RNA–Protein interactions for RNA: ENST00000412587.5

PBRM1-209, Transcript of polybromo 1, humanhuman

TSL 1 (best)

Gene PBRM1, Length 4,766 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-209ENST00000412587 CCDC30Q5VVM6 783 aa10.16□□□□□ -0.78
PBRM1-209ENST00000412587 NOL10Q9BSC4 688 aaKnown RBP10.16□□□□□ -0.78
PBRM1-209ENST00000412587 HSP90AB3PQ58FF7 597 aa10.15□□□□□ -0.78
PBRM1-209ENST00000412587 PPP6R1Q9UPN7 881 aa10.15□□□□□ -0.78
PBRM1-209ENST00000412587 DHX29Q7Z478 1369 aaKnown RBP10.15□□□□□ -0.78
PBRM1-209ENST00000412587 UBTFL1P0CB47 393 aaPredicted RBP10.15□□□□□ -0.78
PBRM1-209ENST00000412587 TOM1L2Q6ZVM7 507 aa10.15□□□□□ -0.78
PBRM1-209ENST00000412587 PNISRQ8TF01 805 aaKnown RBP10.15□□□□□ -0.78
PBRM1-209ENST00000412587 REC8O95072 547 aa10.15□□□□□ -0.78
PBRM1-209ENST00000412587 ZNF530Q6P9A1 599 aaPredicted RBP10.15□□□□□ -0.78
PBRM1-209ENST00000412587 TXLNBQ8N3L3 684 aa10.15□□□□□ -0.78
PBRM1-209ENST00000412587 MYCBPQ99417 103 aaPredicted RBP10.15□□□□□ -0.78
PBRM1-209ENST00000412587 ATP6V1DQ9Y5K8 247 aa10.15□□□□□ -0.78
PBRM1-209ENST00000412587 GPATCH8Q9UKJ3 1502 aaKnown RBP10.15□□□□□ -0.78
PBRM1-209ENST00000412587 GOLGA6L19H0YKK7 550 aa10.15□□□□□ -0.79
PBRM1-209ENST00000412587 IGSF3O75054 1194 aa10.15□□□□□ -0.79
PBRM1-209ENST00000412587 TWISTNBQ3B726 338 aaPredicted RBP10.15□□□□□ -0.79
PBRM1-209ENST00000412587 FOXD4L5Q5VV16 416 aaPredicted RBP10.15□□□□□ -0.79
PBRM1-209ENST00000412587 FAM184AQ8NB25 1140 aa10.15□□□□□ -0.79
PBRM1-209ENST00000412587 FOXD4L4Q8WXT5 416 aaPredicted RBP10.15□□□□□ -0.79
PBRM1-209ENST00000412587 ATP10BO94823 1461 aa10.15□□□□□ -0.79
PBRM1-209ENST00000412587 ADGRF5Q8IZF2 1346 aa10.14□□□□□ -0.79
PBRM1-209ENST00000412587 CCDC91Q7Z6B0 441 aa10.14□□□□□ -0.79
PBRM1-209ENST00000412587 NOC3LQ8WTT2 800 aaKnown RBP10.14□□□□□ -0.79
PBRM1-209ENST00000412587 WDR97A6NE52 1622 aa10.14□□□□□ -0.79
PBRM1-209ENST00000412587 THOC2Q8NI27 1593 aaKnown RBP10.14□□□□□ -0.79
PBRM1-209ENST00000412587 RRS1Q15050 365 aaKnown RBP10.14□□□□□ -0.79
PBRM1-209ENST00000412587 LNPKQ9C0E8 428 aa10.14□□□□□ -0.79
PBRM1-209ENST00000412587 VPS37DQ86XT2 251 aa10.14□□□□□ -0.79
PBRM1-209ENST00000412587 CCDC34Q96HJ3 373 aa10.14□□□□□ -0.79
PBRM1-209ENST00000412587 GNAI3P08754 354 aa10.13□□□□□ -0.79
PBRM1-209ENST00000412587 NUTM2BA6NNL0 878 aaPredicted RBP10.13□□□□□ -0.79
PBRM1-209ENST00000412587 NUTM2EB1AL46 878 aaPredicted RBP10.13□□□□□ -0.79
PBRM1-209ENST00000412587 RBM25P49756 843 aaKnown RBP10.13□□□□□ -0.79
PBRM1-209ENST00000412587 NUTM2AQ8IVF1 878 aaPredicted RBP10.13□□□□□ -0.79
PBRM1-209ENST00000412587 NSD3Q9BZ95 1437 aa10.13□□□□□ -0.79
PBRM1-209ENST00000412587 PRPF40AO75400 957 aaKnown RBP10.13□□□□□ -0.79
PBRM1-209ENST00000412587 ZKSCAN1P17029 563 aaPredicted RBP10.13□□□□□ -0.79
PBRM1-209ENST00000412587 HOMER1Q86YM7 354 aa10.13□□□□□ -0.79
PBRM1-209ENST00000412587 CCAR2Q8N163 923 aaKnown RBP10.13□□□□□ -0.79
PBRM1-209ENST00000412587 RBM42Q9BTD8 480 aaKnown RBP10.13□□□□□ -0.79
PBRM1-209ENST00000412587 CREBRFQ8IUR6 639 aa10.13□□□□□ -0.79
PBRM1-209ENST00000412587 TSR2Q969E8 191 aaKnown RBP10.13□□□□□ -0.79
PBRM1-209ENST00000412587 CHMP4CQ96CF2 233 aa10.13□□□□□ -0.79
PBRM1-209ENST00000412587 CLSTN1O94985 981 aa10.12□□□□□ -0.79
PBRM1-209ENST00000412587 HDGFL1Q5TGJ6 251 aa10.12□□□□□ -0.79
PBRM1-209ENST00000412587 AMOTL2Q9Y2J4 779 aa10.12□□□□□ -0.79
PBRM1-209ENST00000412587 ASXL2Q76L83 1435 aa10.12□□□□□ -0.79
PBRM1-209ENST00000412587 ZC3H6P61129 1189 aaKnown RBP10.12□□□□□ -0.79
PBRM1-209ENST00000412587 DDX54Q8TDD1 881 aaKnown RBP10.12□□□□□ -0.79
PBRM1-209ENST00000412587 NOL7Q9UMY1 257 aaKnown RBP10.12□□□□□ -0.79
PBRM1-209ENST00000412587 SPG7Q9UQ90 795 aa10.12□□□□□ -0.79
PBRM1-209ENST00000412587 PLCH2O75038 1416 aa10.12□□□□□ -0.79
PBRM1-209ENST00000412587 PLCD4Q9BRC7 762 aa10.11□□□□□ -0.79
PBRM1-209ENST00000412587 TBC1D2Q9BYX2 928 aa10.11□□□□□ -0.79
PBRM1-209ENST00000412587 FAM107BQ9H098 131 aa10.11□□□□□ -0.79
PBRM1-209ENST00000412587 NINLQ9Y2I6 1382 aa10.11□□□□□ -0.79
PBRM1-209ENST00000412587 ERC2O15083 957 aa10.11□□□□□ -0.79
PBRM1-209ENST00000412587 FCHSD2O94868 740 aa10.11□□□□□ -0.79
PBRM1-209ENST00000412587 CT47A1Q5JQC4 288 aaPredicted RBP10.11□□□□□ -0.79
PBRM1-209ENST00000412587 NEUROD6Q96NK8 337 aa10.11□□□□□ -0.79
PBRM1-209ENST00000412587 CABP4P57796 275 aa10.11□□□□□ -0.79
PBRM1-209ENST00000412587 WDR63Q8IWG1 891 aa10.11□□□□□ -0.79
PBRM1-209ENST00000412587 KCNH5Q8NCM2 988 aa10.11□□□□□ -0.79
PBRM1-209ENST00000412587 ANO2Q9NQ90 1003 aa10.11□□□□□ -0.79
PBRM1-209ENST00000412587 BMS1Q14692 1282 aaKnown RBP10.1□□□□□ -0.79
PBRM1-209ENST00000412587 CPLX2Q6PUV4 134 aaKnown RBP10.1□□□□□ -0.79
PBRM1-209ENST00000412587 CNPY4Q8N129 248 aa10.1□□□□□ -0.79
PBRM1-209ENST00000412587 MYRIPQ8NFW9 859 aa10.1□□□□□ -0.79
PBRM1-209ENST00000412587 RASSF8Q8NHQ8 419 aa10.1□□□□□ -0.79
PBRM1-209ENST00000412587 SYNE3Q6ZMZ3 975 aa10.1□□□□□ -0.79
PBRM1-209ENST00000412587 NUP153P49790 1475 aaKnown RBP10.1□□□□□ -0.79
PBRM1-209ENST00000412587 RAPGEF6Q8TEU7 1601 aa10.1□□□□□ -0.79
PBRM1-209ENST00000412587 BECN2A8MW95 431 aa10.1□□□□□ -0.79
PBRM1-209ENST00000412587 SF3A1Q15459 793 aaKnown RBP10.1□□□□□ -0.79
PBRM1-209ENST00000412587 AMOTL1Q8IY63 956 aa10.1□□□□□ -0.79
PBRM1-209ENST00000412587 SLC4A2P04920 1241 aa10.1□□□□□ -0.79
PBRM1-209ENST00000412587 CERS3Q8IU89 383 aa10.1□□□□□ -0.79
PBRM1-209ENST00000412587 PIP4K2BP78356 416 aa10.09□□□□□ -0.79
PBRM1-209ENST00000412587 RBM33Q96EV2 1170 aaKnown RBP10.09□□□□□ -0.79
PBRM1-209ENST00000412587 H3BQV1 296 aa10.09□□□□□ -0.79
PBRM1-209ENST00000412587 SURF6O75683 361 aaKnown RBP10.09□□□□□ -0.79
PBRM1-209ENST00000412587 AKAP17AQ02040 695 aaKnown RBP10.09□□□□□ -0.79
PBRM1-209ENST00000412587 TTC31Q49AM3 519 aaPredicted RBP10.09□□□□□ -0.79
PBRM1-209ENST00000412587 IFFO2Q5TF58 517 aa10.09□□□□□ -0.79
PBRM1-209ENST00000412587 TMCO3Q6UWJ1 677 aa10.09□□□□□ -0.79
PBRM1-209ENST00000412587 CLASRPQ8N2M8 674 aaKnown RBP10.09□□□□□ -0.79
PBRM1-209ENST00000412587 PAIP2Q9BPZ3 127 aaKnown RBP10.09□□□□□ -0.79
PBRM1-209ENST00000412587 WASLO00401 505 aaPredicted RBP10.09□□□□□ -0.79
PBRM1-209ENST00000412587 PDE3AQ14432 1141 aa10.09□□□□□ -0.79
PBRM1-209ENST00000412587 NOLC1Q14978 699 aaKnown RBP eCLIP10.09□□□□□ -0.79
PBRM1-209ENST00000412587 KLHL40Q2TBA0 621 aa10.09□□□□□ -0.79
PBRM1-209ENST00000412587 DNAAF4Q8WXU2 420 aa10.09□□□□□ -0.79
PBRM1-209ENST00000412587 ERCC4Q92889 916 aaPredicted RBP10.09□□□□□ -0.79
PBRM1-209ENST00000412587 PHF8Q9UPP1 1060 aa10.09□□□□□ -0.79
PBRM1-209ENST00000412587 NOS1P29475 1434 aa10.09□□□□□ -0.79
PBRM1-209ENST00000412587 CCDC184Q52MB2 194 aa10.09□□□□□ -0.79
PBRM1-209ENST00000412587 INTS3Q68E01 1043 aaKnown RBP10.09□□□□□ -0.79
PBRM1-209ENST00000412587 KIF6Q6ZMV9 814 aa10.09□□□□□ -0.79
PBRM1-209ENST00000412587 EFCC1Q9HA90 598 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 8.1 ms