RNA–Protein interactions for RNA: ENST00000409006.3

KDELR3-202, Transcript of KDEL endoplasmic reticulum protein retention receptor 3, humanhuman

TSL 1 (best) BASIC

Gene KDELR3, Length 931 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3-202ENST00000409006 TRIM37O94972 964 aa31.81■■■□□ 2.68
KDELR3-202ENST00000409006 NME9Q86XW9 330 aa31.81■■■□□ 2.68
KDELR3-202ENST00000409006 USP31Q70CQ4 1352 aa31.8■■■□□ 2.68
KDELR3-202ENST00000409006 LTN1O94822 1766 aa31.79■■■□□ 2.68
KDELR3-202ENST00000409006 TOM1L2Q6ZVM7 507 aa31.79■■■□□ 2.68
KDELR3-202ENST00000409006 LRRC37A3O60309 1634 aa31.78■■■□□ 2.68
KDELR3-202ENST00000409006 DISP2A7MBM2 1401 aa31.78■■■□□ 2.68
KDELR3-202ENST00000409006 A0A1W2PP64 1363 aa31.78■■■□□ 2.68
KDELR3-202ENST00000409006 WDR17Q8IZU2 1322 aa31.77■■■□□ 2.68
KDELR3-202ENST00000409006 HDGFL2Q7Z4V5 671 aaPredicted RBP31.77■■■□□ 2.68
KDELR3-202ENST00000409006 PUS7Q96PZ0 661 aaKnown RBP31.77■■■□□ 2.68
KDELR3-202ENST00000409006 SRCAPQ6ZRS2 3230 aa31.76■■■□□ 2.67
KDELR3-202ENST00000409006 PEAK1Q9H792 1746 aa31.75■■■□□ 2.67
KDELR3-202ENST00000409006 EDC4Q6P2E9 1401 aaKnown RBP31.75■■■□□ 2.67
KDELR3-202ENST00000409006 EZH2Q15910 746 aaKnown RBP31.74■■■□□ 2.67
KDELR3-202ENST00000409006 SBF2Q86WG5 1849 aa31.73■■■□□ 2.67
KDELR3-202ENST00000409006 TERF2IPQ9NYB0 399 aa31.72■■■□□ 2.67
KDELR3-202ENST00000409006 PSDA5PKW4 1024 aaPredicted RBP31.71■■■□□ 2.67
KDELR3-202ENST00000409006 CAMKK2Q96RR4 588 aa31.71■■■□□ 2.67
KDELR3-202ENST00000409006 ABCC6O95255 1503 aa31.7■■■□□ 2.67
KDELR3-202ENST00000409006 USP47Q96K76 1375 aa31.69■■■□□ 2.66
KDELR3-202ENST00000409006 APBA3O96018 575 aa31.69■■■□□ 2.66
KDELR3-202ENST00000409006 CSB-PGBD3P0DP91 1061 aa31.68■■■□□ 2.66
KDELR3-202ENST00000409006 DDB1Q16531 1140 aa31.67■■■□□ 2.66
KDELR3-202ENST00000409006 CARD10Q9BWT7 1032 aa31.67■■■□□ 2.66
KDELR3-202ENST00000409006 PCGF6Q9BYE7 350 aa31.67■■■□□ 2.66
KDELR3-202ENST00000409006 RREB1Q92766 1687 aa31.67■■■□□ 2.66
KDELR3-202ENST00000409006 OVOS2A0A0J9YW53 1432 aa31.66■■■□□ 2.66
KDELR3-202ENST00000409006 OVOS2Q6IE36 1432 aa31.66■■■□□ 2.66
KDELR3-202ENST00000409006 NINLQ9Y2I6 1382 aa31.65■■■□□ 2.66
KDELR3-202ENST00000409006 OVOS2A0A0G2JMS6 1433 aa31.64■■■□□ 2.66
KDELR3-202ENST00000409006 NUP188Q5SRE5 1749 aa31.63■■■□□ 2.65
KDELR3-202ENST00000409006 SLC24A1O60721 1099 aa31.61■■■□□ 2.65
KDELR3-202ENST00000409006 MARCH10Q8NA82 808 aaPredicted RBP31.61■■■□□ 2.65
KDELR3-202ENST00000409006 R3HDM1Q15032 1099 aaKnown RBP31.6■■■□□ 2.65
KDELR3-202ENST00000409006 LRP5O75197 1615 aa31.6■■■□□ 2.65
KDELR3-202ENST00000409006 ERBB3P21860 1342 aa31.59■■■□□ 2.65
KDELR3-202ENST00000409006 CDCA7Q9BWT1 371 aaPredicted RBP31.59■■■□□ 2.65
KDELR3-202ENST00000409006 CCDC7Q96M83 1385 aa31.58■■■□□ 2.65
KDELR3-202ENST00000409006 TMF1P82094 1093 aa31.58■■■□□ 2.65
KDELR3-202ENST00000409006 PTF1AQ7RTS3 328 aa31.58■■■□□ 2.65
KDELR3-202ENST00000409006 PARD3Q8TEW0 1356 aa31.57■■■□□ 2.64
KDELR3-202ENST00000409006 ANKRD36BQ8N2N9 1353 aa31.56■■■□□ 2.64
KDELR3-202ENST00000409006 FBLN1P23142 703 aa31.55■■■□□ 2.64
KDELR3-202ENST00000409006 CLSPNQ9HAW4 1339 aa31.54■■■□□ 2.64
KDELR3-202ENST00000409006 C11orf95C9JLR9 678 aaPredicted RBP31.54■■■□□ 2.64
KDELR3-202ENST00000409006 ANKRD24Q8TF21 1146 aa31.54■■■□□ 2.64
KDELR3-202ENST00000409006 TIMELESSQ9UNS1 1208 aa31.54■■■□□ 2.64
KDELR3-202ENST00000409006 NLRP2Q9NX02 1062 aa31.53■■■□□ 2.64
KDELR3-202ENST00000409006 MYOM1P52179 1685 aa31.51■■■□□ 2.64
KDELR3-202ENST00000409006 RGPD3A6NKT7 1758 aaPredicted RBP31.51■■■□□ 2.64
KDELR3-202ENST00000409006 RGPD4Q7Z3J3 1758 aa31.51■■■□□ 2.64
KDELR3-202ENST00000409006 EXOC5O00471 708 aa31.51■■■□□ 2.63
KDELR3-202ENST00000409006 COG3Q96JB2 828 aa31.51■■■□□ 2.63
KDELR3-202ENST00000409006 RGPD2P0DJD1 1756 aa31.51■■■□□ 2.63
KDELR3-202ENST00000409006 BCL9O00512 1426 aa31.49■■■□□ 2.63
KDELR3-202ENST00000409006 TNS2Q63HR2 1409 aa31.49■■■□□ 2.63
KDELR3-202ENST00000409006 IP6K1Q92551 441 aa31.49■■■□□ 2.63
KDELR3-202ENST00000409006 KIF20BQ96Q89 1820 aa31.48■■■□□ 2.63
KDELR3-202ENST00000409006 BCL11BQ9C0K0 894 aaPredicted RBP31.48■■■□□ 2.63
KDELR3-202ENST00000409006 FAM208AQ9UK61 1670 aaKnown RBP31.47■■■□□ 2.63
KDELR3-202ENST00000409006 MAP3K19Q56UN5 1328 aa31.47■■■□□ 2.63
KDELR3-202ENST00000409006 FYB1O15117 783 aa31.46■■■□□ 2.63
KDELR3-202ENST00000409006 LTV1Q96GA3 475 aaPredicted RBP31.45■■■□□ 2.63
KDELR3-202ENST00000409006 GGNBP2Q9H3C7 697 aa31.45■■■□□ 2.63
KDELR3-202ENST00000409006 PLSCR1O15162 318 aa31.44■■■□□ 2.62
KDELR3-202ENST00000409006 IL2RBP14784 551 aa31.44■■■□□ 2.62
KDELR3-202ENST00000409006 KAT6BQ8WYB5 2073 aa31.42■■■□□ 2.62
KDELR3-202ENST00000409006 HOXC9P31274 260 aa31.42■■■□□ 2.62
KDELR3-202ENST00000409006 CDCA8Q53HL2 280 aa31.42■■■□□ 2.62
KDELR3-202ENST00000409006 NHSQ6T4R5 1651 aa31.41■■■□□ 2.62
KDELR3-202ENST00000409006 NBPF14Q5TI25 921 aa31.4■■■□□ 2.62
KDELR3-202ENST00000409006 KCNQ2O43526 872 aa31.39■■■□□ 2.62
KDELR3-202ENST00000409006 AMPHP49418 695 aa31.39■■■□□ 2.62
KDELR3-202ENST00000409006 RRS1Q15050 365 aaKnown RBP31.39■■■□□ 2.62
KDELR3-202ENST00000409006 PROM2Q8N271 834 aa31.39■■■□□ 2.62
KDELR3-202ENST00000409006 CARD14Q9BXL6 1004 aa31.39■■■□□ 2.62
KDELR3-202ENST00000409006 ACSBG1Q96GR2 724 aa31.36■■■□□ 2.61
KDELR3-202ENST00000409006 BTAF1O14981 1849 aa31.34■■■□□ 2.61
KDELR3-202ENST00000409006 CCER1Q8TC90 406 aaPredicted RBP31.34■■■□□ 2.61
KDELR3-202ENST00000409006 SHANK3Q9BYB0 1731 aa31.33■■■□□ 2.61
KDELR3-202ENST00000409006 ANO8Q9HCE9 1232 aaPredicted RBP31.33■■■□□ 2.61
KDELR3-202ENST00000409006 NSD3Q9BZ95 1437 aa31.32■■■□□ 2.61
KDELR3-202ENST00000409006 RTL1A6NKG5 1358 aa31.31■■■□□ 2.6
KDELR3-202ENST00000409006 TXNRD1Q16881 649 aa31.29■■■□□ 2.6
KDELR3-202ENST00000409006 CASZ1Q86V15 1759 aa31.28■■■□□ 2.6
KDELR3-202ENST00000409006 NBPF6Q5VWK0 638 aa31.27■■■□□ 2.6
KDELR3-202ENST00000409006 DDX54Q8TDD1 881 aaKnown RBP31.27■■■□□ 2.6
KDELR3-202ENST00000409006 NBPF4Q96M43 638 aa31.27■■■□□ 2.6
KDELR3-202ENST00000409006 MEGF6O75095 1541 aa31.27■■■□□ 2.6
KDELR3-202ENST00000409006 HSP90AB2PQ58FF8 381 aa31.25■■■□□ 2.59
KDELR3-202ENST00000409006 POLR3GLQ9BT43 218 aa31.25■■■□□ 2.59
KDELR3-202ENST00000409006 MAP2P11137 1827 aaKnown RBP31.25■■■□□ 2.59
KDELR3-202ENST00000409006 USHBP1Q8N6Y0 703 aa31.24■■■□□ 2.59
KDELR3-202ENST00000409006 HSPA5P11021 654 aaKnown RBP31.23■■■□□ 2.59
KDELR3-202ENST00000409006 PDGFDQ9GZP0 370 aaPredicted RBP31.23■■■□□ 2.59
KDELR3-202ENST00000409006 DOT1LQ8TEK3 1739 aa31.23■■■□□ 2.59
KDELR3-202ENST00000409006 INSRP06213 1382 aa31.21■■■□□ 2.59
KDELR3-202ENST00000409006 EIF4G2P78344 907 aaKnown RBP eCLIP31.21■■■□□ 2.59
KDELR3-202ENST00000409006 FLT4P35916 1363 aa31.2■■■□□ 2.59
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms