE68 723 aa12.92□□□□□ -0.34
TRA2B-204ENST00000414862 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.92□□□□□ -0.34
TRA2B-204ENST00000414862 KCNH2Q12809 1159 aa12.91□□□□□ -0.34
TRA2B-204ENST00000414862 TIMELESSQ9UNS1 1208 aa12.91□□□□□ -0.34
TRA2B-204ENST00000414862 ILDR2Q71H61 639 aa12.9□□□□□ -0.34
TRA2B-204ENST00000414862 PRM3Q9NNZ6 103 aa12.9□□□□□ -0.34
TRA2B-204ENST00000414862 SPATA31D1Q6ZQQ2 1576 aa12.9□□□□□ -0.35
TRA2B-204ENST00000414862 C9orf84Q5VXU9 1444 aa12.89□□□□□ -0.35
TRA2B-204ENST00000414862 ARHGEF12Q9NZN5 1544 aa12.89□□□□□ -0.35
TRA2B-204ENST00000414862 HECW1Q76N89 1606 aa12.89□□□□□ -0.35
TRA2B-204ENST00000414862 ANKLE1Q8NAG6 615 aa12.89□□□□□ -0.35
TRA2B-204ENST00000414862 PREX1Q8TCU6 1659 aa12.89□□□□□ -0.35
TRA2B-204ENST00000414862 UHRF1BP1Q6BDS2 1440 aa12.88□□□□□ -0.35
TRA2B-204ENST00000414862 SIGLEC1Q9BZZ2 1709 aa12.88□□□□□ -0.35
TRA2B-204ENST00000414862 RAD21O60216 631 aa12.88□□□□□ -0.35
TRA2B-204ENST00000414862 PTCRAQ6ISU1 281 aaPredicted RBP12.88□□□□□ -0.35
TRA2B-204ENST00000414862 POM121Q96HA1 1249 aa12.88□□□□□ -0.35
TRA2B-204ENST00000414862 SCAPERQ9BY12 1400 aa12.88□□□□□ -0.35
TRA2B-204ENST00000414862 RANGAP1P46060 587 aaPredicted RBP12.87□□□□□ -0.35
TRA2B-204ENST00000414862 CLUAP1Q96AJ1 413 aa12.87□□□□□ -0.35
TRA2B-204ENST00000414862 GDPD2Q9HCC8 539 aa12.87□□□□□ -0.35
TRA2B-204ENST00000414862 TBC1D2BQ9UPU7 963 aa12.87□□□□□ -0.35
TRA2B-204ENST00000414862 COG6Q9Y2V7 657 aa12.87□□□□□ -0.35
TRA2B-204ENST00000414862 NDUFB9Q9Y6M9 179 aa12.87□□□□□ -0.35
TRA2B-204ENST00000414862 ATP10AO60312 1499 aa12.86□□□□□ -0.35
TRA2B-204ENST00000414862 ZMYND15Q9H091 742 aa12.85□□□□□ -0.35
TRA2B-204ENST00000414862 PLA2G2CQ5R387 149 aa12.84□□□□□ -0.35
TRA2B-204ENST00000414862 PNMA1Q8ND90 353 aa12.84□□□□□ -0.35
TRA2B-204ENST00000414862 UNC93B1Q9H1C4 597 aa12.84□□□□□ -0.35
TRA2B-204ENST00000414862 PLCH2O75038 1416 aa12.84□□□□□ -0.35
TRA2B-204ENST00000414862 A0A0G2JS52 829 aa12.83□□□□□ -0.36
TRA2B-204ENST00000414862 FKBPLQ9UIM3 349 aa12.83□□□□□ -0.36
TRA2B-204ENST00000414862 ZBTB24O43167 697 aaPredicted RBP12.82□□□□□ -0.36
TRA2B-204ENST00000414862 ABL2P42684 1182 aa12.82□□□□□ -0.36
TRA2B-204ENST00000414862 ARMC2Q8NEN0 867 aa12.82□□□□□ -0.36
TRA2B-204ENST00000414862 ZNF518AQ6AHZ1 1483 aa12.82□□□□□ -0.36
TRA2B-204ENST00000414862 CDK13Q14004 1512 aaKnown RBP12.82□□□□□ -0.36
TRA2B-204ENST00000414862 A6NJR5 290 aa12.81□□□□□ -0.36
TRA2B-204ENST00000414862 CEBPAP49715 358 aaPredicted RBP12.81□□□□□ -0.36
TRA2B-204ENST00000414862 PTPRTO14522 1441 aa12.8□□□□□ -0.36
TRA2B-204ENST00000414862 EFCAB2Q5VUJ9 269 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms