RNA–Protein interactions for RNA: ENST00000414174.1

SF3B1-203, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 593 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-203ENST00000414174 KRTAP9-6A0A140TA67 174 aa5.57□□□□□ -1.52
SF3B1-203ENST00000414174 NR3C2P08235 984 aa5.57□□□□□ -1.52
SF3B1-203ENST00000414174 FDX1P10109 184 aa5.57□□□□□ -1.52
SF3B1-203ENST00000414174 NDUFV2P19404 249 aa5.57□□□□□ -1.52
SF3B1-203ENST00000414174 CDK11BP21127 795 aaKnown RBP5.57□□□□□ -1.52
SF3B1-203ENST00000414174 TTLL12Q14166 644 aaPredicted RBP5.57□□□□□ -1.52
SF3B1-203ENST00000414174 CCDC155Q8N6L0 562 aa5.57□□□□□ -1.52
SF3B1-203ENST00000414174 CHMP4AQ9BY43 222 aa5.57□□□□□ -1.52
SF3B1-203ENST00000414174 SLC35F4A4IF30 521 aa5.56□□□□□ -1.52
SF3B1-203ENST00000414174 MOXD2PA6NHM9 499 aa5.56□□□□□ -1.52
SF3B1-203ENST00000414174 TTLL8A6PVC2 850 aa5.56□□□□□ -1.52
SF3B1-203ENST00000414174 ARID5BQ14865 1188 aa5.56□□□□□ -1.52
SF3B1-203ENST00000414174 DCAF5Q96JK2 942 aa5.56□□□□□ -1.52
SF3B1-203ENST00000414174 SPDYE5A6NIY4 337 aa5.55□□□□□ -1.52
SF3B1-203ENST00000414174 SV2AQ7L0J3 742 aa5.55□□□□□ -1.52
SF3B1-203ENST00000414174 VWA5B2Q8N398 1253 aa5.55□□□□□ -1.52
SF3B1-203ENST00000414174 AK7Q96M32 723 aa5.55□□□□□ -1.52
SF3B1-203ENST00000414174 SLC24A3Q9HC58 644 aa5.55□□□□□ -1.52
SF3B1-203ENST00000414174 ENAMQ9NRM1 1142 aa5.55□□□□□ -1.52
SF3B1-203ENST00000414174 PHF20L1A8MW92 1017 aa5.54□□□□□ -1.52
SF3B1-203ENST00000414174 ITGB2P05107 769 aa5.54□□□□□ -1.52
SF3B1-203ENST00000414174 BRD2P25440 801 aaKnown RBP5.54□□□□□ -1.52
SF3B1-203ENST00000414174 SRSF11Q05519 484 aaKnown RBP5.54□□□□□ -1.52
SF3B1-203ENST00000414174 LYPD4Q6UWN0 246 aa5.54□□□□□ -1.52
SF3B1-203ENST00000414174 PRR7Q8TB68 274 aa5.54□□□□□ -1.52
SF3B1-203ENST00000414174 FOXJ1Q92949 421 aa5.54□□□□□ -1.52
SF3B1-203ENST00000414174 BEGAINQ9BUH8 593 aa5.54□□□□□ -1.52
SF3B1-203ENST00000414174 SHROOM4Q9ULL8 1493 aa5.53□□□□□ -1.52
SF3B1-203ENST00000414174 ADAMTS2O95450 1211 aa5.53□□□□□ -1.52
SF3B1-203ENST00000414174 PROCP04070 461 aa5.53□□□□□ -1.52
SF3B1-203ENST00000414174 HSP90B1P14625 803 aaKnown RBP5.53□□□□□ -1.52
SF3B1-203ENST00000414174 ITGA6P23229 1130 aa5.53□□□□□ -1.52
SF3B1-203ENST00000414174 MAP3K10Q02779 954 aa5.53□□□□□ -1.52
SF3B1-203ENST00000414174 PDE4DQ08499 809 aa5.53□□□□□ -1.52
SF3B1-203ENST00000414174 Q8N3U1 123 aa5.53□□□□□ -1.52
SF3B1-203ENST00000414174 BEND7Q8N7W2 519 aaPredicted RBP5.53□□□□□ -1.52
SF3B1-203ENST00000414174 TBC1D2Q9BYX2 928 aa5.53□□□□□ -1.52
SF3B1-203ENST00000414174 K7ELQ4 463 aaPredicted RBP5.52□□□□□ -1.53
SF3B1-203ENST00000414174 CELA2BP08218 269 aaPredicted RBP5.52□□□□□ -1.53
SF3B1-203ENST00000414174 RSBN1LQ6PCB5 846 aaPredicted RBP5.52□□□□□ -1.53
SF3B1-203ENST00000414174 LYPD8Q6UX82 237 aa5.52□□□□□ -1.53
SF3B1-203ENST00000414174 PCDHB15Q9Y5E8 787 aa5.52□□□□□ -1.53
SF3B1-203ENST00000414174 EMILIN1Q9Y6C2 1016 aa5.52□□□□□ -1.53
SF3B1-203ENST00000414174 FIGNL2A6NMB9 653 aa5.51□□□□□ -1.53
SF3B1-203ENST00000414174 PDE4CQ08493 712 aa5.51□□□□□ -1.53
SF3B1-203ENST00000414174 TAF7LQ5H9L4 462 aa5.51□□□□□ -1.53
SF3B1-203ENST00000414174 BPHLQ86WA6 291 aaPredicted RBP5.51□□□□□ -1.53
SF3B1-203ENST00000414174 SPINT1O43278 529 aa5.5□□□□□ -1.53
SF3B1-203ENST00000414174 NEFLP07196 543 aa5.5□□□□□ -1.53
SF3B1-203ENST00000414174 CTHP32929 405 aa5.5□□□□□ -1.53
SF3B1-203ENST00000414174 MTMR2Q13614 643 aa5.5□□□□□ -1.53
SF3B1-203ENST00000414174 C4orf48Q5BLP8 95 aa5.5□□□□□ -1.53
SF3B1-203ENST00000414174 MAP4K5Q9Y4K4 846 aa5.5□□□□□ -1.53
SF3B1-203ENST00000414174 CNTNAP5Q8WYK1 1306 aa5.49□□□□□ -1.53
SF3B1-203ENST00000414174 CFAP99D6REC4 459 aa5.49□□□□□ -1.53
SF3B1-203ENST00000414174 Q6ZVU0 165 aa5.49□□□□□ -1.53
SF3B1-203ENST00000414174 KRTAP1-3Q8IUG1 177 aa5.49□□□□□ -1.53
SF3B1-203ENST00000414174 GALNT6Q8NCL4 622 aa5.49□□□□□ -1.53
SF3B1-203ENST00000414174 LIMD1Q9UGP4 676 aa5.49□□□□□ -1.53
SF3B1-203ENST00000414174 CCDC9Q9Y3X0 531 aaKnown RBP5.49□□□□□ -1.53
SF3B1-203ENST00000414174 CDC14CA4D256 554 aa5.48□□□□□ -1.53
SF3B1-203ENST00000414174 GJA5P36382 358 aa5.48□□□□□ -1.53
SF3B1-203ENST00000414174 MYSM1Q5VVJ2 828 aa5.48□□□□□ -1.53
SF3B1-203ENST00000414174 CABLES1Q8TDN4 633 aa5.48□□□□□ -1.53
SF3B1-203ENST00000414174 C1QTNF2Q9BXJ5 285 aa5.48□□□□□ -1.53
SF3B1-203ENST00000414174 F12P00748 615 aaPredicted RBP5.47□□□□□ -1.53
SF3B1-203ENST00000414174 AGERQ15109 404 aa5.47□□□□□ -1.53
SF3B1-203ENST00000414174 QPCTQ16769 361 aa5.47□□□□□ -1.53
SF3B1-203ENST00000414174 FBXO31Q5XUX0 539 aaPredicted RBP5.47□□□□□ -1.53
SF3B1-203ENST00000414174 TRMT44Q8IYL2 757 aaKnown RBP5.47□□□□□ -1.53
SF3B1-203ENST00000414174 CCDC116Q8IYX3 515 aa5.47□□□□□ -1.53
SF3B1-203ENST00000414174 LRRC4BQ9NT99 713 aa5.47□□□□□ -1.53
SF3B1-203ENST00000414174 RIC3Q7Z5B4 369 aa5.46□□□□□ -1.54
SF3B1-203ENST00000414174 PODNQ7Z5L7 613 aa5.46□□□□□ -1.54
SF3B1-203ENST00000414174 SH3RF1Q7Z6J0 888 aa5.46□□□□□ -1.54
SF3B1-203ENST00000414174 PUS7Q96PZ0 661 aaKnown RBP5.46□□□□□ -1.54
SF3B1-203ENST00000414174 GPBP1L1Q9HC44 474 aaPredicted RBP5.46□□□□□ -1.54
SF3B1-203ENST00000414174 IGSF3O75054 1194 aa5.45□□□□□ -1.54
SF3B1-203ENST00000414174 FSHRP23945 695 aa5.45□□□□□ -1.54
SF3B1-203ENST00000414174 BAG6P46379 1132 aa5.45□□□□□ -1.54
SF3B1-203ENST00000414174 CSPP1Q1MSJ5 1256 aa5.45□□□□□ -1.54
SF3B1-203ENST00000414174 VASH1Q7L8A9 365 aaPredicted RBP5.45□□□□□ -1.54
SF3B1-203ENST00000414174 ARMC2Q8NEN0 867 aa5.45□□□□□ -1.54
SF3B1-203ENST00000414174 PGPEP1Q9NXJ5 209 aa5.45□□□□□ -1.54
SF3B1-203ENST00000414174 SENP3-EIF4A1A0A087X0R7 540 aa5.44□□□□□ -1.54
SF3B1-203ENST00000414174 PER1O15534 1290 aaPredicted RBP5.44□□□□□ -1.54
SF3B1-203ENST00000414174 GAS6Q14393 721 aa5.44□□□□□ -1.54
SF3B1-203ENST00000414174 ALYREFQ86V81 257 aaKnown RBP5.44□□□□□ -1.54
SF3B1-203ENST00000414174 GMCL1Q96IK5 515 aa5.44□□□□□ -1.54
SF3B1-203ENST00000414174 LILRB3O75022 631 aa5.43□□□□□ -1.54
SF3B1-203ENST00000414174 BCRP11274 1271 aa5.43□□□□□ -1.54
SF3B1-203ENST00000414174 CBLBQ13191 982 aa5.43□□□□□ -1.54
SF3B1-203ENST00000414174 RTL5Q5HYW3 569 aaPredicted RBP5.43□□□□□ -1.54
SF3B1-203ENST00000414174 MAP10Q9P2G4 905 aa5.43□□□□□ -1.54
SF3B1-203ENST00000414174 DIXDC1Q155Q3 683 aa5.42□□□□□ -1.54
SF3B1-203ENST00000414174 TUSC1Q2TAM9 212 aa5.42□□□□□ -1.54
SF3B1-203ENST00000414174 PPP1R26Q5T8A7 1209 aaPredicted RBP5.42□□□□□ -1.54
SF3B1-203ENST00000414174 PRPF38BQ5VTL8 546 aaKnown RBP5.42□□□□□ -1.54
SF3B1-203ENST00000414174 DHX37Q8IY37 1157 aaKnown RBP5.42□□□□□ -1.54
SF3B1-203ENST00000414174 NEDD1Q8NHV4 660 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms