RNA–Protein interactions for RNA: ENST00000409129.2

NIF3L1-203, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 813 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-203ENST00000409129 SSH2Q76I76 1423 aa13.28□□□□□ -0.28
NIF3L1-203ENST00000409129 ITSN1Q15811 1721 aa13.27□□□□□ -0.28
NIF3L1-203ENST00000409129 SHANK3Q9BYB0 1731 aa13.27□□□□□ -0.28
NIF3L1-203ENST00000409129 NUTM2GQ5VZR2 741 aa13.27□□□□□ -0.29
NIF3L1-203ENST00000409129 GOLGB1Q14789 3259 aaKnown RBP13.26□□□□□ -0.29
NIF3L1-203ENST00000409129 ZC3H6P61129 1189 aaKnown RBP13.26□□□□□ -0.29
NIF3L1-203ENST00000409129 KIAA1210Q9ULL0 1709 aa13.26□□□□□ -0.29
NIF3L1-203ENST00000409129 LARP1Q6PKG0 1096 aaKnown RBP13.25□□□□□ -0.29
NIF3L1-203ENST00000409129 ABTB2Q8N961 1025 aa13.25□□□□□ -0.29
NIF3L1-203ENST00000409129 SYT17Q9BSW7 474 aa13.25□□□□□ -0.29
NIF3L1-203ENST00000409129 SRPK2P78362 688 aaKnown RBP13.24□□□□□ -0.29
NIF3L1-203ENST00000409129 BARGINQ6ZT62 677 aa13.24□□□□□ -0.29
NIF3L1-203ENST00000409129 CENPJQ9HC77 1338 aaPredicted RBP13.23□□□□□ -0.29
NIF3L1-203ENST00000409129 EVA1CP58658 441 aa13.23□□□□□ -0.29
NIF3L1-203ENST00000409129 SAMD1Q6SPF0 538 aaPredicted RBP13.23□□□□□ -0.29
NIF3L1-203ENST00000409129 TOPAZ1Q8N9V7 1692 aa13.22□□□□□ -0.29
NIF3L1-203ENST00000409129 GIGYF1O75420 1035 aaPredicted RBP13.22□□□□□ -0.29
NIF3L1-203ENST00000409129 PROM2Q8N271 834 aa13.22□□□□□ -0.29
NIF3L1-203ENST00000409129 CABP2Q9NPB3 220 aa13.22□□□□□ -0.29
NIF3L1-203ENST00000409129 NLRP13Q86W25 1043 aa13.21□□□□□ -0.29
NIF3L1-203ENST00000409129 TCP11L2Q8N4U5 519 aa13.21□□□□□ -0.29
NIF3L1-203ENST00000409129 BCL11BQ9C0K0 894 aaPredicted RBP13.21□□□□□ -0.29
NIF3L1-203ENST00000409129 RGPD5Q99666 1765 aa13.21□□□□□ -0.29
NIF3L1-203ENST00000409129 OVOS2A0A0G2JMS6 1433 aa13.21□□□□□ -0.3
NIF3L1-203ENST00000409129 OVOS2A0A0J9YW53 1432 aa13.21□□□□□ -0.3
NIF3L1-203ENST00000409129 OVOS2Q6IE36 1432 aa13.21□□□□□ -0.3
NIF3L1-203ENST00000409129 PPIP5K1Q6PFW1 1433 aa13.21□□□□□ -0.3
NIF3L1-203ENST00000409129 USP19O94966 1318 aa13.2□□□□□ -0.3
NIF3L1-203ENST00000409129 GCP02774 474 aa13.2□□□□□ -0.3
NIF3L1-203ENST00000409129 L3MBTL2Q969R5 705 aa13.2□□□□□ -0.3
NIF3L1-203ENST00000409129 KAT6BQ8WYB5 2073 aa13.2□□□□□ -0.3
NIF3L1-203ENST00000409129 CPDO75976 1380 aa13.2□□□□□ -0.3
NIF3L1-203ENST00000409129 SGIP1Q9BQI5 828 aa13.19□□□□□ -0.3
NIF3L1-203ENST00000409129 CABP1Q9NZU7 370 aa13.19□□□□□ -0.3
NIF3L1-203ENST00000409129 BRD4O60885 1362 aaPredicted RBP13.19□□□□□ -0.3
NIF3L1-203ENST00000409129 PLSCR1O15162 318 aa13.18□□□□□ -0.3
NIF3L1-203ENST00000409129 TUBGCP6Q96RT7 1819 aa13.18□□□□□ -0.3
NIF3L1-203ENST00000409129 COL5A2P05997 1499 aaPredicted RBP13.17□□□□□ -0.3
NIF3L1-203ENST00000409129 SIN3AQ96ST3 1273 aa13.17□□□□□ -0.3
NIF3L1-203ENST00000409129 PAPPAQ13219 1627 aa13.17□□□□□ -0.3
NIF3L1-203ENST00000409129 NLRP6P59044 892 aa13.16□□□□□ -0.3
NIF3L1-203ENST00000409129 POTEHQ6S545 545 aa13.16□□□□□ -0.3
NIF3L1-203ENST00000409129 THRAP3Q9Y2W1 955 aaKnown RBP13.16□□□□□ -0.3
NIF3L1-203ENST00000409129 EVC2Q86UK5 1308 aa13.15□□□□□ -0.3
NIF3L1-203ENST00000409129 USP6P35125 1406 aa13.14□□□□□ -0.31
NIF3L1-203ENST00000409129 ZBTB7CA1YPR0 619 aa13.14□□□□□ -0.31
NIF3L1-203ENST00000409129 NEUROD1Q13562 356 aa13.14□□□□□ -0.31
NIF3L1-203ENST00000409129 GPR162Q16538 588 aa13.14□□□□□ -0.31
NIF3L1-203ENST00000409129 MTFR1LQ9H019 292 aa13.14□□□□□ -0.31
NIF3L1-203ENST00000409129 STK32BQ9NY57 414 aa13.14□□□□□ -0.31
NIF3L1-203ENST00000409129 QRICH2Q9H0J4 1663 aa13.14□□□□□ -0.31
NIF3L1-203ENST00000409129 COL18A1P39060 1754 aa13.14□□□□□ -0.31
NIF3L1-203ENST00000409129 COL24A1Q17RW2 1714 aa13.13□□□□□ -0.31
NIF3L1-203ENST00000409129 BTAF1O14981 1849 aa13.13□□□□□ -0.31
NIF3L1-203ENST00000409129 SLC15A2Q16348 729 aa13.13□□□□□ -0.31
NIF3L1-203ENST00000409129 PELP1Q8IZL8 1130 aaKnown RBP13.13□□□□□ -0.31
NIF3L1-203ENST00000409129 ARXQ96QS3 562 aa13.13□□□□□ -0.31
NIF3L1-203ENST00000409129 ZNF692Q9BU19 519 aaPredicted RBP13.13□□□□□ -0.31
NIF3L1-203ENST00000409129 CRB1P82279 1406 aa13.13□□□□□ -0.31
NIF3L1-203ENST00000409129 NHSQ6T4R5 1651 aa13.12□□□□□ -0.31
NIF3L1-203ENST00000409129 AATKQ6ZMQ8 1374 aa13.12□□□□□ -0.31
NIF3L1-203ENST00000409129 TXNRD1Q16881 649 aa13.12□□□□□ -0.31
NIF3L1-203ENST00000409129 KLHL34Q8N239 644 aa13.12□□□□□ -0.31
NIF3L1-203ENST00000409129 ROCK2O75116 1388 aaKnown RBP13.11□□□□□ -0.31
NIF3L1-203ENST00000409129 MARCH10Q8NA82 808 aaPredicted RBP13.11□□□□□ -0.31
NIF3L1-203ENST00000409129 QSER1Q2KHR3 1735 aa13.1□□□□□ -0.31
NIF3L1-203ENST00000409129 TRPM1Q7Z4N2 1603 aa13.1□□□□□ -0.31
NIF3L1-203ENST00000409129 MAP3K5Q99683 1374 aa13.1□□□□□ -0.31
NIF3L1-203ENST00000409129 SLIT3O75094 1523 aa13.1□□□□□ -0.31
NIF3L1-203ENST00000409129 C11orf95C9JLR9 678 aaPredicted RBP13.1□□□□□ -0.31
NIF3L1-203ENST00000409129 DDB1Q16531 1140 aa13.1□□□□□ -0.31
NIF3L1-203ENST00000409129 TTC21BQ7Z4L5 1316 aa13.1□□□□□ -0.31
NIF3L1-203ENST00000409129 TOM1L2Q6ZVM7 507 aa13.09□□□□□ -0.31
NIF3L1-203ENST00000409129 AXIN2Q9Y2T1 843 aa13.09□□□□□ -0.31
NIF3L1-203ENST00000409129 ARHGEF25Q86VW2 580 aa13.08□□□□□ -0.32
NIF3L1-203ENST00000409129 KCNH5Q8NCM2 988 aa13.08□□□□□ -0.32
NIF3L1-203ENST00000409129 NLGN2Q8NFZ4 835 aa13.08□□□□□ -0.32
NIF3L1-203ENST00000409129 TTC21AQ8NDW8 1320 aa13.08□□□□□ -0.32
NIF3L1-203ENST00000409129 PIK3C2AO00443 1686 aa13.07□□□□□ -0.32
NIF3L1-203ENST00000409129 WDR17Q8IZU2 1322 aa13.07□□□□□ -0.32
NIF3L1-203ENST00000409129 CPSF1Q10570 1443 aaKnown RBP13.06□□□□□ -0.32
NIF3L1-203ENST00000409129 ATP10DQ9P241 1426 aa13.06□□□□□ -0.32
NIF3L1-203ENST00000409129 ZNF827Q17R98 1081 aa13.06□□□□□ -0.32
NIF3L1-203ENST00000409129 KTN1Q86UP2 1357 aaKnown RBP13.06□□□□□ -0.32
NIF3L1-203ENST00000409129 SOX12O15370 315 aa13.05□□□□□ -0.32
NIF3L1-203ENST00000409129 YBX3P16989 372 aaKnown RBP eCLIP13.05□□□□□ -0.324e-6■□□□□ 11.2
NIF3L1-203ENST00000409129 CDCA7Q9BWT1 371 aaPredicted RBP13.05□□□□□ -0.32
NIF3L1-203ENST00000409129 SPINK5Q9NQ38 1064 aaPredicted RBP13.05□□□□□ -0.32
NIF3L1-203ENST00000409129 BCL9O00512 1426 aa13.05□□□□□ -0.32
NIF3L1-203ENST00000409129 CSB-PGBD3P0DP91 1061 aa13.04□□□□□ -0.32
NIF3L1-203ENST00000409129 CARD10Q9BWT7 1032 aa13.04□□□□□ -0.32
NIF3L1-203ENST00000409129 HSPA6P17066 643 aa13.03□□□□□ -0.32
NIF3L1-203ENST00000409129 CARD11Q9BXL7 1154 aa13.03□□□□□ -0.32
NIF3L1-203ENST00000409129 SBNO2Q9Y2G9 1366 aa13.03□□□□□ -0.32
NIF3L1-203ENST00000409129 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.02□□□□□ -0.33
NIF3L1-203ENST00000409129 ZNF526Q8TF50 670 aaPredicted RBP13.02□□□□□ -0.33
NIF3L1-203ENST00000409129 ACSBG1Q96GR2 724 aa13.02□□□□□ -0.33
NIF3L1-203ENST00000409129 EXOC5O00471 708 aa13.01□□□□□ -0.33
NIF3L1-203ENST00000409129 NFAT5O94916 1531 aa13□□□□□ -0.33
NIF3L1-203ENST00000409129 USP31Q70CQ4 1352 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms