RNA–Protein interactions for RNA: ENST00000409872.1

ITGB6-203, Transcript of integrin subunit beta 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ITGB6, Length 2,501 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB6-203ENST00000409872 PRAM1Q96QH2 718 aa12.84□□□□□ -0.35
ITGB6-203ENST00000409872 COG6Q9Y2V7 657 aa12.84□□□□□ -0.35
ITGB6-203ENST00000409872 DDX49Q9Y6V7 483 aaKnown RBP12.84□□□□□ -0.35
ITGB6-203ENST00000409872 SRPK2P78362 688 aaKnown RBP12.83□□□□□ -0.36
ITGB6-203ENST00000409872 PCDHB15Q9Y5E8 787 aa12.83□□□□□ -0.36
ITGB6-203ENST00000409872 MYO3AQ8NEV4 1616 aa12.83□□□□□ -0.36
ITGB6-203ENST00000409872 PREX1Q8TCU6 1659 aa12.83□□□□□ -0.36
ITGB6-203ENST00000409872 DMRT2Q9Y5R5 561 aa12.83□□□□□ -0.36
ITGB6-203ENST00000409872 EVC2Q86UK5 1308 aa12.82□□□□□ -0.36
ITGB6-203ENST00000409872 MFAP1P55081 439 aaKnown RBP12.82□□□□□ -0.36
ITGB6-203ENST00000409872 KIAA2012Q0VF49 1180 aa12.82□□□□□ -0.36
ITGB6-203ENST00000409872 NEUROD2Q15784 382 aa12.81□□□□□ -0.36
ITGB6-203ENST00000409872 PANK1Q8TE04 598 aa12.81□□□□□ -0.36
ITGB6-203ENST00000409872 TMEM131LA2VDJ0 1609 aa12.81□□□□□ -0.36
ITGB6-203ENST00000409872 KIF16BQ96L93 1317 aa12.81□□□□□ -0.36
ITGB6-203ENST00000409872 BAG4O95429 457 aaKnown RBP12.81□□□□□ -0.36
ITGB6-203ENST00000409872 ZSCAN23Q3MJ62 389 aa12.81□□□□□ -0.36
ITGB6-203ENST00000409872 CHMP4BQ9H444 224 aaKnown RBP12.81□□□□□ -0.36
ITGB6-203ENST00000409872 REREQ9P2R6 1566 aa12.8□□□□□ -0.36
ITGB6-203ENST00000409872 MTHFSP49914 203 aa12.8□□□□□ -0.36
ITGB6-203ENST00000409872 HDAC1Q13547 482 aaPredicted RBP12.8□□□□□ -0.36
ITGB6-203ENST00000409872 WAPLQ7Z5K2 1190 aa12.8□□□□□ -0.36
ITGB6-203ENST00000409872 FEZ1Q99689 392 aa12.8□□□□□ -0.36
ITGB6-203ENST00000409872 RRP7AQ9Y3A4 280 aaKnown RBP12.8□□□□□ -0.36
ITGB6-203ENST00000409872 TULP4Q9NRJ4 1543 aa12.8□□□□□ -0.36
ITGB6-203ENST00000409872 ZC3H13Q5T200 1668 aaKnown RBP12.8□□□□□ -0.36
ITGB6-203ENST00000409872 K7ELQ4 463 aaPredicted RBP12.8□□□□□ -0.36
ITGB6-203ENST00000409872 ZNF710Q8N1W2 664 aa12.8□□□□□ -0.36
ITGB6-203ENST00000409872 RBSNQ9H1K0 784 aa12.8□□□□□ -0.36
ITGB6-203ENST00000409872 ARHGEF28Q8N1W1 1705 aaKnown RBP12.79□□□□□ -0.36
ITGB6-203ENST00000409872 NUCB2P80303 420 aa12.79□□□□□ -0.36
ITGB6-203ENST00000409872 GGNBP2Q9H3C7 697 aa12.78□□□□□ -0.36
ITGB6-203ENST00000409872 CLTCQ00610 1675 aaKnown RBP12.78□□□□□ -0.36
ITGB6-203ENST00000409872 RARSP54136 660 aaKnown RBP12.78□□□□□ -0.36
ITGB6-203ENST00000409872 GABPB1Q06547 395 aaPredicted RBP12.78□□□□□ -0.36
ITGB6-203ENST00000409872 LRSAM1Q6UWE0 723 aa12.77□□□□□ -0.37
ITGB6-203ENST00000409872 KIF3AQ9Y496 699 aa12.77□□□□□ -0.37
ITGB6-203ENST00000409872 HOMEZQ8IX15 550 aa12.77□□□□□ -0.37
ITGB6-203ENST00000409872 ZFYVE9O95405 1425 aa12.76□□□□□ -0.37
ITGB6-203ENST00000409872 YTHDC2Q9H6S0 1430 aaKnown RBP12.76□□□□□ -0.37
ITGB6-203ENST00000409872 FAM193AP78312 1265 aa12.76□□□□□ -0.37
ITGB6-203ENST00000409872 CBX1P83916 185 aa12.76□□□□□ -0.37
ITGB6-203ENST00000409872 PIBF1Q8WXW3 757 aa12.76□□□□□ -0.37
ITGB6-203ENST00000409872 CYP2E1P05181 493 aaPredicted RBP12.76□□□□□ -0.37
ITGB6-203ENST00000409872 FBLN1P23142 703 aa12.76□□□□□ -0.37
ITGB6-203ENST00000409872 LMBRD1Q9NUN5 540 aa12.76□□□□□ -0.37
ITGB6-203ENST00000409872 A0A1W2PP64 1363 aa12.75□□□□□ -0.37
ITGB6-203ENST00000409872 MVPQ14764 893 aaKnown RBP12.75□□□□□ -0.37
ITGB6-203ENST00000409872 ATP2B3Q16720 1220 aa12.75□□□□□ -0.37
ITGB6-203ENST00000409872 KIF2CQ99661 725 aa12.75□□□□□ -0.37
ITGB6-203ENST00000409872 CDK19Q9BWU1 502 aa12.75□□□□□ -0.37
ITGB6-203ENST00000409872 ESF1Q9H501 851 aaKnown RBP12.75□□□□□ -0.37
ITGB6-203ENST00000409872 PTPRMP28827 1452 aa12.75□□□□□ -0.37
ITGB6-203ENST00000409872 SSFA2P28290 1259 aa12.75□□□□□ -0.37
ITGB6-203ENST00000409872 CABP1Q9NZU7 370 aa12.75□□□□□ -0.37
ITGB6-203ENST00000409872 ANKRD36BQ8N2N9 1353 aa12.74□□□□□ -0.37
ITGB6-203ENST00000409872 PRIM1P49642 420 aaKnown RBP12.74□□□□□ -0.37
ITGB6-203ENST00000409872 ANKRD7Q92527 254 aa12.74□□□□□ -0.37
ITGB6-203ENST00000409872 SPTLC3Q9NUV7 552 aa12.74□□□□□ -0.37
ITGB6-203ENST00000409872 POLR3AO14802 1390 aaPredicted RBP12.74□□□□□ -0.37
ITGB6-203ENST00000409872 CT47B1P0C2W7 299 aaPredicted RBP12.73□□□□□ -0.37
ITGB6-203ENST00000409872 SYCP1Q15431 976 aa12.73□□□□□ -0.37
ITGB6-203ENST00000409872 CWC22Q9HCG8 908 aaKnown RBP12.73□□□□□ -0.37
ITGB6-203ENST00000409872 A2ML1A8K2U0 1454 aa12.73□□□□□ -0.37
ITGB6-203ENST00000409872 CAVIN1Q6NZI2 390 aaKnown RBP12.73□□□□□ -0.37
ITGB6-203ENST00000409872 WDR63Q8IWG1 891 aa12.73□□□□□ -0.37
ITGB6-203ENST00000409872 FTSJ3Q8IY81 847 aaKnown RBP12.73□□□□□ -0.37
ITGB6-203ENST00000409872 DNAJC2Q99543 621 aaKnown RBP12.73□□□□□ -0.37
ITGB6-203ENST00000409872 OGFRQ9NZT2 677 aa12.73□□□□□ -0.37
ITGB6-203ENST00000409872 ALKQ9UM73 1620 aa12.73□□□□□ -0.37
ITGB6-203ENST00000409872 TULP1O00294 542 aaPredicted RBP12.72□□□□□ -0.37
ITGB6-203ENST00000409872 WWC1Q8IX03 1113 aa12.72□□□□□ -0.37
ITGB6-203ENST00000409872 PDCL2Q8N4E4 241 aa12.72□□□□□ -0.37
ITGB6-203ENST00000409872 TCP11L2Q8N4U5 519 aa12.72□□□□□ -0.37
ITGB6-203ENST00000409872 PHF23Q9BUL5 403 aaPredicted RBP12.72□□□□□ -0.37
ITGB6-203ENST00000409872 CCDC66A2RUB6 948 aa12.72□□□□□ -0.37
ITGB6-203ENST00000409872 FYB1O15117 783 aa12.72□□□□□ -0.37
ITGB6-203ENST00000409872 CDK11BP21127 795 aaKnown RBP12.72□□□□□ -0.37
ITGB6-203ENST00000409872 CEBPAP49715 358 aaPredicted RBP12.72□□□□□ -0.37
ITGB6-203ENST00000409872 FKBP5Q13451 457 aaPredicted RBP12.72□□□□□ -0.37
ITGB6-203ENST00000409872 UVSSAQ2YD98 709 aa12.72□□□□□ -0.37
ITGB6-203ENST00000409872 SAMD1Q6SPF0 538 aaPredicted RBP12.72□□□□□ -0.37
ITGB6-203ENST00000409872 TXNDC2Q86VQ3 553 aa12.72□□□□□ -0.37
ITGB6-203ENST00000409872 CFAP44Q96MT7 982 aa12.72□□□□□ -0.37
ITGB6-203ENST00000409872 RIMS2Q9UQ26 1411 aa12.72□□□□□ -0.37
ITGB6-203ENST00000409872 U2AF1L5P0DN76 240 aaPredicted RBP12.71□□□□□ -0.37
ITGB6-203ENST00000409872 U2AF1Q01081 240 aaKnown RBP eCLIP12.71□□□□□ -0.37
ITGB6-203ENST00000409872 BMP2KLQ5H9B9 411 aa12.71□□□□□ -0.37
ITGB6-203ENST00000409872 CREBRFQ8IUR6 639 aa12.71□□□□□ -0.37
ITGB6-203ENST00000409872 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.71□□□□□ -0.37
ITGB6-203ENST00000409872 DIAPH3Q9NSV4 1193 aa12.71□□□□□ -0.37
ITGB6-203ENST00000409872 AGLP35573 1532 aa12.71□□□□□ -0.37
ITGB6-203ENST00000409872 NCKAP5LQ9HCH0 1330 aa12.71□□□□□ -0.37
ITGB6-203ENST00000409872 RLBP1P12271 317 aa12.71□□□□□ -0.37
ITGB6-203ENST00000409872 ZNF830Q96NB3 372 aaPredicted RBP12.71□□□□□ -0.37
ITGB6-203ENST00000409872 PPP6R1Q9UPN7 881 aa12.71□□□□□ -0.37
ITGB6-203ENST00000409872 IQSEC2Q5JU85 1478 aa12.71□□□□□ -0.38
ITGB6-203ENST00000409872 MBD3O95983 291 aa12.7□□□□□ -0.38
ITGB6-203ENST00000409872 TSPYL1Q9H0U9 437 aa12.7□□□□□ -0.38
ITGB6-203ENST00000409872 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms